Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt21d04
(129 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 89 5e-19
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 89 5e-19
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 88 7e-19
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 88 7e-19
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 88 7e-19
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 88 7e-19
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 88 7e-19
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 88 7e-19
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 88 7e-19
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 88 7e-19
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 85 7e-18
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 71 9e-14
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 62 7e-11
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 47 2e-06
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 40 2e-04
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 33 0.021
Z68317-3|CAA92687.1| 599|Caenorhabditis elegans Hypothetical pr... 30 0.26
Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical pr... 29 0.34
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 28 0.80
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 28 0.80
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 28 0.80
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 28 0.80
AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical... 27 1.4
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 27 2.4
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 26 3.2
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 26 4.2
AF164625-1|AAD47816.1| 944|Caenorhabditis elegans tandem-array-... 26 4.2
AF077537-8|AAC26277.1| 226|Caenorhabditis elegans Hypothetical ... 26 4.2
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 26 4.2
AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array ... 26 4.2
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z82070-7|CAB04909.1| 321|Caenorhabditis elegans Hypothetical pr... 25 5.6
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 25 5.6
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 25 5.6
AF016655-12|AAK31438.3| 1143|Caenorhabditis elegans Guanylyl cyc... 25 5.6
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 25 5.6
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 25 5.6
AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical ... 25 5.6
Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein. 25 7.4
Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z79598-1|CAB01867.3| 586|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z74035-3|CAA98481.1| 808|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical pr... 25 7.4
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 25 7.4
AF040654-7|AAK21450.2| 362|Caenorhabditis elegans Hypothetical ... 25 7.4
AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical ... 25 7.4
Z96047-4|CAB09414.1| 796|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z82070-6|CAB04910.1| 321|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z81560-8|CAN86623.1| 173|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z81560-7|CAB76737.2| 188|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z81470-1|CAB03881.1| 321|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z75533-3|CAA99822.1| 868|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical pr... 25 9.8
U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore co... 25 9.8
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 25 9.8
U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical pr... 25 9.8
AF047662-4|AAC04444.1| 145|Caenorhabditis elegans Hypothetical ... 25 9.8
AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical... 25 9.8
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 88.6 bits (210), Expect = 5e-19
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = +1
Query: 1 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 126
VLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDL
Sbjct: 140 VLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDL 181
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 88.6 bits (210), Expect = 5e-19
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = +1
Query: 1 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 126
VLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDL
Sbjct: 140 VLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDL 181
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 88.2 bits (209), Expect = 7e-19
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = +1
Query: 1 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 126
VLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDL
Sbjct: 140 VLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDL 181
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 88.2 bits (209), Expect = 7e-19
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = +1
Query: 1 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 126
VLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDL
Sbjct: 140 VLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDL 181
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 88.2 bits (209), Expect = 7e-19
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = +1
Query: 1 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 126
VLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDL
Sbjct: 140 VLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDL 181
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 88.2 bits (209), Expect = 7e-19
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = +1
