Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt21b02
(657 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1604.20c |tea2|klp4|kinesin-like protein Tea2|Schizosaccharo... 104 1e-23
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 101 7e-23
SPBC2F12.13 |klp5|sot1|kinesin-like protein Klp5|Schizosaccharom... 98 1e-21
SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein Klp6|S... 93 3e-20
SPAC1834.07 |klp3|krp1|kinesin-like protein Klp3|Schizosaccharom... 89 5e-19
SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces ... 71 2e-13
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 70 3e-13
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 69 8e-13
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 43 4e-05
SPBC32F12.10 |||phosphoglucomutase |Schizosaccharomyces pombe|ch... 28 1.0
SPCC1281.02c |spf30||splicing factor Spf30 |Schizosaccharomyces ... 28 1.0
SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|c... 28 1.4
SPACUNK4.13c |||GTPase Ylf2 |Schizosaccharomyces pombe|chr 1|||M... 27 1.8
SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3 |Schiz... 27 2.4
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 26 5.5
SPBC16G5.05c |||MSP domain|Schizosaccharomyces pombe|chr 2|||Manual 26 5.5
SPAC22E12.01 ||SPAC890.09|triose phosphate transporter |Schizosa... 25 7.3
SPAC18G6.07c |mra1||ribosome biogenesis protein Mra1|Schizosacch... 25 7.3
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 9.6
SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pomb... 25 9.6
SPBC56F2.08c |||RNA-binding protein|Schizosaccharomyces pombe|ch... 25 9.6
>SPBC1604.20c |tea2|klp4|kinesin-like protein
Tea2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 104 bits (250), Expect = 1e-23
Identities = 46/107 (42%), Positives = 66/107 (61%)
Frame = +3
Query: 333 YAYDAVFDSNTSQMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTGKTYTMAGSSTAPELR 512
Y ++ VF + DIY ++ +V V GYNG +FAYG TGTGKTY+M G+ P
Sbjct: 179 YLFNNVFGMESKNYDIYKRSVKSVVRNVFSGYNGIVFAYGMTGTGKTYSMQGTENEP--- 235
Query: 513 GIIPNSFAHIFSHIAKAKDDEKFLVCVTYLEIYNEEVRDLLGNNPHQ 653
GIIP + +F + DD+ F + ++YLEIYNE +RDL+GN+ +
Sbjct: 236 GIIPLAMNDLFEMVENNSDDDTFQIRISYLEIYNERIRDLIGNSDEE 282
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 101 bits (243), Expect = 7e-23
Identities = 54/141 (38%), Positives = 81/141 (57%), Gaps = 5/141 (3%)
Frame = +3
Query: 228 REKMDGSYNCVSVDSVNGTVAVTRNNVTPPEPPRVYAYDAVFDSNTSQMDIYVQTASPIV 407
+E D S VS G +++ + + YA+D VF Q+ ++ + +P++
Sbjct: 85 QEVRDNSSLAVSTSGAMGAELAIQSDPSSMLVTKTYAFDKVFGPEADQLMLFENSVAPML 144
Query: 408 EQVLKGYNGTIFAYGQTGTGKTYTMAG-----SSTAPELRGIIPNSFAHIFSHIAKAKDD 572
EQVL GYN TIFAYGQTGTGKTYTM+G E G+IP + +FS + + +
Sbjct: 145 EQVLNGYNCTIFAYGQTGTGKTYTMSGDLSDSDGILSEGAGLIPRALYQLFSSLDNS--N 202
Query: 573 EKFLVCVTYLEIYNEEVRDLL 635
+++ V +Y E+YNEE+RDLL
Sbjct: 203 QEYAVKCSYYELYNEEIRDLL 223
>SPBC2F12.13 |klp5|sot1|kinesin-like protein
Klp5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 883
