Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt20p12
(297 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC042617-1|AAH42617.1| 354|Homo sapiens retinaldehyde binding p... 42 4e-04
AY094971-1|AAM15733.1| 354|Homo sapiens cellular retinaldehyde-... 42 4e-04
BC101377-1|AAI01378.1| 327|Homo sapiens retinaldehyde binding p... 38 0.008
BC101376-1|AAI01377.1| 327|Homo sapiens retinaldehyde binding p... 38 0.008
AL591428-2|CAI12306.1| 327|Homo sapiens protein ( to hypothetic... 38 0.008
AL591428-3|CAI12307.1| 181|Homo sapiens protein ( to hypothetic... 37 0.010
L34219-1|AAA65123.1| 317|Homo sapiens retinaldehyde-binding pro... 36 0.018
J04213-1|AAA60251.1| 317|Homo sapiens RLBP1 protein. 36 0.018
BC004199-1|AAH04199.1| 317|Homo sapiens retinaldehyde binding p... 36 0.018
U21938-1|AAA64309.1| 278|Homo sapiens alpha-tocopherol transfer... 35 0.054
D49488-1|BAA08449.1| 278|Homo sapiens alpha-tocopherol transfer... 35 0.054
BC058000-1|AAH58000.1| 278|Homo sapiens tocopherol (alpha) tran... 35 0.054
M12413-1|AAA51742.1| 836|Homo sapiens APOB protein. 28 6.2
X99802-1|CAA68137.1| 766|Homo sapiens ZYG homologue protein. 27 8.2
BC052563-1|AAH52563.1| 766|Homo sapiens zer-1 homolog (C. elega... 27 8.2
BC033884-1|AAH33884.1| 195|Homo sapiens ZER1 protein protein. 27 8.2
AL441992-9|CAI15409.1| 101|Homo sapiens zer-1 homolog (C. elega... 27 8.2
AL441992-8|CAI15408.1| 165|Homo sapiens zer-1 homolog (C. elega... 27 8.2
AL441992-7|CAI15407.1| 766|Homo sapiens zer-1 homolog (C. elega... 27 8.2
>BC042617-1|AAH42617.1| 354|Homo sapiens retinaldehyde binding
protein 1-like 1 protein.
Length = 354
Score = 41.9 bits (94), Expect = 4e-04
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +1
Query: 10 DVKNFDFATSIKGIFMALD-LWQYEEGTWPGLIFIFDLQGIKMGLLSKLDIQNLQQFAAY 186
D F ++ I ++L+ L + E G I I D SKL L+
Sbjct: 149 DQSRNSFTDILRAILLSLEVLIEDPELQINGFILIIDWSNFSFKQASKLTPSILKLAIEG 208
Query: 187 FPEALLAKFNGVHFINMPLFMDRINTLIKVFHK 285
++ A+F GVHF+N P ++ + TLIK F K
Sbjct: 209 LQDSFPARFGGVHFVNQPWYIHALYTLIKPFLK 241
>AY094971-1|AAM15733.1| 354|Homo sapiens cellular
retinaldehyde-binding protein-like protein protein.
Length = 354
Score = 41.9 bits (94), Expect = 4e-04
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +1
Query: 10 DVKNFDFATSIKGIFMALD-LWQYEEGTWPGLIFIFDLQGIKMGLLSKLDIQNLQQFAAY 186
D F ++ I ++L+ L + E G I I D SKL L+
Sbjct: 149 DQSRNSFTDILRAILLSLEVLIEDPELQINGFILIIDWSNFSFKQASKLTPSILKLAIEG 208
Query: 187 FPEALLAKFNGVHFINMPLFMDRINTLIKVFHK 285
++ A+F GVHF+N P ++ + TLIK F K
Sbjct: 209 LQDSFPARFGGVHFVNQPWYIHALYTLIKPFLK 241
>BC101377-1|AAI01378.1| 327|Homo sapiens retinaldehyde binding
protein 1-like 2 protein.
Length = 327
Score = 37.5 bits (83), Expect = 0.008
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +1
Query: 10 DVKNFDFATSIKGIFMALD-LWQYEEGTWPGLIFIFDLQGIKMGLLSKLDIQNLQQFAAY 186
D + ++ I ++L+ + + E G + I D SKL L+
Sbjct: 127 DQSRYTLVDILRAILLSLEAMIEDPELQVNGFVLIIDWSNFTFKQASKLTPSMLRLAIEG 186
Query: 187 FPEALLAKFNGVHFINMPLFMDRINTLIKVFHK 285
++ A+F G+HF+N P ++ + T+I+ F K
Sbjct: 187 LQDSFPARFGGIHFVNQPWYIHALYTVIRPFLK 219
>BC101376-1|AAI01377.1| 327|Homo sapiens retinaldehyde binding
protein 1-like 2 protein.