Query: 1 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 126
VLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDL
Sbjct: 140 VLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDL 181
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 88.2 bits (209), Expect = 7e-19
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = +1
Query: 1 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 126
VLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDL
Sbjct: 140 VLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDL 181
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 88.2 bits (209), Expect = 7e-19
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = +1
Query: 1 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 126
VLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDL
Sbjct: 96 VLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDL 137
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 88.2 bits (209), Expect = 7e-19
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = +1
Query: 1 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 126
VLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDL
Sbjct: 126 VLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDL 167
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 88.2 bits (209), Expect = 7e-19
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = +1
Query: 1 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 126
VLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDL
Sbjct: 140 VLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDL 181
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 85.0 bits (201), Expect = 7e-18
Identities = 39/42 (92%), Positives = 41/42 (97%)
Frame = +1
Query: 1 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 126
VLSLYASGRTTGIVLD+GDGV+HTVPIYEGYALPHAI RLDL
Sbjct: 139 VLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDL 180
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 71.3 bits (167), Expect = 9e-14
Identities = 31/42 (73%), Positives = 38/42 (90%)
Frame = +1
Query: 1 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 126
VLSLYA+GRTTG+VLDSGDGV+H VPI +G+A+ HAI R+DL
Sbjct: 143 VLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDL 184
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 61.7 bits (143), Expect = 7e-11
Identities = 26/42 (61%), Positives = 33/42 (78%)
Frame = +1
Query: 1 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 126
VL+LYA G TG+V+DSGDGV+H P+YEG+AL H RLD+
Sbjct: 143 VLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDI 184
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 46.8 bits (106), Expect = 2e-06
Identities = 18/39 (46%), Positives = 30/39 (76%)
Frame = +1
Query: 1 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 117
VLS +A GRT G+++DSG + VP+++GYA+ HA+++
Sbjct: 162 VLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVVK 200
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 39.9 bits (89), Expect = 2e-04
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +1
Query: 31 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 126
TG+V+DSGDGV+H +P+ +GY + I + +
Sbjct: 171 TGLVIDSGDGVTHCIPVADGYVIGSCIKHIPI 202
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 33.5 bits (73), Expect = 0.021
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +1
Query: 4 LSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 111
L LYA TTG+V+D G+ V + VP+ +GY + AI
Sbjct: 313 LILYAYDVTTGVVVDIGERV-NIVPVIDGYVVESAI 347
>Z68317-3|CAA92687.1| 599|Caenorhabditis elegans Hypothetical
protein T01H3.3 protein.
Length = 599
Score = 29.9 bits (64), Expect = 0.26
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 20 PVVPPVSCWTPATVSPTPCPSTRDTHSPTP 109
P++PP PA V T P+TR+T P P
Sbjct: 97 PILPPTE--KPAPVITTETPTTRETEKPVP 124
>Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical
protein R09E10.9 protein.
Length = 443
Score = 29.5 bits (63), Expect = 0.34
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = +2
Query: 20 PVVPPVSCWT--PATVSPTPCPSTRDTHSPTPSC 115
P VPP T P TVS P PS PT SC
Sbjct: 370 PTVPPSMIQTVNPPTVSALPSPSVSPAPVPTTSC 403
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 28.3 bits (60), Expect = 0.80
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 5 SRCTRPVVPPVSCWTPATVSPTPCPSTRDT 94
S T P VPPV+ TP T + T +T T
Sbjct: 671 SPTTAPTVPPVTTTTPTTTTSTTTTTTTTT 700
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 14 TRPVVPPVSCWTPATVSPTPCPSTRDTHSP 103
T P P V+ TP+T++PT P T+ P
Sbjct: 705 TTPTTPVVT--TPSTITPTTRPVTQPASQP 732
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 29 PPVSCWTPATVSPTPCPSTRDTHSPTPS 112
PP + P T PTP P+T +T P+
Sbjct: 480 PPTTVTVPTT--PTPVPTTTNTPPANPT 505
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 28.3 bits (60), Expect = 0.80
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 5 SRCTRPVVPPVSCWTPATVSPTPCPSTRDT 94
S T P VPPV+ TP T + T +T T
Sbjct: 727 SPTTAPTVPPVTTTTPTTTTSTTTTTTTTT 756
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 14 TRPVVPPVSCWTPATVSPTPCPSTRDTHSP 103
T P P V+ TP+T++PT P T+ P
Sbjct: 761 TTPTTPVVT--TPSTITPTTRPVTQPASQP 788
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 29 PPVSCWTPATVSPTPCPSTRDTHSPTPS 112
PP + P T PTP P+T +T P+
Sbjct: 480 PPTTVTVPTT--PTPVPTTTNTPPANPT 505
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 28.3 bits (60), Expect = 0.80
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 5 SRCTRPVVPPVSCWTPATVSPTPCPSTRDT 94
S T P VPPV+ TP T + T +T T
Sbjct: 550 SPTTAPTVPPVTTTTPTTTTSTTTTTTTTT 579
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 14 TRPVVPPVSCWTPATVSPTPCPSTRDTHSP 103
T P P V+ TP+T++PT P T+ P
Sbjct: 584 TTPTTPVVT--TPSTITPTTRPVTQPASQP 611
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 29 PPVSCWTPATVSPTPCPSTRDTHSPTPS 112
PP + P T PTP P+T +T P+