Score = 97.9 bits (233), Expect = 1e-21
Identities = 46/109 (42%), Positives = 72/109 (66%), Gaps = 1/109 (0%)
Frame = +3
Query: 333 YAYDAVFDSNTSQMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTGKTYTMAGSSTAPELR 512
YA+D VFD +Q +Y +TA P+++ +L G+N TIFAYG TG GKT+T++G+ P
Sbjct: 105 YAFDRVFDETATQQQVYERTARPLLDNILDGFNATIFAYGATGCGKTHTISGTMQDP--- 161
Query: 513 GIIPNSFAHIFSHIAKAKDDEKFLVCVTYLEIYNEEVRDLL-GNNPHQS 656
G+I + +F + +D++ F + ++YLEIYNE +RDLL P+Q+
Sbjct: 162 GLIYLTLKELFERMDHLRDEKIFDLRLSYLEIYNETIRDLLVSPTPNQA 210
>SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein
Klp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 93.1 bits (221), Expect = 3e-20
Identities = 45/105 (42%), Positives = 65/105 (61%)
Frame = +3
Query: 333 YAYDAVFDSNTSQMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTGKTYTMAGSSTAPELR 512
YA+D +F SQ D+Y T P+++ VL+GYN T+FAYG TG GKT+T++G P+
Sbjct: 95 YAFDRLFGEEASQEDVYKGTTEPLLDSVLQGYNATVFAYGATGCGKTHTISG---RPDDP 151
Query: 513 GIIPNSFAHIFSHIAKAKDDEKFLVCVTYLEIYNEEVRDLLGNNP 647
GII + + + K + V+YLEIYNE++RDLL +P
Sbjct: 152 GIIFLTMRALLDRVEGLKRTMNVDISVSYLEIYNEKIRDLLVQDP 196
>SPAC1834.07 |klp3|krp1|kinesin-like protein
Klp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 554
Score = 89.0 bits (211), Expect = 5e-19
Identities = 41/101 (40%), Positives = 60/101 (59%)
Frame = +3
Query: 333 YAYDAVFDSNTSQMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTGKTYTMAGSSTAPELR 512
+ +D VF +++Q DI+ + V+ + GYNGT+ AYGQTG+GKTYTM G E
Sbjct: 45 FVFDRVFHPSSTQNDIFSYSIESTVDDLFLGYNGTVLAYGQTGSGKTYTMMGIENNFEKE 104
Query: 513 GIIPNSFAHIFSHIAKAKDDEKFLVCVTYLEIYNEEVRDLL 635
G+ P IF I + ++ V V+Y+EIY E++ DLL
Sbjct: 105 GMTPRMLRRIFDKIRDSPSTTEYEVKVSYMEIYMEKIHDLL 145
>SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 511
Score = 70.5 bits (165), Expect = 2e-13
Identities = 55/165 (33%), Positives = 75/165 (45%), Gaps = 18/165 (10%)
Frame = +3
Query: 216 PMDQREKMDGSYNCVSVDSVNGTVAVT--------RNNVTPPEPPRVYAYDAVF------ 353
P RE + + +SVDS N TV +T + PR +A+D F
Sbjct: 14 PKSLRELSKSAEDLLSVDSHNKTVTITPPKHGLKHSRHKNRVNGPRTFAFDECFAPSAPE 73
Query: 354 DSNTS-QMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTGKTYTMAGSSTAPELRGIIPNS 530
N S Q D+Y T +V+ +L+G+N YGQ GTGKTY++ G P GIIP+
Sbjct: 74 SKNLSGQEDVYESTGPLLVKSILEGFNSCFITYGQKGTGKTYSVVGLRGQP---GIIPHI 130
Query: 531 FAHIFSHIAKAK---DDEKFLVCVTYLEIYNEEVRDLLGNNPHQS 656
IF I K K + V ++ EI E DLL N + S
Sbjct: 131 SESIFEEIDKLKKKSPNTTITVSISLAEIIEETPYDLLQPNVNSS 175
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 69.7 bits (163), Expect = 3e-13
Identities = 36/102 (35%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Frame = +3
Query: 333 YAYDAVFDSNTSQMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTGKTYTMAGSSTAPELR 512
+++D VF + ++ + S +++ + GYN +IFAYGQTG+GKTYTM+
Sbjct: 537 FSFDRVFAPESDNSSVF-EEISQLIQSAIDGYNVSIFAYGQTGSGKTYTMSSQD------ 589
Query: 513 GIIPNSFAHIFSHIAKAKDDE-KFLVCVTYLEIYNEEVRDLL 635
G+I S HIF++++ ++ + + +LEIYNE + DLL
