Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt21c23
(677 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_1105 + 9102059-9102167,9103770-9103907,9104125-9104267,910... 146 1e-35
02_05_0620 - 30412004-30412429,30412509-30412646,30412729-304128... 137 7e-33
01_05_0545 + 23109920-23110040,23113363-23113505,23113626-231140... 133 1e-31
06_03_0627 + 22903346-22903523,22906010-22906152,22906235-229066... 128 4e-30
01_05_0544 + 23098921-23098953,23099209-23099272,23099942-231000... 108 3e-24
04_04_0154 - 23146445-23146535,23146689-23146795,23146933-231469... 78 6e-15
02_01_0550 + 4044683-4044784,4044862-4044975,4045277-4045360,404... 69 5e-13
08_02_0717 + 20372728-20372836,20372936-20373078,20374131-203742... 54 1e-07
07_01_0637 + 4767021-4767083,4767175-4767249,4767339-4767500,476... 53 2e-07
09_04_0272 - 16278136-16278289,16278873-16278970,16279090-162792... 46 4e-05
08_02_0811 + 21438848-21439001,21439469-21439662,21439769-214398... 33 0.21
07_03_1752 - 29218348-29218524,29218593-29218736,29218957-292191... 33 0.21
01_01_0489 + 3608720-3608811,3609326-3609431,3609518-3609581,360... 31 0.64
02_03_0343 + 17961977-17962596,17962670-17963015,17965933-179662... 31 0.85
05_05_0263 - 23673014-23673697,23673772-23674188 29 3.4
02_03_0344 + 17967687-17968309,17968402-17968744,17970285-179704... 28 6.0
>06_01_1105 +
9102059-9102167,9103770-9103907,9104125-9104267,
9104362-9104515,9104610-9104839,9105382-9105471,
9105606-9105779,9105873-9106010,9106212-9106349,
9106450-9106511,9106744-9106972,9108531-9109364
Length = 812
Score = 146 bits (355), Expect = 1e-35
Identities = 72/159 (45%), Positives = 96/159 (60%)
Frame = +3
Query: 198 EILYTGLFINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSP 377
++ YT L I+ ++V S+ GKTF T +P G++IA V F G P
Sbjct: 65 QVNYTQLLIDGKFVDSASGKTFPTLDPRTGELIAHVAEGDAEDINRAVHAARKAFDEG-P 123
Query: 378 WRTMDASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGW 557
W M A ER ++ + ADLIE+ +A+LET DNGKPY + ++ + +RYYAGW
Sbjct: 124 WPKMTAYERSRILLRFADLIEKHNDEIAALETWDNGKPYAQAANIEVPMVARLMRYYAGW 183
Query: 558 ADKIHGNVLPADGKYFAYTRHEPVGVCGQIIPWNFPILM 674
ADKIHG V+PADG + HEP+GV GQIIPWNFP+LM
Sbjct: 184 ADKIHGLVVPADGPHHVQVLHEPIGVAGQIIPWNFPLLM 222
>02_05_0620 -
30412004-30412429,30412509-30412646,30412729-30412866,
30412966-30413139,30413211-30413684,30413775-30413917,
30414002-30414160,30414943-30415042
Length = 583
Score = 137 bits (332), Expect = 7e-33
Identities = 69/159 (43%), Positives = 91/159 (57%)
Frame = +3
Query: 198 EILYTGLFINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSP 377
++ YT L IN +V ++ GKTF T +P G VIA V F G P
Sbjct: 69 DVKYTKLLINGNFVDAASGKTFATVDPRTGDVIARVAEGDAEDVNRAVAAARRAFDEG-P 127
Query: 378 WRTMDASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGW 557
W M A ER ++ + ADLIE+ +A+LET D GK + + ++ + +RYY GW
Sbjct: 128 WPRMTAYERCRVLLRFADLIEQHADEIAALETWDGGKTLEQTTGTEVPMVARYMRYYGGW 187
Query: 558 ADKIHGNVLPADGKYFAYTRHEPVGVCGQIIPWNFPILM 674
ADKIHG V+PADG + HEP+GV GQIIPWNFP+LM
Sbjct: 188 ADKIHGLVVPADGPHHVQVLHEPIGVAGQIIPWNFPLLM 226
>01_05_0545 +
23109920-23110040,23113363-23113505,23113626-23114009,
23114106-23114219,23114310-23114483,23114608-23114745,
23114884-23115021,23115094-23115155,23115268-23115541
Length = 515
Score = 133 bits (322), Expect = 1e-31
Identities = 70/159 (44%), Positives = 90/159 (56%)
Frame = +3