Sbjct: 480 PPTTVTVPTT--PTPVPTTTNTPPANPT 505
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 28.3 bits (60), Expect = 0.80
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +2
Query: 14 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 112
T PP S TP + T P T T SP+ S
Sbjct: 221 TTSTEPPSSSTTPVQTTTTTAPETTSTESPSSS 253
Score = 28.3 bits (60), Expect = 0.80
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +2
Query: 14 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 112
T PP S TP + T P T T SP+ S
Sbjct: 497 TTSTEPPSSSTTPVQTTTTTAPETTSTESPSSS 529
Score = 27.1 bits (57), Expect = 1.8
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 14 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 112
T PP S TP + T P T T +P+ S
Sbjct: 83 TTSTEPPSSSTTPVQTTTTTAPETTSTEAPSSS 115
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +2
Query: 14 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 112
T PP S TP + T P T T P+ S
Sbjct: 198 TTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSS 230
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +2
Query: 14 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 112
T PP S TP + T P T T P+ S
Sbjct: 267 TTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSS 299
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +2
Query: 14 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 112
T PP S TP + T P T T P+ S
Sbjct: 313 TTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSS 345
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +2
Query: 14 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 112
T PP S TP + T P T T P+ S
Sbjct: 382 TTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSS 414
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +2
Query: 14 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 112
T PP S TP + T P T T P+ S
Sbjct: 428 TTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSS 460
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +2
Query: 14 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 112
T PP S TP + T P T T P+ S
Sbjct: 451 TTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSS 483
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +2
Query: 14 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 112
T PP S TP + T P T T P+ S
Sbjct: 543 TTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSS 575
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +2
Query: 14 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 112
T PP S TP + T P T T P+ S
Sbjct: 566 TTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSS 598
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +2
Query: 14 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 112
T PP S TP + T P T T P+ S
Sbjct: 589 TTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSS 621
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +2
Query: 14 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 112
T PP S TP + T P T T P+ S
Sbjct: 612 TTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSS 644
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +2
Query: 14 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 112
T PP S TP + T P T T P+ S
Sbjct: 635 TTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSS 667
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +2
Query: 14 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 112
T PP S TP + T P T T P+ S
Sbjct: 658 TTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSS 690
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +2
Query: 14 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 112
T PP S TP + T P T T P+ S
Sbjct: 750 TTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSS 782
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +2
Query: 14 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 112
T PP S TP + T P T T P+ S
Sbjct: 888 TTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSS 920
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +2
Query: 14 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 112
T PP S +P + T P T T +P+ S
Sbjct: 129 TTSTEPPSSSTSPVQTTTTTAPETTSTEAPSSS 161
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +2
Query: 14 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 112
T PP S TP + T P T T P+ S
Sbjct: 336 TTSTEPPSSSTTPVQTTTTTAPETTRTEPPSSS 368
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +2
Query: 14 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 112
T PP S TP + T P T T P+ S
Sbjct: 681 TTSTEPPSSSNTPVQTTTTTAPETTSTEPPSSS 713
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +2
Query: 14 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 112
T PP S TP + T P T T P+ S
Sbjct: 773 TTSTEPPSSSNTPVQTTTTTAPETTSTEPPSSS 805
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +2
Query: 14 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 112
T PP S TP + T P T T P+ S
Sbjct: 819 TTSTEPPSSSNTPVQTTTTTAPETTSTEPPSSS 851
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = +2
Query: 14 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 112
T PP S +P + T P T T P+ S
Sbjct: 175 TTSTEPPSSSTSPVQTTTTTAPETTSTEPPSSS 207
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +2
Query: 29 PPVSCWTPATVSPTPCPSTRDTHSPTPS 112
PP S TP + T P T T P+ S
Sbjct: 364 PPSSSTTPVQNTTTTAPETTSTEPPSSS 391
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = +2
Query: 14 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 112
T PP S +P + T P T T P+ S
Sbjct: 704 TTSTEPPSSSTSPVQTTTTTAPETTSTEPPSSS 736
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = +2
Query: 14 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 112
T PP S +P + T P T T P+ S
Sbjct: 842 TTSTEPPSSSTSPVQTTTTTAPETTSTEPPSSS 874
>AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical
protein Y51H7C.13 protein.
