Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt20p05
         (290 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   0.76 
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   4.1  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   4.1  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    20   7.1  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     20   7.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             20   7.1  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    19   9.4  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.0 bits (47), Expect = 0.76
 Identities = 9/28 (32%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = -1

Query: 83  FLKVNSLESEEQQERHHK-TEQTHSLRQ 3
           F++ +SL  ++QQ++HH+ +   H+  Q
Sbjct: 91  FMQQHSLYLQQQQQQHHQDSSSEHASNQ 118


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 4.1
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 116 SVYYLEWTAMESNVWKPHPHSDART 190
           ++Y L W   +  V+ P  +  ART
Sbjct: 37  NIYELFWHVDQPTVYHPELYQKART 61


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 4.1
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 116 SVYYLEWTAMESNVWKPHPHSDART 190
           ++Y L W   +  V+ P  +  ART
Sbjct: 37  NIYELFWHVDQPTVYHPELYQKART 61


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 5/14 (35%), Positives = 9/14 (64%)
 Frame = +2

Query: 158 WKPHPHSDARTDVC 199
           ++PHPH+    + C
Sbjct: 109 YRPHPHNLVGKEAC 122


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 5/14 (35%), Positives = 9/14 (64%)
 Frame = +2

Query: 158 WKPHPHSDARTDVC 199
           ++PHPH+    + C
Sbjct: 109 YRPHPHNLVGKEAC 122


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 5/20 (25%), Positives = 13/20 (65%)
 Frame = -1

Query: 62   ESEEQQERHHKTEQTHSLRQ 3
            + ++QQ++  + +Q H  R+
Sbjct: 1219 QQQQQQQQQQQQQQQHQARE 1238


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 9/33 (27%), Positives = 13/33 (39%)
 Frame = +2

Query: 131 EWTAMESNVWKPHPHSDARTDVCYTYSARQQEC 229
           EW   E  + K   ++    D   TYS   + C
Sbjct: 75  EWLLTEEKLPKTSSNASVEPDSKVTYSGLWRVC 107


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,682
Number of Sequences: 438
Number of extensions: 1361
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5869407
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)