Query: 198 EILYTGLFINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSP 377
EI +T LFIN E+V ++ GKTFKT +P G V+A + F+ G
Sbjct: 23 EIKFTKLFINGEFVDAASGKTFKTRDPRTGDVLAHIAEADKADVDLAVKAAREAFEHGK- 81
Query: 378 WRTMDASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGW 557
W M ER ++NKLADL+E+ LA+L+ D GK D+ A+ + +RYYAG
Sbjct: 82 WPRMSGYERSRVMNKLADLVEQHADELAALDGADAGKLLTLGKIIDMPAAAQMMRYYAGA 141
Query: 558 ADKIHGNVLPADGKYFAYTRHEPVGVCGQIIPWNFPILM 674
ADKIHG L GKY YT EP+GV G IIPWNFP +M
Sbjct: 142 ADKIHGESLRVAGKYQGYTLREPIGVVGVIIPWNFPTMM 180
>06_03_0627 +
22903346-22903523,22906010-22906152,22906235-22906618,
22906980-22907069,22907147-22907320,22907414-22907551,
22907719-22907856,22907958-22908019,22908240-22908513
Length = 526
Score = 128 bits (309), Expect = 4e-30
Identities = 68/159 (42%), Positives = 88/159 (55%)
Frame = +3
Query: 198 EILYTGLFINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSP 377
EI YT LFIN +V ++ GKTF+T +P G VIA V F G
Sbjct: 42 EIRYTKLFINGRFVDAASGKTFETRDPRTGDVIARVAEGDKEDVDLAVKAAREAFDHGE- 100
Query: 378 WRTMDASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGW 557
W M SERG ++ K A+++ER LA+LE+LD GKP + D+ + LRY+AG
Sbjct: 101 WPRMSGSERGRVMAKYAEVVERHADELAALESLDAGKPLAAARAVDVGECVGILRYFAGA 160
Query: 558 ADKIHGNVLPADGKYFAYTRHEPVGVCGQIIPWNFPILM 674
ADKIHG L + YT EP+GV G I+PWNFP +M
Sbjct: 161 ADKIHGETLKMSRQLQGYTLREPLGVAGLIVPWNFPAIM 199
>01_05_0544 +
23098921-23098953,23099209-23099272,23099942-23100084,
23100246-23100719,23100950-23101123,23101230-23101367,
23101489-23101589,23101910-23102183
Length = 466
Score = 108 bits (260), Expect = 3e-24
Identities = 56/141 (39%), Positives = 74/141 (52%)
Frame = +3
Query: 252 GKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDASERGALINKLAD 431
GKTF+T +P G+VIA++ F G PW M RG +++K AD
Sbjct: 33 GKTFETRDPRTGEVIAKIAEGDKADIDLAVKAAREAFDHG-PWPRMSGFARGRILHKFAD 91
Query: 432 LIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADKIHGNVLPADGKYFAY 611
L+E+ LA+L+T+D GK + D+ LRYYAG ADK+HG L Y
Sbjct: 92 LVEQHVEELAALDTVDAGKLFAMGKLVDIPGGANLLRYYAGAADKVHGETLKMARPCHGY 151
Query: 612 TRHEPVGVCGQIIPWNFPILM 674
T EPVGV G I+PWN+P M
Sbjct: 152 TLKEPVGVVGHIVPWNYPTTM 172
>04_04_0154 -
23146445-23146535,23146689-23146795,23146933-23146993,
23147070-23147221,23147306-23147383,23147696-23147809,
23147880-23147956,23148128-23148194,23148341-23148406,
23148528-23148651,23148733-23148825,23149446-23149594,
23149681-23149761,23150502-23150644,23150758-23150872
Length = 505
Score = 78.2 bits (184), Expect = 6e-15
Identities = 52/162 (32%), Positives = 72/162 (44%), Gaps = 7/162 (4%)
Frame = +3
Query: 213 GLFINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKL--GSPWRT 386
GLFI W + S G+ NPA I ++ F G W
Sbjct: 11 GLFIGGGWREPSLGRRLPVVNPATEATIGDIPAATAEDVELAVSAARDAFGRDGGRHWSR 70
Query: 387 MDASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADK 566
+ R + +A I+ ++YLA LETLD+GKP D GD+ YYA A+
Sbjct: 71 APGAVRAKYLKAIAAKIKDKKSYLALLETLDSGKPL-DEAAGDMEDVAACFEYYADLAEA 129
Query: 567 IHGNV-----LPADGKYFAYTRHEPVGVCGQIIPWNFPILMA 677
+ G LP + + +Y EP+GV G I PWN+P+LMA
Sbjct: 130 LDGKQRAPISLPMEN-FESYVLKEPIGVVGLITPWNYPLLMA 170
>02_01_0550 +
4044683-4044784,4044862-4044975,4045277-4045360,
4045818-4045917,4046923-4046971,4047071-4047158,
4047251-4047361,4047771-4047833,4047942-4048052,
4048517-4048582,4048689-4048766,4049553-4049630,
4049784-4049850,4049930-4050015,4050301-4050333,