Length = 327
Score = 37.5 bits (83), Expect = 0.008
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +1
Query: 10 DVKNFDFATSIKGIFMALD-LWQYEEGTWPGLIFIFDLQGIKMGLLSKLDIQNLQQFAAY 186
D + ++ I ++L+ + + E G + I D SKL L+
Sbjct: 127 DQSRYTLVDILRAILLSLEAMIEDPELQVNGFVLIIDWSNFTFKQASKLTPSMLRLAIEG 186
Query: 187 FPEALLAKFNGVHFINMPLFMDRINTLIKVFHK 285
++ A+F G+HF+N P ++ + T+I+ F K
Sbjct: 187 LQDSFPARFGGIHFVNQPWYIHALYTVIRPFLK 219
>AL591428-2|CAI12306.1| 327|Homo sapiens protein ( to hypothetical
proteins from ).).
Length = 327
Score = 37.5 bits (83), Expect = 0.008
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +1
Query: 10 DVKNFDFATSIKGIFMALD-LWQYEEGTWPGLIFIFDLQGIKMGLLSKLDIQNLQQFAAY 186
D + ++ I ++L+ + + E G + I D SKL L+
Sbjct: 127 DQSRYTLVDILRAILLSLEAMIEDPELQVNGFVLIIDWSNFTFKQASKLTPSMLRLAIEG 186
Query: 187 FPEALLAKFNGVHFINMPLFMDRINTLIKVFHK 285
++ A+F G+HF+N P ++ + T+I+ F K
Sbjct: 187 LQDSFPARFGGIHFVNQPWYIHALYTVIRPFLK 219
>AL591428-3|CAI12307.1| 181|Homo sapiens protein ( to hypothetical
proteins from ).).
Length = 181
Score = 37.1 bits (82), Expect = 0.010
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +1
Query: 97 GLIFIFDLQGIKMGLLSKLDIQNLQQFAAYFPEALLAKFNGVHFINMPLFMDRINTLIKV 276
G + I D SKL L+ ++ A+F G+HF+N P ++ + T+I+
Sbjct: 11 GFVLIIDWSNFTFKQASKLTPSMLRLAIEGLQDSFPARFGGIHFVNQPWYIHALYTVIRP 70
Query: 277 FHK 285
F K
Sbjct: 71 FLK 73
>L34219-1|AAA65123.1| 317|Homo sapiens retinaldehyde-binding
protein protein.
Length = 317
Score = 36.3 bits (80), Expect = 0.018
Identities = 19/82 (23%), Positives = 38/82 (46%)
Frame = +1
Query: 52 FMALDLWQYEEGTWPGLIFIFDLQGIKMGLLSKLDIQNLQQFAAYFPEALLAKFNGVHFI 231
F+ L + EE G I + +G M + L +L++ ++ A+F +HFI
Sbjct: 182 FILEKLLENEETQINGFCIIENFKGFTMQQAASLRTSDLRKMVDMLQDSFPARFKAIHFI 241
Query: 232 NMPLFMDRINTLIKVFHKTEFI 297
+ P + ++K F K++ +
Sbjct: 242 HQPWYFTTTYNVVKPFLKSKLL 263
>J04213-1|AAA60251.1| 317|Homo sapiens RLBP1 protein.
Length = 317
Score = 36.3 bits (80), Expect = 0.018
Identities = 19/82 (23%), Positives = 38/82 (46%)
Frame = +1
Query: 52 FMALDLWQYEEGTWPGLIFIFDLQGIKMGLLSKLDIQNLQQFAAYFPEALLAKFNGVHFI 231
F+ L + EE G I + +G M + L +L++ ++ A+F +HFI
Sbjct: 182 FILEKLLENEETQINGFCIIENFKGFTMQQAASLRTSDLRKMVDMLQDSFPARFKAIHFI 241
Query: 232 NMPLFMDRINTLIKVFHKTEFI 297
+ P + ++K F K++ +
Sbjct: 242 HQPWYFTTTYNVVKPFLKSKLL 263
>BC004199-1|AAH04199.1| 317|Homo sapiens retinaldehyde binding
protein 1 protein.
Length = 317
Score = 36.3 bits (80), Expect = 0.018
Identities = 19/82 (23%), Positives = 38/82 (46%)
Frame = +1
Query: 52 FMALDLWQYEEGTWPGLIFIFDLQGIKMGLLSKLDIQNLQQFAAYFPEALLAKFNGVHFI 231
F+ L + EE G I + +G M + L +L++ ++ A+F +HFI
Sbjct: 182 FILEKLLENEETQINGFCIIENFKGFTMQQAASLRTSDLRKMVDMLQDSFPARFKAIHFI 241
Query: 232 NMPLFMDRINTLIKVFHKTEFI 297
+ P + ++K F K++ +
Sbjct: 242 HQPWYFTTTYNVVKPFLKSKLL 263
>U21938-1|AAA64309.1| 278|Homo sapiens alpha-tocopherol transfer
protein protein.
