Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt20p04
(710 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456725-1|CAG33006.1| 360|Homo sapiens JM5 protein. 131 3e-30
BC003037-1|AAH03037.1| 360|Homo sapiens WD repeat domain 45 pro... 131 3e-30
BC000464-1|AAH00464.1| 360|Homo sapiens WD repeat domain 45 pro... 131 3e-30
AY691428-1|AAV80764.1| 360|Homo sapiens WIPI-4 protein. 131 3e-30
AJ005897-1|CAA06754.1| 360|Homo sapiens JM5 protein. 131 3e-30
BC069206-1|AAH69206.1| 361|Homo sapiens WD repeat domain 45 pro... 130 5e-30
AM182326-1|CAJ57996.1| 344|Homo sapiens WDR45-like protein prot... 100 4e-21
BC007838-1|AAH07838.1| 286|Homo sapiens WDR45L protein protein. 60 8e-09
BC000974-1|AAH00974.1| 150|Homo sapiens WDR45L protein protein. 60 8e-09
AY691427-1|AAV80763.1| 286|Homo sapiens WIPI-3 protein. 60 8e-09
AF091083-1|AAC72952.1| 286|Homo sapiens unknown protein. 60 8e-09
CR456770-1|CAG33051.1| 286|Homo sapiens LOC56270 protein. 58 2e-08
BC009027-1|AAH09027.1| 303|Homo sapiens WDR45 protein protein. 58 2e-08
AK131080-1|BAC85130.1| 563|Homo sapiens FLJ00279 protein protein. 37 0.082
AL590103-7|CAI12130.1| 93|Homo sapiens heparan sulfate proteog... 35 0.33
X65018-1|CAA46152.1| 375|Homo sapiens lung surfactant protein D... 33 0.76
M60832-1|AAA62822.1| 635|Homo sapiens alpha-2 type VIII collage... 33 0.76
L05485-1|AAB59450.1| 375|Homo sapiens surfactant protein D prot... 33 0.76
CR541948-1|CAG46746.1| 375|Homo sapiens SFTPD protein. 33 0.76
BC099645-1|AAH99645.1| 657|Homo sapiens COL8A2 protein protein. 33 0.76
BC096297-1|AAH96297.1| 657|Homo sapiens COL8A2 protein protein. 33 0.76
BC063833-1|AAH63833.1| 1336|Homo sapiens collagen, type XVIII, a... 33 0.76
BC033715-1|AAH33715.1| 816|Homo sapiens Similar to collagen, ty... 33 0.76
BC022318-1|AAH22318.1| 375|Homo sapiens surfactant, pulmonary-a... 33 0.76
AY484971-3|AAR83297.1| 1516|Homo sapiens type XVIII collagen mid... 33 0.76
AY484971-2|AAR83296.1| 1751|Homo sapiens type XVIII collagen lon... 33 0.76
AY484971-1|AAR83298.1| 1336|Homo sapiens type XVIII collagen sho... 33 0.76
AY216721-1|AAO22991.1| 375|Homo sapiens surfactant, pulmonary-a... 33 0.76
AL512662-3|CAI14436.1| 375|Homo sapiens surfactant, pulmonary-a... 33 0.76
AL163302-2|CAB90482.1| 1519|Homo sapiens human type XVIII collag... 33 0.76
AL138787-1|CAI22267.1| 703|Homo sapiens collagen type VIII alph... 33 0.76
AK074129-1|BAB84955.1| 705|Homo sapiens FLJ00201 protein protein. 33 0.76
AF018082-1|AAC39659.1| 1336|Homo sapiens type XVIII collagen pro... 33 0.76
AF018081-1|AAC39658.1| 1516|Homo sapiens type XVIII collagen pro... 33 0.76
AK131104-1|BAC85154.1| 2760|Homo sapiens FLJ00341 protein protein. 33 1.3
AB011112-1|BAA25466.3| 2041|Homo sapiens KIAA0540 protein protein. 33 1.3
X15038-1|CAA33142.1| 447|Homo sapiens collagen-like protein pro... 32 1.8
X14963-1|CAA33085.1| 447|Homo sapiens collagen-like protein (44... 32 1.8
S57132-1|AAB25797.1| 1186|Homo sapiens type XVI collagen alpha 1... 32 1.8