Length = 344
Score = 27.5 bits (58), Expect = 1.4
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 20 PVVPPVSCWTPATVSPTPCPSTRDTHSP 103
P +PP + T T + PCP T++P
Sbjct: 134 PCIPPTTTTTTTTTTRPPCPYPPATNTP 161
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 26.6 bits (56), Expect = 2.4
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +2
Query: 14 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT 124
T P + TP T + TP +T T +PT T
Sbjct: 83 TTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTT 119
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 26.2 bits (55), Expect = 3.2
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +2
Query: 23 VVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT 124
+VP S T T + TP P T T PT + T
Sbjct: 458 LVPTTSSSTTTTTTTTPVPVTSTTTEPTTTTYTT 491
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical protein
W01F3.3 protein.
Length = 2175
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = +2
Query: 5 SRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSP 103
S T P+ P + P T TP P + H P
Sbjct: 1537 SASTGPIAPEPTTAAPTTTETTPLPPSLAPHPP 1569
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 17 RPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 109
+PVVP VS TP PT ++ T P
Sbjct: 1515 QPVVPQVSIVTPQAPQPTAAATSASTGPIAP 1545
>AF164625-1|AAD47816.1| 944|Caenorhabditis elegans
tandem-array-modifier protein protein.
Length = 944
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 50 PATVSPTPCPSTRDTHSPTP 109
P+T S PS R HSPTP
Sbjct: 863 PSTSSGAAGPSNRPPHSPTP 882
>AF077537-8|AAC26277.1| 226|Caenorhabditis elegans Hypothetical
protein F16G10.9 protein.
Length = 226
Score = 25.8 bits (54), Expect = 4.2
Identities = 10/40 (25%), Positives = 19/40 (47%)
Frame = +2
Query: 5 SRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT 124
+ C +VPP + P+T++P + TP ++T
Sbjct: 34 TECCMRMVPPDDVYIPSTLAPVESTMAPGVSTMTPGGIYT 73
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 50 PATVSPTPCPSTRDTHSPTPSCVWT 124
PAT P + R T PTP WT
Sbjct: 230 PATFPPGSVSTVRYTPGPTPPAPWT 254
>AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array
expression modifierprotein 1 protein.
Length = 944
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 50 PATVSPTPCPSTRDTHSPTP 109
P+T S PS R HSPTP
Sbjct: 863 PSTSSGAAGPSNRPPHSPTP 882
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 25.4 bits (53), Expect = 5.6
Identities = 9/32 (28%), Positives = 14/32 (43%)
Frame = +2
Query: 2 CSRCTRPVVPPVSCWTPATVSPTPCPSTRDTH 97
C RC + + +P +P PCP D +
Sbjct: 1039 CERCKKGYYGDATKGSPYDCTPCPCPGASDCY 1070
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 25.4 bits (53), Expect = 5.6
Identities = 9/32 (28%), Positives = 14/32 (43%)
Frame = +2
Query: 2 CSRCTRPVVPPVSCWTPATVSPTPCPSTRDTH 97
C RC + + +P +P PCP D +
Sbjct: 1039 CERCKKGYYGDATKGSPYDCTPCPCPGASDCY 1070
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 25.4 bits (53), Expect = 5.6
Identities = 9/32 (28%), Positives = 14/32 (43%)
Frame = +2
Query: 2 CSRCTRPVVPPVSCWTPATVSPTPCPSTRDTH 97
C RC + + +P +P PCP D +
Sbjct: 1039 CERCKKGYYGDATKGSPYDCTPCPCPGASDCY 1070
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 25.4 bits (53), Expect = 5.6
Identities = 9/32 (28%), Positives = 14/32 (43%)
Frame = +2
Query: 2 CSRCTRPVVPPVSCWTPATVSPTPCPSTRDTH 97
C RC + + +P +P PCP D +
Sbjct: 1039 CERCKKGYYGDATKGSPYDCTPCPCPGASDCY 1070
>Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical protein
ZC101.2b protein.
