Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt21b08
(463 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 29 0.26
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 29 0.35
SPBC1685.01 |pmp1||dual-specificity MAP kinase phosphatase Pmp1|... 29 0.35
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 28 0.80
SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyce... 27 1.4
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo... 27 1.8
SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2 |Schizosacch... 26 3.2
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 26 3.2
SPCC777.03c |||nifs homolog|Schizosaccharomyces pombe|chr 3|||Ma... 25 4.3
SPAPJ698.03c |prp12|sap130|U2 snRNP-associated protein Sap130 |S... 25 5.6
SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase Pl... 25 5.6
SPAC2G11.07c |ptc3||protein phosphatase 2C Ptc3|Schizosaccharomy... 25 5.6
SPBC1683.13c |||transcription factor |Schizosaccharomyces pombe|... 25 5.6
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 25 7.4
SPBC530.14c |dsk1||SR protein-specific kinase Dsk1|Schizosacchar... 25 7.4
SPCC777.04 |||amino acid transporter |Schizosaccharomyces pombe|... 25 7.4
SPAC11D3.10 |||nifs homolog|Schizosaccharomyces pombe|chr 1|||Ma... 25 7.4
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo... 24 9.8
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 24 9.8
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 24 9.8
>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1367
Score = 29.5 bits (63), Expect = 0.26
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 364 NFLRYSLLPTASTRERGRLEVRSALGRVHVICTVVDRFV 248
NF ++P STR+R + +R G +H+IC D +
Sbjct: 756 NFRVLDIIPFTSTRKRMSVIIRDEDGIIHLICKGADTVI 794
>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 557
Score = 29.1 bits (62), Expect = 0.35
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Frame = +2
Query: 158 HPGHGNGYEPIDNRPYIVNPPKD-YNPNG-NGYEPIDNGAYYVDPPQG---RPYFKPTPF 322
H G+ Y +++ Y P +D YN N N Y PI N Y+++ G PYF
Sbjct: 97 HYGNNRTYYK-NSQGYRRKPKRDDYNNNRKNFYPPIQNSTYFINATGGIDSMPYFGLNNA 155
Query: 323 PG 328
PG
Sbjct: 156 PG 157
>SPBC1685.01 |pmp1||dual-specificity MAP kinase phosphatase
Pmp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 278
Score = 29.1 bits (62), Expect = 0.35
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +2
Query: 134 HVNVVDNNHPG-HGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFK 310
H N+++N H + P P PK PN N +P NG + PP Y K
Sbjct: 20 HKNMLENEEEASHSQLFTPCPVPPSF---PKASKPNSN--QPYPNGPVCIYPPNIYLYAK 74
Query: 311 PT 316
PT
Sbjct: 75 PT 76
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 27.9 bits (59), Expect = 0.80
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +3
Query: 177 ATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTSSLPLSL 326
A+ L +++ T+ + P +T ET ++ S+ T T+ + TSS P+SL
Sbjct: 234 ASTLESSSLTNTVSPTESTFYETKSSTSSVP--TQTIDSSSFTSSTPVSL 281
>SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 964
Score = 27.1 bits (57), Expect = 1.4
Identities = 20/71 (28%), Positives = 26/71 (36%)
Frame = +2
Query: 128 PGHVNVVDNNHPGHGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYF 307
P + + NHP + + P P I PP +Y PN P + DP
Sbjct: 270 PASADRLQKNHPVQSSNFNPYTPAPSITVPP-NYIPNTAMMGPSYSSFGDTDPRTYPAGM 328
Query: 308 KPTPFPGARGG 340
P P AR G
Sbjct: 329 GPNP-TAARNG 338
>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
Wis4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1401
Score = 26.6 bits (56), Expect = 1.8
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +1
Query: 250 RTYRQRCILRGPSPRPTLLQAYPFPWCSRWEVKNIL 357
R + ++C R P RP + PW + + K I+
Sbjct: 1280 RDFIEQCFERDPEQRPRAVDLLTHPWITDFRKKTII 1315
>SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2176
Score = 25.8 bits (54), Expect = 3.2
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = -1
Query: 151 VDHVNVSRIIIIDDVHL 101
+ +VN+ R++IID+VHL
Sbjct: 642 LSYVNLVRLVIIDEVHL 658
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 25.8 bits (54), Expect = 3.2
Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Frame = +3
Query: 168 TETATNLLTTAR-TSLILPKITTLMETATNL--STTVHITWTLP 290
TET+T+ +T+ TS++ P T+ T T + +T+++ T T+P
Sbjct: 54 TETSTHSVTSTNITSIVPPPSTSHNSTTTTVPPTTSMNTTTTVP 97
>SPCC777.03c |||nifs homolog|Schizosaccharomyces pombe|chr
3|||Manual
Length = 396