M92642-1|AAA58427.1| 1603|Homo sapiens alpha-1 type XVI collagen... 32 1.8
L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein. 32 1.8
L12397-1|AAL58637.1| 350|Homo sapiens Dopamine D4 receptor prot... 32 1.8
L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen... 32 1.8
BC126479-1|AAI26480.1| 200|Homo sapiens chromosome 4 open readi... 32 1.8
BC126477-1|AAI26478.1| 200|Homo sapiens chromosome 4 open readi... 32 1.8
BC117170-1|AAI17171.1| 1714|Homo sapiens collagen, type XXIV, al... 32 1.8
BC113654-1|AAI13655.1| 1714|Homo sapiens collagen, type XXIV, al... 32 1.8
BC016004-1|AAH16004.1| 520|Homo sapiens macrophage receptor wit... 32 1.8
AY244357-1|AAP80185.1| 1714|Homo sapiens alpha 1 type XXIV colla... 32 1.8
AL445427-1|CAI19120.1| 1714|Homo sapiens collagen, type XXIV, al... 32 1.8
AL359971-1|CAI16233.1| 1714|Homo sapiens collagen, type XXIV, al... 32 1.8
AL356059-1|CAH71121.1| 1714|Homo sapiens collagen, type XXIV, al... 32 1.8
AK054839-1|BAB70812.1| 200|Homo sapiens protein ( Homo sapiens ... 32 1.8
AF128186-1|AAD41064.1| 520|Homo sapiens macrophage receptor pro... 32 1.8
AF035819-1|AAC08800.1| 520|Homo sapiens macrophage receptor MAR... 32 1.8
AC013457-1|AAX88875.1| 520|Homo sapiens unknown protein. 32 1.8
AB209686-1|BAD92923.1| 867|Homo sapiens collagen, type XXIV, al... 32 1.8
AB209645-1|BAD92882.1| 1027|Homo sapiens alpha 1 type VII collag... 32 1.8
AB209571-1|BAD92808.1| 1463|Homo sapiens alpha 1 type XVI collag... 32 1.8
Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen... 32 2.3
D79995-1|BAA11490.2| 1203|Homo sapiens KIAA0173 protein. 32 2.3
BC021707-1|AAH21707.1| 1199|Homo sapiens tubulin tyrosine ligase... 32 2.3
Y14690-1|CAA75002.1| 1496|Homo sapiens procollagen alpha 2(V) pr... 31 3.1
X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1 p... 31 3.1
X15332-1|CAA33387.1| 1078|Homo sapiens alpha-1 (III) collagen pr... 31 3.1
X14420-1|CAA32583.1| 1466|Homo sapiens prepro-alpha-1 type 3 col... 31 3.1
X04758-1|CAA28454.1| 1099|Homo sapiens protein ( Human mRNA for ... 31 3.1
M10956-1|AAA52007.1| 225|Homo sapiens COL5A2 protein. 31 3.1
BC086874-1|AAH86874.1| 1139|Homo sapiens COL5A2 protein protein. 31 3.1
BC053850-1|AAH53850.1| 403|Homo sapiens forkhead box Q1 protein. 31 3.1
BC047569-1|AAH47569.1| 253|Homo sapiens membrane-associated rin... 31 3.1
BC043613-1|AAH43613.1| 503|Homo sapiens COL5A2 protein protein. 31 3.1
BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha... 31 3.1
BC028178-1|AAH28178.1| 1163|Homo sapiens COL3A1 protein protein. 31 3.1
AY016295-2|AAL13167.1| 1466|Homo sapiens type III preprocollagen... 31 3.1
AY016295-1|AAL13166.1| 1347|Homo sapiens type V preprocollagen a... 31 3.1
AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha ... 31 3.1
AL499606-1|CAH70503.1| 403|Homo sapiens forkhead box Q1 protein. 31 3.1
AL135842-3|CAI23350.1| 118|Homo sapiens late cornified envelope... 31 3.1
AF225950-1|AAK00639.1| 403|Homo sapiens HNF-3/forkhead-like pro... 31 3.1
AF153341-1|AAF75586.1| 402|Homo sapiens winged helix/forkhead t... 31 3.1
AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen... 31 3.1
AC133106-1|AAY24185.1| 503|Homo sapiens unknown protein. 31 3.1
AC066694-1|AAY24164.1| 1466|Homo sapiens unknown protein. 31 3.1
AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain ... 31 3.1
AB209045-1|BAD92282.1| 1502|Homo sapiens alpha 2 type V collagen... 31 3.1
X16711-1|CAA34683.1| 1160|Homo sapiens COL2A1 protein. 31 4.1
X16468-1|CAA34488.1| 1418|Homo sapiens protein ( Human mRNA for ... 31 4.1
X13783-1|CAA32030.1| 714|Homo sapiens alpha-1 type 2 collagen (... 31 4.1
U07802-1|AAA91778.1| 482|Homo sapiens Tis11d protein. 31 4.1
L10347-1|AAC41772.1| 1487|Homo sapiens alpha-1 type II collagen ... 31 4.1
BC116449-1|AAI16450.1| 1487|Homo sapiens collagen, type II, alph... 31 4.1
BC025710-1|AAH25710.1| 313|Homo sapiens SLC15A3 protein protein. 31 4.1
AL606970-2|CAI14850.1| 774|Homo sapiens RP11-503C24.7 protein. 31 4.1
X80031-1|CAA56335.1| 1670|Homo sapiens type IV collagen alpha 3 ... 31 5.4
U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoi... 31 5.4
M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein. 31 5.4
M63730-1|AAA51839.1| 349|Homo sapiens BPAG2 protein. 31 5.4
J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein. 31 5.4
BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein. 31 5.4
BC110806-1|AAI10807.1| 234|Homo sapiens hypothetical LOC441177 ... 31 5.4
AY358165-1|AAQ88532.1| 422|Homo sapiens LHLL9381 protein. 31 5.4
AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alph... 31 5.4
AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alph... 31 5.4
AK126656-1|BAC86631.1| 146|Homo sapiens protein ( Homo sapiens ... 31 5.4
AK094116-1|BAC04291.1| 234|Homo sapiens protein ( Homo sapiens ... 31 5.4
AJ288487-1|CAC36101.1| 1670|Homo sapiens alpha3 type IV collagen... 31 5.4
AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-... 31 5.4
AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-... 31 5.4
AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-... 31 5.4
AC097662-1|AAY24251.1| 1084|Homo sapiens unknown protein. 31 5.4
AB208844-1|BAD92081.1| 1017|Homo sapiens alpha 1 type XI collage... 31 5.4
D90279-1|BAA14323.1| 1838|Homo sapiens collagen alpha 1(V) chain... 30 7.1
BC151206-1|AAI51207.1| 1837|Homo sapiens KIAA0913 protein protein. 30 7.1
AL512662-5|CAI14438.1| 218|Homo sapiens surfactant, pulmonary-a... 30 7.1
AK055336-1|BAB70904.1| 140|Homo sapiens protein ( Homo sapiens ... 30 7.1
AB020720-1|BAA74936.1| 1301|Homo sapiens KIAA0913 protein protein. 30 7.1
Y19188-1|CAB60727.1| 759|Homo sapiens aczonin protein. 30 9.4
BC125271-1|AAI25272.1| 641|Homo sapiens PCLO protein protein. 30 9.4
BC122565-1|AAI22566.1| 641|Homo sapiens PCLO protein protein. 30 9.4
BC005010-1|AAH05010.1| 497|Homo sapiens ZFP36L2 protein protein. 30 9.4
AY189690-1|AAO85223.1| 131|Homo sapiens transformation-related ... 30 9.4
AC010883-1|AAY14992.1| 494|Homo sapiens unknown protein. 30 9.4
>CR456725-1|CAG33006.1| 360|Homo sapiens JM5 protein.