Length = 1160
Score = 25.4 bits (53), Expect = 5.6
Identities = 9/32 (28%), Positives = 14/32 (43%)
Frame = +2
Query: 2 CSRCTRPVVPPVSCWTPATVSPTPCPSTRDTH 97
C RC + + +P +P PCP D +
Sbjct: 1039 CERCKKGYYGDATKGSPYDCTPCPCPGASDCY 1070
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 25.4 bits (53), Expect = 5.6
Identities = 9/32 (28%), Positives = 14/32 (43%)
Frame = +2
Query: 2 CSRCTRPVVPPVSCWTPATVSPTPCPSTRDTH 97
C RC + + +P +P PCP D +
Sbjct: 1039 CERCKKGYYGDATKGSPYDCTPCPCPGASDCY 1070
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 25.4 bits (53), Expect = 5.6
Identities = 9/32 (28%), Positives = 14/32 (43%)
Frame = +2
Query: 2 CSRCTRPVVPPVSCWTPATVSPTPCPSTRDTH 97
C RC + + +P +P PCP D +
Sbjct: 1039 CERCKKGYYGDATKGSPYDCTPCPCPGASDCY 1070
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 25.4 bits (53), Expect = 5.6
Identities = 9/32 (28%), Positives = 14/32 (43%)
Frame = +2
Query: 2 CSRCTRPVVPPVSCWTPATVSPTPCPSTRDTH 97
C RC + + +P +P PCP D +
Sbjct: 1039 CERCKKGYYGDATKGSPYDCTPCPCPGASDCY 1070
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 25.4 bits (53), Expect = 5.6
Identities = 9/32 (28%), Positives = 14/32 (43%)
Frame = +2
Query: 2 CSRCTRPVVPPVSCWTPATVSPTPCPSTRDTH 97
C RC + + +P +P PCP D +
Sbjct: 1039 CERCKKGYYGDATKGSPYDCTPCPCPGASDCY 1070
>Z82070-7|CAB04909.1| 321|Caenorhabditis elegans Hypothetical
protein W04E12.8 protein.
Length = 321
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Frame = +2
Query: 11 CTRPVVPPVSCWTPATVSPTPCPSTRDTHSPT--PSC 115
C PV+ +C T PT CP+ T PSC
Sbjct: 146 CVTPVIMTATCPPITTPIPTTCPTPAPCPVKTCVPSC 182
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 25.4 bits (53), Expect = 5.6
Identities = 9/32 (28%), Positives = 14/32 (43%)
Frame = +2
Query: 2 CSRCTRPVVPPVSCWTPATVSPTPCPSTRDTH 97
C RC + + +P +P PCP D +
Sbjct: 1038 CERCKKGYYGDATKGSPYDCTPCPCPGASDCY 1069
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +2
Query: 20 PVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 112
P +PPV P P P P+ S TPS
Sbjct: 237 PPLPPVGAGAPPPPPPPPPPAQLMASSGTPS 267
>AF016655-12|AAK31438.3| 1143|Caenorhabditis elegans Guanylyl
cyclase protein 19 protein.
Length = 1143
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 23 VVPPVSCWTPATVSPTPCP 79
V PPVSC TPA ++ + P
Sbjct: 309 VNPPVSCATPACINASTSP 327
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +2
Query: 20 PVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 112
P +PPV P P P P+ S TPS
Sbjct: 223 PPLPPVGAGAPPPPPPPPPPAQLMASSGTPS 253
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +2
Query: 20 PVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 112
P +PPV P P P P+ S TPS
Sbjct: 223 PPLPPVGAGAPPPPPPPPPPAQLMASSGTPS 253
>AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical
protein H06I04.5 protein.
