Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt21b17
         (705 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70680-7|CAA94572.2|  227|Caenorhabditis elegans Hypothetical pr...    42   6e-04
AL033514-24|CAA22108.1| 2121|Caenorhabditis elegans Hypothetical...    30   1.9  
U58762-3|AAM15611.1|  331|Caenorhabditis elegans Hypothetical pr...    28   5.7  
U58762-2|AAK39302.1|  722|Caenorhabditis elegans Hypothetical pr...    28   5.7  
U58762-1|AAK39301.1|  732|Caenorhabditis elegans Hypothetical pr...    28   5.7  

>Z70680-7|CAA94572.2|  227|Caenorhabditis elegans Hypothetical
           protein C25G4.3 protein.
          Length = 227

 Score = 41.5 bits (93), Expect = 6e-04
 Identities = 29/116 (25%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
 Frame = +1

Query: 268 RRVAMLNKMFMKHITDLMSTGTVSMDIIGR-GIEISKVNVTSDFQTVHVYWICKGTSTDE 444
           ++V  L+++  + I ++++T     +++GR  ++I++V V   F  V VYW+C+G   D 
Sbjct: 84  KKVVQLSRILEERIAEVVATD----EMLGRLQLQITRVRVDRAFTQVSVYWMCRGDG-DS 138

Query: 445 ETEATLNSVAGALRHELSVLRIMGQVPYIVFVKDMHEARILDLDNRLLKADFGENY 612
           E    L      +R  +    I    P + F+ D       ++D    +AD+G +Y
Sbjct: 139 EIVDFLEESKHQIRRRVEE-SIGITCPEVKFIGDKALLMEQEMDKLFREADYGMDY 193


>AL033514-24|CAA22108.1| 2121|Caenorhabditis elegans Hypothetical
            protein Y75B8A.24 protein.
          Length = 2121

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = +1

Query: 526  YIVFVKDMHEARIL-DLDNRLLKADFGENYTPTDPGHLLKTEFTLDTKISPDIKA 687
            +++ +KD H   I+ DLD  ++  DFG  +  +  G+L    F  D K+S ++ A
Sbjct: 1970 FLLQIKDRHNGNIMIDLDGHIIHIDFGFMFESSPGGNL---GFEPDFKLSEEMVA 2021


>U58762-3|AAM15611.1|  331|Caenorhabditis elegans Hypothetical
           protein T27F7.2c protein.
          Length = 331

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 15/38 (39%), Positives = 25/38 (65%)
 Frame = +3

Query: 27  TKRI*TLRQVIIFNSNVKLFTSLPCIVCYVQYQKTKFK 140
           TK+     Q+++ + +V L + LPC + +VQ+QKT FK
Sbjct: 238 TKKPFPTLQMMLTHHSV-LESHLPCTLHFVQWQKTNFK 274


>U58762-2|AAK39302.1|  722|Caenorhabditis elegans Hypothetical
           protein T27F7.2b protein.
          Length = 722

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 15/38 (39%), Positives = 25/38 (65%)
 Frame = +3

Query: 27  TKRI*TLRQVIIFNSNVKLFTSLPCIVCYVQYQKTKFK 140
           TK+     Q+++ + +V L + LPC + +VQ+QKT FK
Sbjct: 607 TKKPFPTLQMMLTHHSV-LESHLPCTLHFVQWQKTNFK 643


>U58762-1|AAK39301.1|  732|Caenorhabditis elegans Hypothetical
           protein T27F7.2a protein.
          Length = 732

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 15/38 (39%), Positives = 25/38 (65%)
 Frame = +3

Query: 27  TKRI*TLRQVIIFNSNVKLFTSLPCIVCYVQYQKTKFK 140
           TK+     Q+++ + +V L + LPC + +VQ+QKT FK
Sbjct: 617 TKKPFPTLQMMLTHHSV-LESHLPCTLHFVQWQKTNFK 653


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,879,030
Number of Sequences: 27780
Number of extensions: 381123
Number of successful extensions: 859
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)