Length = 360
Score = 131 bits (316), Expect = 3e-30
Identities = 75/200 (37%), Positives = 111/200 (55%), Gaps = 12/200 (6%)
Frame = +1
Query: 139 MARRKSSGITSLSFNQDQGCFTCCLKTGLRVYNVEPLVEKAHYSKEELGEVSLCEMVFRT 318
M ++ G+TSL FNQDQ CF C ++TG+R+YNVEPL+EK H E++G + L EM+ R+
Sbjct: 1 MTQQPLRGVTSLRFNQDQSCFCCAMETGVRIYNVEPLMEKGHLDHEQVGSMGLVEMLHRS 60
Query: 319 NWL-LVVKARKP----YSLLLLD------DQQRAFKAEVVFKSPIRALRARKDKVAVVLT 465
N L LV P S+L+ D D + E F P+ ++R R DK+ +VL
Sbjct: 61 NLLALVGGGSSPKFSEISVLIWDDAREGKDSKEKLVLEFTFTKPVLSVRMRHDKIVIVLK 120
Query: 466 SSVQVLALPTFQRVAL-LRTPSSARPLCAIATEPNATQILAAPAHRTGSLQLLDVSSVHR 642
+ + V + P R T + + LC + Q+L P H+ GSLQL+D++S +
Sbjct: 121 NRIYVYSFPDNPRKLFEFDTRDNPKGLCDLCPSLE-KQLLVFPGHKCGSLQLVDLAST-K 178
Query: 643 DGGSSAPSVVRCHRSALVCV 702
G SSAP + H+S + CV
Sbjct: 179 PGTSSAPFTINAHQSDIACV 198
>BC003037-1|AAH03037.1| 360|Homo sapiens WD repeat domain 45
protein.
Length = 360
Score = 131 bits (316), Expect = 3e-30
Identities = 75/200 (37%), Positives = 111/200 (55%), Gaps = 12/200 (6%)
Frame = +1
Query: 139 MARRKSSGITSLSFNQDQGCFTCCLKTGLRVYNVEPLVEKAHYSKEELGEVSLCEMVFRT 318
M ++ G+TSL FNQDQ CF C ++TG+R+YNVEPL+EK H E++G + L EM+ R+
Sbjct: 1 MTQQPLRGVTSLRFNQDQSCFCCAMETGVRIYNVEPLMEKGHLDHEQVGSMGLVEMLHRS 60
Query: 319 NWL-LVVKARKP----YSLLLLD------DQQRAFKAEVVFKSPIRALRARKDKVAVVLT 465
N L LV P S+L+ D D + E F P+ ++R R DK+ +VL
Sbjct: 61 NLLALVGGGSSPKFSEISVLIWDDAREGKDSKEKLVLEFTFTKPVLSVRMRHDKIVIVLK 120
Query: 466 SSVQVLALPTFQRVAL-LRTPSSARPLCAIATEPNATQILAAPAHRTGSLQLLDVSSVHR 642
+ + V + P R T + + LC + Q+L P H+ GSLQL+D++S +
Sbjct: 121 NRIYVYSFPDNPRKLFEFDTRDNPKGLCDLCPSLE-KQLLVFPGHKCGSLQLVDLAST-K 178
Query: 643 DGGSSAPSVVRCHRSALVCV 702
G SSAP + H+S + CV
Sbjct: 179 PGTSSAPFTINAHQSDIACV 198
>BC000464-1|AAH00464.1| 360|Homo sapiens WD repeat domain 45
protein.
Length = 360
Score = 131 bits (316), Expect = 3e-30
Identities = 75/200 (37%), Positives = 111/200 (55%), Gaps = 12/200 (6%)
Frame = +1
Query: 139 MARRKSSGITSLSFNQDQGCFTCCLKTGLRVYNVEPLVEKAHYSKEELGEVSLCEMVFRT 318
M ++ G+TSL FNQDQ CF C ++TG+R+YNVEPL+EK H E++G + L EM+ R+
Sbjct: 1 MTQQPLRGVTSLRFNQDQSCFCCAMETGVRIYNVEPLMEKGHLDHEQVGSMGLVEMLHRS 60
Query: 319 NWL-LVVKARKP----YSLLLLD------DQQRAFKAEVVFKSPIRALRARKDKVAVVLT 465
N L LV P S+L+ D D + E F P+ ++R R DK+ +VL
Sbjct: 61 NLLALVGGGSSPKFSEISVLIWDDAREGKDSKEKLVLEFTFTKPVLSVRMRHDKIVIVLK 120
Query: 466 SSVQVLALPTFQRVAL-LRTPSSARPLCAIATEPNATQILAAPAHRTGSLQLLDVSSVHR 642
+ + V + P R T + + LC + Q+L P H+ GSLQL+D++S +
Sbjct: 121 NRIYVYSFPDNPRKLFEFDTRDNPKGLCDLCPSLE-KQLLVFPGHKCGSLQLVDLAST-K 178
Query: 643 DGGSSAPSVVRCHRSALVCV 702
G SSAP + H+S + CV
Sbjct: 179 PGTSSAPFTINAHQSDIACV 198
>AY691428-1|AAV80764.1| 360|Homo sapiens WIPI-4 protein.