Sbjct: 590 GMIAMSIKHIFNYLSTLREKGWVYKLRGQFLEIYNETIYDLL 631
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 68.5 bits (160), Expect = 8e-13
Identities = 37/104 (35%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
Frame = +3
Query: 333 YAYDAVFDSNTSQMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTGKTYTMAGSSTAPELR 512
+ +D VF T+ D++ + S +++ + GYN IFAYGQTG+GKT+TM+ ++
Sbjct: 525 FNFDRVFSPETTNEDVFNEL-SQLIQSAMDGYNVCIFAYGQTGSGKTHTMSSNT------ 577
Query: 513 GIIPNSFAHIFSHIAKAKD-DEKFLVCVTYLEIYNEEVRDLLGN 641
G+IP+S I++ K+ ++ + +LEIYNE + DLL +
Sbjct: 578 GMIPSSVRMIYNRSTSLKERGWEYRMEGQFLEIYNETIIDLLAS 621
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 42.7 bits (96), Expect = 4e-05
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 336 AYDAVFDSNTSQMDIYVQTASPIVEQVLKGYNGTI-FAYGQTGTGKTYTMAGSSTAP 503
++ VF + +Q+D++ +P++ L N T+ F G +G GKTYT+ G S P
Sbjct: 55 SFTKVFPPSCTQLDVFSTICAPLIADSLVNMNDTLLFTLGVSGAGKTYTLFGPSDRP 111
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/40 (30%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +3
Query: 519 IPNSFAHIFSHIAKAKDDE-KFLVCVTYLEIYNEEVRDLL 635
+PN+ + SH K ++ ++ + +++ EIYN+ + DLL
Sbjct: 164 VPNT-EYYASHFPKIEEKNYQYAIYLSFAEIYNDRIFDLL 202
>SPBC32F12.10 |||phosphoglucomutase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 554
Score = 28.3 bits (60), Expect = 1.0
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 2/135 (1%)
Frame = +3
Query: 24 KEQCNKLGRDY*FFALYLKQKLKRN*ILI*VSRICVGASESTKMPDAELSAPTVENXXXX 203
K+ N GR F++ Y ++L+ + R+ A + +K+ +A L V
Sbjct: 409 KDFYNIYGRT--FYSRYDYEELENEAAGKVMDRMRAIADDKSKVGEAVLPGFVVSEAGDF 466
Query: 204 XXXXPMDQRE-KMDGSYNCVSVDSVNGTVAVTRNNVTPPEPPRVYAYDAVFDSNTSQMDI 380
P+D E K G Y + NG+ VTR + T + Y +S++S+ D+
Sbjct: 467 EYHDPIDGSESKHQGLY----IKFENGSRIVTRLSGTGSSGATLRLYMEKHESDSSKFDL 522
Query: 381 YVQTA-SPIVEQVLK 422
Q A P+V L+
Sbjct: 523 DAQVALKPVVHAALE 537
>SPCC1281.02c |spf30||splicing factor Spf30 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 311
Score = 28.3 bits (60), Expect = 1.0
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = -1
Query: 357 SRRQHRKHKREAALEASRCSWSQPQSR 277
S++Q ++ K +AALEAS+ SW Q +R
Sbjct: 229 SQKQQKQLKPKAALEASQNSWKQFAAR 255
>SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 27.9 bits (59), Expect = 1.4
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Frame = +1
Query: 280 GLWL*PGTT*RLQ---SRLAFMLTMLSSTLTPVRWTYTSKRPARLSSKSSKGTTALYSRT 450
GLW+ P L S F+ +L ++ TP + T RP S++S+G +
Sbjct: 110 GLWVPPADALALAKDYSMTPFINALLEASSTPSTYA-TPSRPTAQKSETSEGEPESSTSA 168
Query: 451 GRREQGRPIQWRAAARLQNS 510
R + R A L+NS
Sbjct: 169 TTTSVARRTRQRLAEHLENS 188
>SPACUNK4.13c |||GTPase Ylf2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 407
Score = 27.5 bits (58), Expect = 1.8
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = +3
Query: 396 SPIVEQVLKGYNGTIFAYGQTGTGK---TYTMAGSSTAPELRGIIPNSFAHIF--SHIAK 560
S + E + GY+ + T + K +T+A S AP+ GII + F F + K
Sbjct: 308 SQLSEIICAGYSALNLIHYFTASEKIVQAWTIADGSKAPDAAGIIHSDFKKKFVAGEVIK 367