Length = 1138
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +2
Query: 20 PVVPPVSCWTPATVSPTPCP--STRDTHSP 103
P+ PP S PA SP+P P ++ H+P
Sbjct: 587 PITPPKSQSPPALPSPSPSPHGASGAAHAP 616
>Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein.
Length = 292
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 47 TPATVSPTPCPSTRDTHSPTPS 112
TPA + TP S+ + +PTPS
Sbjct: 85 TPAPAAATPTASSAPSSNPTPS 106
>Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 47 TPATVSPTPCPSTRDTHSPTPS 112
TPA + TP S+ + +PTPS
Sbjct: 85 TPAPAAATPTASSAPSSNPTPS 106
>Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 47 TPATVSPTPCPSTRDTHSPTPS 112
TPA + TP S+ + +PTPS
Sbjct: 85 TPAPAAATPTASSAPSSNPTPS 106
>Z79598-1|CAB01867.3| 586|Caenorhabditis elegans Hypothetical
protein C44H4.1 protein.
Length = 586
Score = 25.0 bits (52), Expect = 7.4
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2
Query: 29 PPVSCWTPATVS 64
PP CWTP+ +S
Sbjct: 439 PPAKCWTPSNLS 450
>Z74035-3|CAA98481.1| 808|Caenorhabditis elegans Hypothetical
protein F47G9.4 protein.
Length = 808
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 11 CTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 109
C S +P+ S +P PST +H+P P
Sbjct: 23 CQHTTCRKCSTGSPSCKSCSPIPSTSRSHTPHP 55
>Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 47 TPATVSPTPCPSTRDTHSPTPS 112
TPA + TP S+ + +PTPS
Sbjct: 85 TPAPAAATPTASSAPSSNPTPS 106
>Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 47 TPATVSPTPCPSTRDTHSPTPS 112
TPA + TP S+ + +PTPS
Sbjct: 85 TPAPAAATPTASSAPSSNPTPS 106
>Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical
protein F13D12.3 protein.
Length = 245
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 14 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 112
T+P+VPP V P P+ PTPS
Sbjct: 139 TQPIVPPPVPEVSEPVPEPPIPAPGPVAPPTPS 171
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2
Query: 62 TPSPESSTIPVVRPDAYSE 6
TP P SST+PVV P ++
Sbjct: 865 TPQPLSSTMPVVAPSTSTQ 883
>AF040654-7|AAK21450.2| 362|Caenorhabditis elegans Hypothetical
protein R06B10.3 protein.
Length = 362
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 11 CTRPVVPPVSCWTPATVSPTPCPSTRDT 94
CT+P P C+ PA +PT P+T T
Sbjct: 139 CTKPY--PFFCYGPALGAPTNPPNTPKT 164
>AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical
protein T07A9.14 protein.
Length = 204
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 50 PATVSPTPCPSTRDTHSPTPS 112
P + +PTP P + SPTP+
Sbjct: 171 PPSSTPTPTPPPSSSSSPTPT 191
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +2
Query: 53 ATVSPTPCPSTRDTHSPTP 109
+T +PTP PS+ + +PTP
Sbjct: 174 STPTPTPPPSSSSSPTPTP 192
>Z96047-4|CAB09414.1| 796|Caenorhabditis elegans Hypothetical
protein DY3.5 protein.
Length = 796
Score = 24.6 bits (51), Expect = 9.8
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
Frame = +2
Query: 14 TRP--VVPPVSCWTPATV---SPTPCPSTRDTHSPTP 109
TRP V+ P S P + SPT P TR T PTP
Sbjct: 624 TRPASVIAPSSSVVPKSQPRPSPTTRPPTRATIRPTP 660
>Z82070-6|CAB04910.1| 321|Caenorhabditis elegans Hypothetical
protein W04E12.6 protein.