Length = 360
Score = 131 bits (316), Expect = 3e-30
Identities = 75/200 (37%), Positives = 111/200 (55%), Gaps = 12/200 (6%)
Frame = +1
Query: 139 MARRKSSGITSLSFNQDQGCFTCCLKTGLRVYNVEPLVEKAHYSKEELGEVSLCEMVFRT 318
M ++ G+TSL FNQDQ CF C ++TG+R+YNVEPL+EK H E++G + L EM+ R+
Sbjct: 1 MTQQPLRGVTSLRFNQDQSCFCCAMETGVRIYNVEPLMEKGHLDHEQVGSMGLVEMLHRS 60
Query: 319 NWL-LVVKARKP----YSLLLLD------DQQRAFKAEVVFKSPIRALRARKDKVAVVLT 465
N L LV P S+L+ D D + E F P+ ++R R DK+ +VL
Sbjct: 61 NLLALVGGGSSPKFSEISVLIWDDAREGKDSKEKLVLEFTFTKPVLSVRMRHDKIVIVLK 120
Query: 466 SSVQVLALPTFQRVAL-LRTPSSARPLCAIATEPNATQILAAPAHRTGSLQLLDVSSVHR 642
+ + V + P R T + + LC + Q+L P H+ GSLQL+D++S +
Sbjct: 121 NRIYVYSFPDNPRKLFEFDTRDNPKGLCDLCPSLE-KQLLVFPGHKCGSLQLVDLAST-K 178
Query: 643 DGGSSAPSVVRCHRSALVCV 702
G SSAP + H+S + CV
Sbjct: 179 PGTSSAPFTINAHQSDIACV 198
>AJ005897-1|CAA06754.1| 360|Homo sapiens JM5 protein.
Length = 360
Score = 131 bits (316), Expect = 3e-30
Identities = 75/200 (37%), Positives = 111/200 (55%), Gaps = 12/200 (6%)
Frame = +1
Query: 139 MARRKSSGITSLSFNQDQGCFTCCLKTGLRVYNVEPLVEKAHYSKEELGEVSLCEMVFRT 318
M ++ G+TSL FNQDQ CF C ++TG+R+YNVEPL+EK H E++G + L EM+ R+
Sbjct: 1 MTQQPLRGVTSLRFNQDQSCFCCAMETGVRIYNVEPLMEKGHLDHEQVGSMGLVEMLHRS 60
Query: 319 NWL-LVVKARKP----YSLLLLD------DQQRAFKAEVVFKSPIRALRARKDKVAVVLT 465
N L LV P S+L+ D D + E F P+ ++R R DK+ +VL
Sbjct: 61 NLLALVGGGSSPKFSEISVLIWDDAREGKDSKEKLVLEFTFTKPVLSVRMRHDKIVIVLK 120
Query: 466 SSVQVLALPTFQRVAL-LRTPSSARPLCAIATEPNATQILAAPAHRTGSLQLLDVSSVHR 642
+ + V + P R T + + LC + Q+L P H+ GSLQL+D++S +
Sbjct: 121 NRIYVYSFPDNPRKLFEFDTRDNPKGLCDLCPSLE-KQLLVFPGHKCGSLQLVDLAST-K 178
Query: 643 DGGSSAPSVVRCHRSALVCV 702
G SSAP + H+S + CV
Sbjct: 179 PGTSSAPFTINAHQSDIACV 198
>BC069206-1|AAH69206.1| 361|Homo sapiens WD repeat domain 45
protein.