4050426-4050458,4050754-4050854,4050986-4051071,
4051478-4051584,4051683-4051839,4051854-4051984
Length = 614
Score = 68.5 bits (160), Expect(2) = 5e-13
Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
Frame = +3
Query: 261 FKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDASERGALINKLADLIE 440
+ +NPA G+ +A V F W + A+ER + K DLI
Sbjct: 99 YLVQNPATGETLANVSCMGSKETSDAIASAHSTFY---SWSKLTANERSKALRKWHDLII 155
Query: 441 RDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADKIHGNVLPAD-GKYFAYTR 617
+ LA L TL+ GKP K++ Y + + Y+A A +I+G+++P
Sbjct: 156 SHKEELALLMTLEQGKPMKEALVEVTYGA-SFIEYFAEEAKRIYGDIIPPTLSDRRLLVL 214
Query: 618 HEPVGVCGQIIPWNFPILM 674
+PVGV G + PWNFP+ M
Sbjct: 215 KQPVGVVGAVTPWNFPLAM 233
Score = 23.4 bits (48), Expect(2) = 5e-13
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 201 ILYTGLFINNEWVKSSDGKTFKTEN 275
+L T I +WV + DGKT + N
Sbjct: 51 LLRTQGLIGGKWVDAYDGKTIEVVN 75
>08_02_0717 +
20372728-20372836,20372936-20373078,20374131-20374211,
20374307-20374510,20374789-20374796,20375153-20375245,
20375377-20375500,20375585-20375650,20375841-20375907,
20376600-20376676,20377032-20377145,20377546-20377623,
20377705-20377856,20377960-20378020,20378292-20378398,
20378497-20378562,20379099-20379177,20379671-20379967
Length = 641
Score = 54.0 bits (124), Expect = 1e-07
Identities = 43/156 (27%), Positives = 62/156 (39%), Gaps = 7/156 (4%)
Frame = +3
Query: 216 LFINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKL--GSPWRTM 389
LF+ EW + G+ NPA I E+ K G W
Sbjct: 10 LFVAGEWRAPALGRRLPVVNPATESPIGEIPAGTAEDVDAAVAAAREALKRNRGRDWARA 69
Query: 390 DASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADKI 569
+ R + +A I ++ LA LETLD GKP ++ + D+ Y+A A+ +
Sbjct: 70 PGAVRAKYLRAIAAKIIERKSELARLETLDCGKPLDEAAW-DMDDVAGCFEYFADLAESL 128
Query: 570 HGN-----VLPADGKYFAYTRHEPVGVCGQIIPWNF 662
LP + + Y R EP+GV G I PW F
Sbjct: 129 DKRQNAPVSLPME-NFKCYLRKEPIGVVGLITPWYF 163
>07_01_0637 +
4767021-4767083,4767175-4767249,4767339-4767500,
4767624-4767702,4767922-4768076,4768225-4768288,
4768928-4769007,4769366-4769431,4769932-4769982,
4770087-4770238,4770270-4770287,4770323-4770413,
4771156-4771236,4771330-4771407,4772315-4772350,
4772425-4772468,4772567-4772645,4773035-4773125,
4773268-4773374
Length = 523
Score = 52.8 bits (121), Expect = 2e-07
Identities = 38/154 (24%), Positives = 65/154 (42%), Gaps = 1/154 (0%)
Frame = +3
Query: 216 LFINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDA 395
L I E+V+S + NPA +V++ + F WR
Sbjct: 26 LLIGGEFVESRADEHVDVTNPATQEVVSRIPLTTADEFRAAVDAARTAFP---GWRNTPV 82
Query: 396 SERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADKIHG 575
+ R ++ K +LI + LA T + GK KD++ GD++ ++ + + G G
Sbjct: 83 TTRQRIMLKYQELIRANMDKLAENITTEQGKTLKDAW-GDVFRGLEVVEHACGMGTLQMG 141
Query: 576 N-VLPADGKYFAYTRHEPVGVCGQIIPWNFPILM 674
V ++ EP+GVC I P+NFP ++
Sbjct: 142 EYVSNVSNGIDTFSIREPLGVCAGICPFNFPAMI 175
>09_04_0272 -
16278136-16278289,16278873-16278970,16279090-16279230,
16279701-16279865,16279941-16280117,16280330-16280510,
16280784-16280829,16281178-16281241,16281331-16281353,
16281964-16282036,16282410-16282541,16283343-16283429,
16283488-16283700
Length = 517
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Frame = +3
Query: 378 WRTMDASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGW 557
W + A +RG ++ ++ D + +L L +L+ GK + G++ I Y G