Query: 561 AKDDEKF 581
D EK+
Sbjct: 368 FSDFEKY 374
>SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1253
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = -3
Query: 532 NEFGMIPLSSGAVLL--PAIV*VFPVPVCPY 446
N+FG+IP+ G+ LL P + P P+C Y
Sbjct: 384 NDFGLIPVIDGSSLLVTPLSLCNIPPPMCRY 414
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 25.8 bits (54), Expect = 5.5
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +2
Query: 404 CRASPQRVQRHYIRVRADGNREDLYNGGQQHGSRTQGDHTELVCTHLQSH 553
CR P+ + Y ADG LYNG + +R V +H+Q+H
Sbjct: 423 CRIPPETMASLYCGPEADGKYVCLYNGCNKRIARKYN-----VESHIQTH 467
>SPBC16G5.05c |||MSP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 383
Score = 25.8 bits (54), Expect = 5.5
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 312 PPEPPRVYAYDAVFDSNTSQMDIYVQTASPIVEQV 416
PP P + A + FD+ + D + ++P VE+V
Sbjct: 276 PPVPQNLSAVNEEFDTKKNDFDSKLPESTPAVEKV 310
>SPAC22E12.01 ||SPAC890.09|triose phosphate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 25.4 bits (53), Expect = 7.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 331 FMLTMLSSTLTPVRWTYTSK 390
F+L M SS L+ +RW T K
Sbjct: 206 FLLVMASSVLSGLRWALTQK 225
>SPAC18G6.07c |mra1||ribosome biogenesis protein
Mra1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 359
Score = 25.4 bits (53), Expect = 7.3
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = +3
Query: 258 VSVDSVNGT---VAVTRNNVTPPEPPRVYAYDAVFDSNTSQMDIYVQTASP 401
+S+ SVNG + V +N VT PP FD+ T Y++T P
Sbjct: 255 LSIRSVNGNEKLLKVIKNPVTDYLPPNCRKATLSFDAPTVPPRKYLETLQP 305
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.0 bits (52), Expect = 9.6
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +3
Query: 381 YVQTASPIVEQVLKGY--NGTIFAYGQTGTGKTYTM 482
+ ++ ++EQ+ G N + G+TGTGKT T+
Sbjct: 449 FTSSSLGLLEQLAAGVQTNEPLLLVGETGTGKTTTI 484
>SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1919
Score = 25.0 bits (52), Expect = 9.6
Identities = 15/81 (18%), Positives = 30/81 (37%), Gaps = 3/81 (3%)
Frame = +3
Query: 402 IVEQVLKGYNGTIFAYGQTGTGKTYTM---AGSSTAPELRGIIPNSFAHIFSHIAKAKDD 572
++ + K Y + Y T T+ A S P R ++ + HI +
Sbjct: 875 LIPYISKSYAFLAYLYQSKPTSVLDTIIKRAAESGDPNCRAVLILAVGHILKKVGSGVPQ 934
Query: 573 EKFLVCVTYLEIYNEEVRDLL 635
+ L+++N + DL+
Sbjct: 935 TTLITAYQLLKVFNTDSNDLV 955
>SPBC56F2.08c |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 661
Score = 25.0 bits (52), Expect = 9.6
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = -2
Query: 554 YVTEDVCKRVRYDPPEFWSRAAARHCIGLPCSRLPVREYSAVVPFED 414
YV + C R +Y F ARHC + SR R A + E+
Sbjct: 280 YVAQ-CCLRFKYPKNTFLFEVMARHCCEIGQSRFGARAIRACLENEN 325
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,703,069
Number of Sequences: 5004
Number of extensions: 54234
Number of successful extensions: 189
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 182
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 297805304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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