Length = 361
Score = 130 bits (314), Expect = 5e-30
Identities = 73/201 (36%), Positives = 112/201 (55%), Gaps = 13/201 (6%)
Frame = +1
Query: 139 MARRKSSGITSLSFNQDQGCFTCCLKTGLRVYNVEPLVEKAHYSKEELGEVSLCEMVFRT 318
M ++ G+TSL FNQDQ CF C ++TG+R+YNVEPL+EK H E++G + L EM+ R+
Sbjct: 1 MTQQPLRGVTSLRFNQDQSCFCCAMETGVRIYNVEPLMEKGHLDHEQVGSMGLVEMLHRS 60
Query: 319 NWLLVV------KARKPYSLLLLD------DQQRAFKAEVVFKSPIRALRARKDKVAVVL 462
N L +V K + ++L+ D D + E F P+ ++R R DK+ +VL
Sbjct: 61 NLLALVGGGSSPKFSEISAVLIWDDAREGKDSKEKLVLEFTFTKPVLSVRMRHDKIVIVL 120
Query: 463 TSSVQVLALPTFQRVAL-LRTPSSARPLCAIATEPNATQILAAPAHRTGSLQLLDVSSVH 639
+ + V + P R T + + LC + Q+L P H+ GSLQL+D++S
Sbjct: 121 KNRIYVYSFPDNPRKLFEFDTRDNPKGLCDLCPSLE-KQLLVFPGHKCGSLQLVDLAST- 178
Query: 640 RDGGSSAPSVVRCHRSALVCV 702
+ G SSAP + H+S + CV
Sbjct: 179 KPGTSSAPFTINAHQSDIACV 199
>AM182326-1|CAJ57996.1| 344|Homo sapiens WDR45-like protein
protein.
Length = 344
Score = 100 bits (240), Expect = 4e-21
Identities = 59/190 (31%), Positives = 98/190 (51%), Gaps = 6/190 (3%)
Frame = +1
Query: 157 SGITSLSFNQDQGCFTCCLKTGLRVYNVEPLVEKAHYSKEELGEVSLCEMVFRTNWLLVV 336
+G+ FNQD GCF C ++ G RVYN +PL EK E G V EM+FR N+L +V
Sbjct: 11 NGLLYAGFNQDHGCFACGMENGFRVYNTDPLKEKEKQEFLE-GGVGHVEMLFRCNYLALV 69
Query: 337 KARK-----PYSLLLLDDQQRAFKAEVVFKSPIRALRARKDKVAVVLTSSVQVLALP-TF 498
K P +++ DD ++ E+ F + ++A++ R+D++ VVL S ++V
Sbjct: 70 GGGKKPKYPPNKVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVVVLDSMIKVFTFTHNP 129
Query: 499 QRVALLRTPSSARPLCAIATEPNATQILAAPAHRTGSLQLLDVSSVHRDGGSSAPSVVRC 678
++ + T + + LC + N +LA P TG +QL+D++S + P +
Sbjct: 130 HQLHVFETCYNPKGLCVLCPNSN-NSLLAFPGTHTGHVQLVDLASTEK-----PPVDIPA 183
Query: 679 HRSALVCVCV 708
H L C+ +
Sbjct: 184 HEGVLSCIAL 193
>BC007838-1|AAH07838.1| 286|Homo sapiens WDR45L protein protein.
Length = 286
Score = 60.1 bits (139), Expect = 8e-09
Identities = 37/141 (26%), Positives = 71/141 (50%), Gaps = 6/141 (4%)
Frame = +1
Query: 304 MVFRTNWLLVVKARK-----PYSLLLLDDQQRAFKAEVVFKSPIRALRARKDKVAVVLTS 468
M+FR N+L +V K P +++ DD ++ E+ F + ++A++ R+D++ VVL S
Sbjct: 1 MLFRCNYLALVGGGKKPKYPPNKVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVVVLDS 60
Query: 469 SVQVLALP-TFQRVALLRTPSSARPLCAIATEPNATQILAAPAHRTGSLQLLDVSSVHRD 645
++V ++ + T + + LC + N +LA P TG +QL+D++S +
Sbjct: 61 MIKVFTFTHNPHQLHVFETCYNPKGLCVLCPNSN-NSLLAFPGTHTGHVQLVDLASTEK- 118
Query: 646 GGSSAPSVVRCHRSALVCVCV 708
P + H L C+ +
Sbjct: 119 ----PPVDIPAHEGVLSCIAL 135
>BC000974-1|AAH00974.1| 150|Homo sapiens WDR45L protein protein.
Length = 150
Score = 60.1 bits (139), Expect = 8e-09
Identities = 37/141 (26%), Positives = 71/141 (50%), Gaps = 6/141 (4%)
Frame = +1
Query: 304 MVFRTNWLLVVKARK-----PYSLLLLDDQQRAFKAEVVFKSPIRALRARKDKVAVVLTS 468
M+FR N+L +V K P +++ DD ++ E+ F + ++A++ R+D++ VVL S
Sbjct: 1 MLFRCNYLALVGGGKKPKYPPNKVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVVVLDS 60
Query: 469 SVQVLALP-TFQRVALLRTPSSARPLCAIATEPNATQILAAPAHRTGSLQLLDVSSVHRD 645
++V ++ + T + + LC + N +LA P TG +QL+D++S +
Sbjct: 61 MIKVFTFTHNPHQLHVFETCYNPKGLCVLCPNSN-NSLLAFPGTHTGHVQLVDLASTEK- 118
Query: 646 GGSSAPSVVRCHRSALVCVCV 708
P + H L C+ +
Sbjct: 119 ----PPVDIPAHEGVLSCIAL 135
>AY691427-1|AAV80763.1| 286|Homo sapiens WIPI-3 protein.
