Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt21b19
         (685 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   2.7  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   8.3  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               21   8.3  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   8.3  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   8.3  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 12/48 (25%), Positives = 20/48 (41%)
 Frame = -3

Query: 494 SERTEEDADPQPRHQEPRGQKRYLFEHCS*NAVY*SCQTHTAIRNASN 351
           S  + E++  +        +KR   EHC     Y +   HT I N+ +
Sbjct: 756 SSTSSEESREEKATTSLEAEKREKSEHCEKGKEYYAASFHTDIGNSQS 803


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -1

Query: 367 YVMLVITIIVCILFV 323
           Y++L IT+I  ++FV
Sbjct: 51  YIVLPITVIYAVIFV 65


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +2

Query: 551 SYTIRIYLILTG*FLY*NDLVFKRFCKKNCK 643
           +Y     L++T  FLY  +   K+ C+K  K
Sbjct: 4   NYHFFFILVITLIFLYFGEADIKKDCRKESK 34


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 15/71 (21%), Positives = 28/71 (39%)
 Frame = +3

Query: 162 KVKTVSAQTHRRLLQV*RMWDYRNNQIKTRNTCG*CGVRNCTLIEALVNGEAAATNKIQT 341
           K+  +  Q  + + +   M D    Q  +  T        C L    +  ++A T  +QT
Sbjct: 759 KIYIILFQPDKNIRRKVTMGDKSKKQGSSAGTSSITKYTGCELTSESMPLQSALTAAVQT 818

Query: 342 IIVITSITYCS 374
            + +T I+  S
Sbjct: 819 SVGVTEISLAS 829


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
            receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 15/71 (21%), Positives = 28/71 (39%)
 Frame = +3

Query: 162  KVKTVSAQTHRRLLQV*RMWDYRNNQIKTRNTCG*CGVRNCTLIEALVNGEAAATNKIQT 341
            K+  +  Q  + + +   M D    Q  +  T        C L    +  ++A T  +QT
Sbjct: 849  KIYIILFQPDKNIRRKVTMGDKSKKQGSSAGTSSITKYTGCELTSESMPLQSALTAAVQT 908

Query: 342  IIVITSITYCS 374
             + +T I+  S
Sbjct: 909  SVGVTEISLAS 919


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,466
Number of Sequences: 438
Number of extensions: 3590
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)