Length = 321
Score = 24.6 bits (51), Expect = 9.8
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +2
Query: 11 CTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 118
C PV+ +C T PT CP+ P CV
Sbjct: 146 CVTPVIMTATCPPITTPIPTTCPT--PAPCPIKQCV 179
>Z81560-8|CAN86623.1| 173|Caenorhabditis elegans Hypothetical
protein K02E2.8b protein.
Length = 173
Score = 24.6 bits (51), Expect = 9.8
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 32 PVSCWTPATVSPTPCPSTRDTHSPTPSCVWT 124
PVS T T + T P+T T P P + T
Sbjct: 33 PVSTTTTTTTTTTEAPTTTTTVVPIPCNICT 63
>Z81560-7|CAB76737.2| 188|Caenorhabditis elegans Hypothetical
protein K02E2.8a protein.
Length = 188
Score = 24.6 bits (51), Expect = 9.8
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 32 PVSCWTPATVSPTPCPSTRDTHSPTPSCVWT 124
PVS T T + T P+T T P P + T
Sbjct: 48 PVSTTTTTTTTTTEAPTTTTTVVPIPCNICT 78
>Z81470-1|CAB03881.1| 321|Caenorhabditis elegans Hypothetical
protein C14A6.1 protein.
Length = 321
Score = 24.6 bits (51), Expect = 9.8
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +2
Query: 11 CTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 118
C PV+ +C T PT CP+ P CV
Sbjct: 146 CVTPVIMTATCPPITTPIPTTCPT--PAPCPIKQCV 179
>Z75533-3|CAA99822.1| 868|Caenorhabditis elegans Hypothetical
protein C54G4.4 protein.
Length = 868
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 17 RPVVPPVSCWTPATVSPTPCPS 82
RP +PP + P+ P+P PS
Sbjct: 784 RPSLPPSMLFNPSIPPPSPTPS 805
>Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical
protein C35A5.4 protein.
Length = 427
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/35 (28%), Positives = 15/35 (42%)
Frame = +2
Query: 8 RCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 112
R P TP+ +P+P T +PTP+
Sbjct: 300 RTPTPTTKKTQSVTPSNSTPSPAKPATPTKTPTPT 334
>U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore
complex protein protein11 protein.
Length = 805
Score = 24.6 bits (51), Expect = 9.8
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +2
Query: 14 TRPVVPPVSCWTPATVSPTP-CPSTRDTHSPTP 109
T P TP+TVS TP P+T T S P
Sbjct: 505 TTPATAATLGQTPSTVSATPSLPTTTSTTSTLP 537
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 24.6 bits (51), Expect = 9.8
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2
Query: 98 SAYPS*MGTVWETPSPESSTIPVV 27
S PS G+ TP+P ST PVV
Sbjct: 1264 SPNPSTSGSSTPTPNPSQSTSPVV 1287
>U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical
protein F25E2.2 protein.
Length = 624
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +2
Query: 20 PVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 112
P P + T T +P P +T T +P P+
Sbjct: 414 PTTPLPTTTTTTTTTPKPTTTTTTTTTPAPT 444
>AF047662-4|AAC04444.1| 145|Caenorhabditis elegans Hypothetical
protein T22B2.6 protein.
Length = 145
Score = 24.6 bits (51), Expect = 9.8
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 7/48 (14%)
Frame = +2
Query: 2 CSRCTRPVVPP----VSCWTPATVSPTP-CPSTRDTHSPT--PSCVWT 124
CS C+ PVV P VS + P ++ P PS PT P+CV T
Sbjct: 20 CSSCSAPVVAPAPVAVSGYQPYGIAYYPVVPSCTAQCMPTCAPTCVDT 67
>AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical
protein Y51H7C.1 protein.
Length = 448
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 50 PATVSPTPCPSTRDTHSPTPSCVWT 124
PAT P + R T PTP WT
Sbjct: 153 PATFPPGSISTVRYTPGPTPPGPWT 177
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,592,802
Number of Sequences: 27780
Number of extensions: 58696
Number of successful extensions: 613
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of database: 12,740,198
effective HSP length: 23
effective length of database: 12,101,258
effective search space used: 229923902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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