Sbjct: 98 WMAIPAPKRGEIVRQIGDALRAKLHHLGRLVSLEMGKILPEG-IGEVQEIIDMCDYAVGL 156
Query: 558 ADKIHGNVLPADG-KYFAYTRHEPVGVCGQIIPWNFP 665
+ +++G+++P++ + P+GV G I +NFP
Sbjct: 157 SRQLNGSIIPSERPNHMMMEVWNPLGVVGVITAFNFP 193
>08_02_0811 +
21438848-21439001,21439469-21439662,21439769-21439897,
21441552-21441671,21441751-21441887,21441969-21442124,
21442565-21442943,21443041-21443157,21443225-21443371
Length = 510
Score = 33.1 bits (72), Expect = 0.21
Identities = 36/161 (22%), Positives = 63/161 (39%), Gaps = 8/161 (4%)
Frame = +3
Query: 219 FINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDAS 398
+ + EW S+ GK+ NP VQ K W
Sbjct: 22 YADGEWRVSASGKSVAIVNPTTRLTQYRVQACTQEEVNKVMETAKVAQKA---WARTPLW 78
Query: 399 ERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADKI--H 572
+R L++K A +++ +T +A + KP KD+ ++ S + Y A +I
Sbjct: 79 KRAELLHKAAAILKEHKTPIAECLVKEIAKPAKDA-ISEVVRSGDLVSYTAEEGVRILGE 137
Query: 573 GNVLPADG------KYFAYTRHEPVGVCGQIIPWNFPILMA 677
G +L +D + + P+GV I P+N+P+ +A
Sbjct: 138 GKLLVSDSFPGNERNKYCLSSKVPLGVVLAIPPFNYPVNLA 178
>07_03_1752 -
29218348-29218524,29218593-29218736,29218957-29219148,
29219225-29219440,29219873-29220010,29220137-29220232,
29221204-29221357,29221976-29222098,29222291-29222418,
29222669-29222773,29223396-29223437,29223631-29223746,
29223805-29223916
Length = 580
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/100 (19%), Positives = 41/100 (41%), Gaps = 4/100 (4%)
Frame = +3
Query: 378 WRTMDASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGW 557
W +R + L I + + + + D GK D+ G++ + + + +
Sbjct: 140 WAKSSFKQRRQFLRILLKYILEHQDLICEISSRDTGKTMVDASLGEIMTTCEKITWLLDE 199
Query: 558 ADKIHGNVLPADGKYFAYTRHE----PVGVCGQIIPWNFP 665
+K + G+ + + + P+GV G I+ WN+P
Sbjct: 200 GEKWLKPEYRSCGRSMLHKKAKVEFYPLGVIGAIVSWNYP 239
>01_01_0489 +
3608720-3608811,3609326-3609431,3609518-3609581,
3609905-3609965,3610017-3610144,3610236-3610385,
3610537-3610791,3611060-3611265,3611469-3611696,
3612161-3612259
Length = 462
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 420 KLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKN 536
K+ L R YLASL + D+ P KD F ++YA+ N
Sbjct: 287 KIYRLRNPSRKYLASLSSYDSSNPTKDWGFPNIYANSDN 325
>02_03_0343 +
17961977-17962596,17962670-17963015,17965933-17966291,
17966384-17966636
Length = 525
Score = 31.1 bits (67), Expect = 0.85
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +2
Query: 542 VLRRVGRQDPRECPARRRKILCLHSS*ASGCVRSDNTME 658
VL V RQDP ECP + LC+ SS +G S +T+E
Sbjct: 300 VLLSVQRQDPEECPDQLISSLCI-SSLEAGTGTSTDTIE 337
>05_05_0263 - 23673014-23673697,23673772-23674188
Length = 366
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 366 LGSPWRTMDASERGALINKLADLIERDR 449
+ SPWR +DA G ++ +L L++R R
Sbjct: 1 MDSPWRDLDADVLGFILKRLPCLVDRRR 28
>02_03_0344 +
17967687-17968309,17968402-17968744,17970285-17970410,
17970458-17970642,17970721-17970973
Length = 509
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +2
Query: 542 VLRRVGRQDPRECPARRRKILCLHSS*ASGCVRSDNTME 658
VL V RQDP CP + + LC+ SS +G S +T+E
Sbjct: 300 VLLSVQRQDPDACPDQLIRSLCI-SSLEAGTDTSADTIE 337
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,542,359
Number of Sequences: 37544
Number of extensions: 390598
Number of successful extensions: 1080
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1069
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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