Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt21b06
         (445 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   3.5  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   4.6  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   8.0  

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 85  PQAGFQYERKQREMIAKE 138
           P +GF  E +Q+E + KE
Sbjct: 639 PISGFDLEPRQKEFLPKE 656


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 15/58 (25%), Positives = 26/58 (44%)
 Frame = +1

Query: 67  DNPTFDPQAGFQYERKQREMIAKEEDLISARIPNKYRDYCAHYLLDYQVCRYKEMPLL 240
           DN T    AGF    K    +   E+  S  +  + R+Y +HY+    +   K+ P++
Sbjct: 429 DNST---SAGFSQTNKT--WLPVNENYKSLNLAAQKREYYSHYVAFKSLSYLKKQPVI 481


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 9/25 (36%), Positives = 10/25 (40%)
 Frame = -2

Query: 393 LTTLVFNDLGSSTNPIFPYSKATFP 319
           + T VFN  G  T    P    T P
Sbjct: 44  VATQVFNRFGDDTESKLPVKAITLP 68


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,156
Number of Sequences: 438
Number of extensions: 2062
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11574126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)