Length = 286
Score = 60.1 bits (139), Expect = 8e-09
Identities = 37/141 (26%), Positives = 71/141 (50%), Gaps = 6/141 (4%)
Frame = +1
Query: 304 MVFRTNWLLVVKARK-----PYSLLLLDDQQRAFKAEVVFKSPIRALRARKDKVAVVLTS 468
M+FR N+L +V K P +++ DD ++ E+ F + ++A++ R+D++ VVL S
Sbjct: 1 MLFRCNYLALVGGGKKPKYPPNKVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVVVLDS 60
Query: 469 SVQVLALP-TFQRVALLRTPSSARPLCAIATEPNATQILAAPAHRTGSLQLLDVSSVHRD 645
++V ++ + T + + LC + N +LA P TG +QL+D++S +
Sbjct: 61 MIKVFTFTHNPHQLHVFETCYNPKGLCVLCPNSN-NSLLAFPGTHTGHVQLVDLASTEK- 118
Query: 646 GGSSAPSVVRCHRSALVCVCV 708
P + H L C+ +
Sbjct: 119 ----PPVDIPAHEGVLSCIAL 135
>AF091083-1|AAC72952.1| 286|Homo sapiens unknown protein.
Length = 286
Score = 60.1 bits (139), Expect = 8e-09
Identities = 37/141 (26%), Positives = 71/141 (50%), Gaps = 6/141 (4%)
Frame = +1
Query: 304 MVFRTNWLLVVKARK-----PYSLLLLDDQQRAFKAEVVFKSPIRALRARKDKVAVVLTS 468
M+FR N+L +V K P +++ DD ++ E+ F + ++A++ R+D++ VVL S
Sbjct: 1 MLFRCNYLALVGGGKKPKYPPNKVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVVVLDS 60
Query: 469 SVQVLALP-TFQRVALLRTPSSARPLCAIATEPNATQILAAPAHRTGSLQLLDVSSVHRD 645
++V ++ + T + + LC + N +LA P TG +QL+D++S +
Sbjct: 61 MIKVFTFTHNPHQLHVFETCYNPKGLCVLCPNSN-NSLLAFPGTHTGHVQLVDLASTEK- 118
Query: 646 GGSSAPSVVRCHRSALVCVCV 708
P + H L C+ +
Sbjct: 119 ----PPVDIPAHEGVLSCIAL 135
>CR456770-1|CAG33051.1| 286|Homo sapiens LOC56270 protein.
Length = 286
Score = 58.4 bits (135), Expect = 2e-08
Identities = 36/141 (25%), Positives = 70/141 (49%), Gaps = 6/141 (4%)
Frame = +1
Query: 304 MVFRTNWLLVVKARK-----PYSLLLLDDQQRAFKAEVVFKSPIRALRARKDKVAVVLTS 468
M+FR N+L + K P +++ DD ++ E+ F + ++A++ R+D++ VVL S
Sbjct: 1 MLFRCNYLALAGGGKKPKYPPNKVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVVVLDS 60
Query: 469 SVQVLALP-TFQRVALLRTPSSARPLCAIATEPNATQILAAPAHRTGSLQLLDVSSVHRD 645
++V ++ + T + + LC + N +LA P TG +QL+D++S +
Sbjct: 61 MIKVFTFTHNPHQLHVFETCYNPKGLCVLCPNSN-NSLLAFPGTHTGHVQLVDLASTEK- 118
Query: 646 GGSSAPSVVRCHRSALVCVCV 708
P + H L C+ +
Sbjct: 119 ----PPVDIPAHEGVLSCIAL 135
>BC009027-1|AAH09027.1| 303|Homo sapiens WDR45 protein protein.