Score = 25.4 bits (53), Expect = 4.3
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +2
Query: 128 PG-HVNVVDNNHPGHGNGYEPIDNRPYIVN--PPKD-YNPNGNGYEP 256
PG +V ++D HP HG G+ + V P KD Y + + +EP
Sbjct: 106 PGDNVVLLDGEHPNHGFGWISLQEAGLEVRLIPSKDIYYADASTFEP 152
>SPAPJ698.03c |prp12|sap130|U2 snRNP-associated protein Sap130
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1206
Score = 25.0 bits (52), Expect = 5.6
Identities = 20/96 (20%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Frame = -1
Query: 322 ERGRLEVRSALGRVHVICTVVDRFVAVSIRVVIFGRINDVRAVVNRFVAVSVT-RMVIVD 146
+R L V S GR+ ++ V++ V I FG+ R V ++A+ R ++
Sbjct: 80 KRDYLVVTSDSGRITILEYNVEKNKLVPIYQETFGKSGIRRVVPGEYLAIDAKGRAAMIA 139
Query: 145 HVNVSRIIII----DDVHLSVGHSQQSEDENHEEFH 50
V ++++ + + +L++ ++ N+ FH
Sbjct: 140 SVEKNKLVYVLNRDSEANLTISSPLEAHKANNICFH 175
>SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase
Plh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 623
Score = 25.0 bits (52), Expect = 5.6
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 221 KDYNPNGNGYEPIDNGAYYVDPPQGRP 301
K Y +G G +P + G YY + P+G+P
Sbjct: 479 KIYCVHGVG-KPTERGYYYTNNPEGQP 504
>SPAC2G11.07c |ptc3||protein phosphatase 2C Ptc3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 414
Score = 25.0 bits (52), Expect = 5.6
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +2
Query: 167 HGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGA 271
HG G+ DN ++ PP + NG + D A
Sbjct: 321 HGPGWRSGDNNKKVIVPPNFHQVKLNGSDGYDKDA 355
>SPBC1683.13c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 618
Score = 25.0 bits (52), Expect = 5.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 462 FFFKHYNMFIYLFR*HKFI*NFEI 391
FF K Y+ F+++FR + FI +FE+
Sbjct: 188 FFLKQYHNFMFVFRDY-FIRDFEL 210
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 24.6 bits (51), Expect = 7.4
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = +3
Query: 171 ETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTSSLPLS 323
ET T + T + + TT+ + T + T T P + T+ LP++
Sbjct: 105 ETTTTPMVETTTITPMVETTTITPMVEAMITLMEETMTTPMEETTTILPMA 155
>SPBC530.14c |dsk1||SR protein-specific kinase
Dsk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 24.6 bits (51), Expect = 7.4
Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Frame = -1
Query: 169 VTRMVIVDHVNVSRIIIIDDVHLSVGHSQQSEDENHEEFHF------YMITSYHRRKY 14
V+ VI + NV++ + + S+ ++ +EN E++H+ Y+ +H R+Y
Sbjct: 24 VSEKVITNGKNVNKKVNAEVDGKSMVEKVKTHEENAEDYHYGGYHPVYIGEEFHHRRY 81
>SPCC777.04 |||amino acid transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 521
Score = 24.6 bits (51), Expect = 7.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -2
Query: 459 FFKHYNMFIYLFR*HKFI*NFEIYC*YIISLL 364
FF YN FI+ F+ FI ++ Y+I +L
Sbjct: 470 FFNGYNAFIHGFKYRSFITSYIGIAAYVIMIL 501
>SPAC11D3.10 |||nifs homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 434
Score = 24.6 bits (51), Expect = 7.4
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = +2
Query: 128 PG-HVNVVDNNHPGHGNGYEPIDN---RPYIVNPPKDYNPNGNGYEP 256
PG +V ++DN HP G G+ + N +V Y+ N + + P
Sbjct: 103 PGDNVVILDNEHPNQGFGWIALQNDGLEVRLVPNEGQYHANASTFAP 149
>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 24.2 bits (50), Expect = 9.8
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 188 IDNRPYIVNPPKDYNPNGNGYEPIDNGAY 274
+++ PY+ N D+N NGN P+ +Y
Sbjct: 370 VNSMPYLSNG--DHNNNGNTSSPVSRFSY 396
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 24.2 bits (50), Expect = 9.8
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +2
Query: 173 NGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPFP 325
N Y PI VNP Y P+G G+ V PP+ +P + P P
Sbjct: 982 NPYTPIAVASSTVNPAHTYKPHG--------GSQIVPPPK-QPANRVVPLP 1023
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 24.2 bits (50), Expect = 9.8
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -1
Query: 115 DDVHLSVGHSQQSED-ENHEEFHFYMITSYHRR 20
DD + S HS++SED NH + + +SY ++
Sbjct: 21 DDDYYSNAHSEKSEDHSNHIKVSHFDPSSYKQK 53
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,814,063
Number of Sequences: 5004
Number of extensions: 38372
Number of successful extensions: 120
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 120
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 174340060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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