Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt20p14
         (300 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001461-1|AAN71216.1|   56|Drosophila melanogaster GM20929p pro...    62   1e-10
AE013599-856|AAZ52820.1|   40|Drosophila melanogaster CG33774-PA...    60   4e-10
AY118993-1|AAM50853.1|  226|Drosophila melanogaster LP02768p pro...    26   7.7  
AE013599-581|AAF59142.1|  226|Drosophila melanogaster CG8717-PA ...    26   7.7  

>BT001461-1|AAN71216.1|   56|Drosophila melanogaster GM20929p
           protein.
          Length = 56

 Score = 62.5 bits (145), Expect = 1e-10
 Identities = 26/35 (74%), Positives = 32/35 (91%)
 Frame = +1

Query: 94  KMITDIQLAVFSNILGVSIFLLVILYHYINANSSK 198
           KMITD+QLA+FSN+LGV +FLLV+ YHYINAN+ K
Sbjct: 16  KMITDVQLAIFSNVLGVFLFLLVVAYHYINANTGK 50


>AE013599-856|AAZ52820.1|   40|Drosophila melanogaster CG33774-PA
           protein.
          Length = 40

 Score = 60.5 bits (140), Expect = 4e-10
 Identities = 25/34 (73%), Positives = 31/34 (91%)
 Frame = +1

Query: 97  MITDIQLAVFSNILGVSIFLLVILYHYINANSSK 198
           MITD+QLA+FSN+LGV +FLLV+ YHYINAN+ K
Sbjct: 1   MITDVQLAIFSNVLGVFLFLLVVAYHYINANTGK 34


>AY118993-1|AAM50853.1|  226|Drosophila melanogaster LP02768p
           protein.
          Length = 226

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +1

Query: 97  MITDIQLAVFSNILGVSIFLLVILYHYI-NANSSK*YRSIAAIVKALVSLI 246
           ++T+ Q  V  NI+G ++FL+  L +Y+   N     +    ++  LV +I
Sbjct: 61  VLTNEQSIVLVNIIGSTLFLVYTLIYYVFTVNKRACVKQFGFVLTVLVVVI 111


>AE013599-581|AAF59142.1|  226|Drosophila melanogaster CG8717-PA
           protein.
          Length = 226

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +1

Query: 97  MITDIQLAVFSNILGVSIFLLVILYHYI-NANSSK*YRSIAAIVKALVSLI 246
           ++T+ Q  V  NI+G ++FL+  L +Y+   N     +    ++  LV +I
Sbjct: 61  VLTNEQSIVLVNIIGSTLFLVYTLIYYVFTVNKRACVKQFGFVLTVLVVVI 111


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,117,531
Number of Sequences: 53049
Number of extensions: 207394
Number of successful extensions: 329
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 329
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 549010566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)