Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt20p17
(761 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 25 0.58
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 24 1.3
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 24 1.8
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 4.1
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 4.1
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 23 4.1
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 22 7.1
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 22 7.1
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 7.1
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 21 9.4
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 21 9.4
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 9.4
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 25.4 bits (53), Expect = 0.58
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = -1
Query: 701 AHMSAVMPPASGSSTVTP--RATRYATTAV*PNCAARCRHAQPSASRSEGSAPARTSSTV 528
A ++ P S +++VTP R RY A P A + A PS+ S S P T + +
Sbjct: 82 ADLAEASQPTSTTTSVTPSCRRQRYNIAAANPLLAEKL--AAPSSQASPTSIPYATRAEI 139
Score = 25.0 bits (52), Expect = 0.77
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -2
Query: 724 PQLQPSSLPT*APSCHLHQVHPQSHLVPLGTPP 626
P + PS+ PS H HQ HP + G+ P
Sbjct: 302 PGVYPSTAGFLPPSYHPHQHHPSQYHPHRGSSP 334
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 24.2 bits (50), Expect = 1.3
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -2
Query: 679 HLHQVHPQSHLVPLGTPPQQCD 614
H + P +HL+ L +PP+ D
Sbjct: 45 HYERFSPSTHLMDLSSPPEHRD 66
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 23.8 bits (49), Expect = 1.8
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +2
Query: 587 RAYTWQHNSVTLLW 628
+ YTW+H SV + W
Sbjct: 386 KQYTWRHTSVLIGW 399
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.6 bits (46), Expect = 4.1
Identities = 9/19 (47%), Positives = 11/19 (57%), Gaps = 1/19 (5%)
Frame = -3
Query: 702 CPHE-RRHATCIRFIHSHT 649
CP E + C+RFI HT
Sbjct: 480 CPPEIHKSCICVRFIAEHT 498
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.6 bits (46), Expect = 4.1
Identities = 9/19 (47%), Positives = 11/19 (57%), Gaps = 1/19 (5%)
Frame = -3
Query: 702 CPHE-RRHATCIRFIHSHT 649
CP E + C+RFI HT
Sbjct: 480 CPPEIHKSCICVRFIAEHT 498
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 22.6 bits (46), Expect = 4.1
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 151 LSCTMMYDSTCGAAATGQCGPA 216
++CT S+ G + G+CGPA
Sbjct: 156 VNCTSSIASS-GVVSAGECGPA 176
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.8 bits (44), Expect = 7.1
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 342 RSWLGREPTRRRNGDL 389
RSWL + PTR + D+
Sbjct: 402 RSWLSKFPTRSKRIDV 417
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.8 bits (44), Expect = 7.1
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 342 RSWLGREPTRRRNGDL 389
RSWL + PTR + D+
Sbjct: 402 RSWLSKFPTRSKRIDV 417
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.8 bits (44), Expect = 7.1
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -2
Query: 214 QGHTGQSPLHH 182
+GH+GQS HH
Sbjct: 395 RGHSGQSSSHH 405
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 21.4 bits (43), Expect = 9.4
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = -2
Query: 208 HTGQSPLHHKYC 173
HTG+ P H +C
Sbjct: 32 HTGEKPYHCSHC 43
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 21.4 bits (43), Expect = 9.4
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -2
Query: 208 HTGQSPLHHKYCRTS 164
HTG+ P +YC S
Sbjct: 114 HTGEKPYQCEYCSKS 128
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.4 bits (43), Expect = 9.4
Identities = 10/34 (29%), Positives = 13/34 (38%)
Frame = -1
Query: 590 HAQPSASRSEGSAPARTSSTVASRCPCRVAQCSG 489
H P + SAP ++ CP R SG
Sbjct: 512 HVAPPSGHHASSAPLLAATLAGGLCPHRRRANSG 545
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,356
Number of Sequences: 438
Number of extensions: 4380
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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