Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt20p12
(297 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 25 0.15
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 25 0.15
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 3.2
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 3.2
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 3.2
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 3.2
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 3.2
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 3.2
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 3.2
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 21 3.2
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 4.2
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 20 5.6
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 25.4 bits (53), Expect = 0.15
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +3
Query: 90 VARTDLHLRFARNKNGLIVQIGYTEFTTV 176
VA+ D+ +RF K+G ++ G+ +F V
Sbjct: 248 VAKEDIQVRFFEEKDGQVLWEGFGDFQPV 276
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 25.4 bits (53), Expect = 0.15
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +3
Query: 90 VARTDLHLRFARNKNGLIVQIGYTEFTTV 176
VA+ D+ +RF K+G ++ G+ +F V
Sbjct: 248 VAKEDIQVRFFEEKDGQVLWEGFGDFQPV 276
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 3.2
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 68 YGNMKKERGQD*SSSSICKE*K--WAYCPNWIYRIYNS 175
Y KER +D + CKE K + N+ Y YN+
Sbjct: 59 YRETSKERSRDRTERERCKEPKIISSLSNNYKYSNYNN 96
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 3.2
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 68 YGNMKKERGQD*SSSSICKE*K--WAYCPNWIYRIYNS 175
Y KER +D + CKE K + N+ Y YN+
Sbjct: 59 YRETSKERSRDRTERERCKEPKIISSLSNNYKYSNYNN 96
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 3.2
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 68 YGNMKKERGQD*SSSSICKE*K--WAYCPNWIYRIYNS 175
Y KER +D + CKE K + N+ Y YN+
Sbjct: 59 YRETSKERSRDRTERERCKEPKIISSLSNNYKYSNYNN 96
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 3.2
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 68 YGNMKKERGQD*SSSSICKE*K--WAYCPNWIYRIYNS 175
Y KER +D + CKE K + N+ Y YN+
Sbjct: 59 YRETSKERSRDRTERERCKEPKIISSLSNNYKYSNYNN 96
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 3.2
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 68 YGNMKKERGQD*SSSSICKE*K--WAYCPNWIYRIYNS 175
Y KER +D + CKE K + N+ Y YN+
Sbjct: 59 YRETSKERSRDRTERERCKEPKIISSLSNNYKYSNYNN 96
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 3.2
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 68 YGNMKKERGQD*SSSSICKE*K--WAYCPNWIYRIYNS 175
Y KER +D + CKE K + N+ Y YN+
Sbjct: 59 YRETSKERSRDRTERERCKEPKIISSLSNNYKYSNYNN 96
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 3.2
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 68 YGNMKKERGQD*SSSSICKE*K--WAYCPNWIYRIYNS 175
Y KER +D + CKE K + N+ Y YN+
Sbjct: 59 YRETSKERSRDRTERERCKEPKIISSLSNNYKYSNYNN 96
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.0 bits (42), Expect = 3.2
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = -2
Query: 104 ISPGHVPSSYCHRSSAIKIPLILVAKSKF 18
+ P VPS +C + + + LV S++
Sbjct: 696 LEPSAVPSKFCLSVTLLTVATSLVIVSRY 724
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 20.6 bits (41), Expect = 4.2
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 108 HLRFARNKNGLIVQIGYTEFTTVRSL 185
HLR +N LI IG F +RSL
Sbjct: 867 HLRELYLQNNLIGFIGNLTFLPLRSL 892
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 20.2 bits (40), Expect = 5.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 163 NLQQFAAYFPEA 198
N QQF Y PE+
Sbjct: 391 NTQQFTQYIPES 402
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,620
Number of Sequences: 438
Number of extensions: 1606
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used: 6119169
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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