Length = 278
Score = 34.7 bits (76), Expect = 0.054
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +1
Query: 97 GLIFIFDLQGIKMGLLSKLDIQNLQQFAAYFPEALLAKFNGVHFINMPLFMDRINTLIKV 276
G+ IFDL+G + ++ ++ AA ++ K G+H IN P+ + ++IK
Sbjct: 153 GIKAIFDLEGWQFSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKP 212
Query: 277 F 279
F
Sbjct: 213 F 213
>D49488-1|BAA08449.1| 278|Homo sapiens alpha-tocopherol transfer
protein protein.
Length = 278
Score = 34.7 bits (76), Expect = 0.054
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +1
Query: 97 GLIFIFDLQGIKMGLLSKLDIQNLQQFAAYFPEALLAKFNGVHFINMPLFMDRINTLIKV 276
G+ IFDL+G + ++ ++ AA ++ K G+H IN P+ + ++IK
Sbjct: 153 GIKAIFDLEGWQFSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKP 212
Query: 277 F 279
F
Sbjct: 213 F 213
>BC058000-1|AAH58000.1| 278|Homo sapiens tocopherol (alpha)
transfer protein protein.
Length = 278
Score = 34.7 bits (76), Expect = 0.054
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +1
Query: 97 GLIFIFDLQGIKMGLLSKLDIQNLQQFAAYFPEALLAKFNGVHFINMPLFMDRINTLIKV 276
G+ IFDL+G + ++ ++ AA ++ K G+H IN P+ + ++IK
Sbjct: 153 GIKAIFDLEGWQFSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKP 212
Query: 277 F 279
F
Sbjct: 213 F 213
>M12413-1|AAA51742.1| 836|Homo sapiens APOB protein.
Length = 836
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 36 QYQGYLYGTGPMAI*RRNVARTDLHLRFARNKNGL 140
+Y+G G + ++ A TDLHLR+ ++K G+
Sbjct: 236 KYEGLQEWEGKAHLNIKSPASTDLHLRYQKDKKGI 270
>X99802-1|CAA68137.1| 766|Homo sapiens ZYG homologue protein.
Length = 766
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -2
Query: 179 ANCCKFCISNLDNKPIFIPCKSKMKISPG-HVPSSYCHR 66
A C FC+ NLD ++ K +++ P +PS C R
Sbjct: 11 ALCTDFCLRNLDGTLGYLLDKETLRLHPDIFLPSEICDR 49
>BC052563-1|AAH52563.1| 766|Homo sapiens zer-1 homolog (C. elegans)
protein.
Length = 766
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -2
Query: 179 ANCCKFCISNLDNKPIFIPCKSKMKISPG-HVPSSYCHR 66
A C FC+ NLD ++ K +++ P +PS C R
Sbjct: 11 ALCTDFCLRNLDGTLGYLLDKETLRLHPDIFLPSEICDR 49
>BC033884-1|AAH33884.1| 195|Homo sapiens ZER1 protein protein.
Length = 195
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -2
Query: 179 ANCCKFCISNLDNKPIFIPCKSKMKISPG-HVPSSYCHR 66
A C FC+ NLD ++ K +++ P +PS C R
Sbjct: 11 ALCTDFCLRNLDGTLGYLLDKETLRLHPDIFLPSEICDR 49
>AL441992-9|CAI15409.1| 101|Homo sapiens zer-1 homolog (C. elegans)
protein.
Length = 101
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -2
Query: 179 ANCCKFCISNLDNKPIFIPCKSKMKISPG-HVPSSYCHR 66
A C FC+ NLD ++ K +++ P +PS C R
Sbjct: 11 ALCTDFCLRNLDGTLGYLLDKETLRLHPDIFLPSEICDR 49
>AL441992-8|CAI15408.1| 165|Homo sapiens zer-1 homolog (C. elegans)
protein.
Length = 165
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -2
Query: 179 ANCCKFCISNLDNKPIFIPCKSKMKISPG-HVPSSYCHR 66
A C FC+ NLD ++ K +++ P +PS C R
Sbjct: 11 ALCTDFCLRNLDGTLGYLLDKETLRLHPDIFLPSEICDR 49
>AL441992-7|CAI15407.1| 766|Homo sapiens zer-1 homolog (C. elegans)
protein.
Length = 766
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -2
Query: 179 ANCCKFCISNLDNKPIFIPCKSKMKISPG-HVPSSYCHR 66
A C FC+ NLD ++ K +++ P +PS C R
Sbjct: 11 ALCTDFCLRNLDGTLGYLLDKETLRLHPDIFLPSEICDR 49
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,286,812
Number of Sequences: 237096
Number of extensions: 911510
Number of successful extensions: 1982
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1982
length of database: 76,859,062
effective HSP length: 75
effective length of database: 59,076,862
effective search space used: 1358767826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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