Length = 303
Score = 58.4 bits (135), Expect = 2e-08
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 12/122 (9%)
Frame = +1
Query: 373 DQQRAFKAEVVFKSPIRALRARKDKVAVVLTSSVQVLALPTFQRVAL----LRTPSSARP 540
D + E F P+ ++R R DK+ +VL + + V + P R P +A P
Sbjct: 22 DSKEKLVLEFTFTKPVLSVRMRHDKIVIVLKNRIYVYSFPDNPRKLFEFDTRDNPKAAHP 81
Query: 541 --------LCAIATEPNATQILAAPAHRTGSLQLLDVSSVHRDGGSSAPSVVRCHRSALV 696
LC + Q+L P H+ GSLQL+D++S + G SSAP + H+S +
Sbjct: 82 TPHLHTLGLCDLCPSLEK-QLLVFPGHKCGSLQLVDLAST-KPGTSSAPFTINAHQSDIA 139
Query: 697 CV 702
CV
Sbjct: 140 CV 141
>AK131080-1|BAC85130.1| 563|Homo sapiens FLJ00279 protein protein.
Length = 563
Score = 36.7 bits (81), Expect = 0.082
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 7/79 (8%)
Frame = +2
Query: 239 WSP---WSRRRITAKRSWARCPYARWCSAPTGCSW*KLGSRTASSCW--TTSNVPSRLRW 403
W P W R R RSW C + SA +W + R+ +S W ++PS R
Sbjct: 8 WPPTTSWRRPRRGCSRSWTTCWWTWTTSARARATW-RRSRRSLTSSWRRRRPSLPSMQRS 66
Query: 404 SSS--RRYERCGPGRIRWP 454
++ RR ER P RWP
Sbjct: 67 ATGLRRRPERRRPRLCRWP 85
>AL590103-7|CAI12130.1| 93|Homo sapiens heparan sulfate
proteoglycan 2 protein.
Length = 93
Score = 34.7 bits (76), Expect = 0.33
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = -2
Query: 382 VAGRPAGGGCTASELSP---RAASWCGTPSRIGTPRPAPLC 269
+ GRP G C + P +AA+ G+P+R PRP P C
Sbjct: 17 LGGRPPGTSCCTLSVQPLRTQAATAAGSPTRWAQPRPLPSC 57
>X65018-1|CAA46152.1| 375|Homo sapiens lung surfactant protein D
protein.
Length = 375
Score = 33.5 bits (73), Expect = 0.76
Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = +3
Query: 240 GAPGREGALQQRG-AG----RGVPMRDGVPHQLAARGES-SEAVQPPPAGRPATCLQG*G 401
GAPG +G+ RG AG RGVP GVP A G + + Q P R L+G
Sbjct: 148 GAPGMQGSAGARGLAGPKGERGVPGERGVPGNAGAAGSAGAMGPQGSPGARGPPGLKGDK 207
Query: 402 GLQVADTSVAGQEG 443
G+ D G+ G
Sbjct: 208 GIP-GDKGAKGESG 220
>M60832-1|AAA62822.1| 635|Homo sapiens alpha-2 type VIII collagen
protein.
Length = 635
Score = 33.5 bits (73), Expect = 0.76
Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +3
Query: 240 GAPGREGALQQRG----AGRGVPMRDGVPHQLAARGESSEAVQPPPAGRP 377
GAPG+ GA G AG G P DG+P +GES P P G P
Sbjct: 152 GAPGQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVPGPRGEP 201
>L05485-1|AAB59450.1| 375|Homo sapiens surfactant protein D
protein.
Length = 375
Score = 33.5 bits (73), Expect = 0.76
Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = +3
Query: 240 GAPGREGALQQRG-AG----RGVPMRDGVPHQLAARGES-SEAVQPPPAGRPATCLQG*G 401
GAPG +G+ RG AG RGVP GVP A G + + Q P R L+G
Sbjct: 148 GAPGMQGSAGARGLAGPKGERGVPGERGVPGNTGAAGSAGAMGPQGSPGARGPPGLKGDK 207
Query: 402 GLQVADTSVAGQEG 443
G+ D G+ G
Sbjct: 208 GIP-GDKGAKGESG 220
>CR541948-1|CAG46746.1| 375|Homo sapiens SFTPD protein.
Length = 375
Score = 33.5 bits (73), Expect = 0.76
Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = +3
Query: 240 GAPGREGALQQRG-AG----RGVPMRDGVPHQLAARGES-SEAVQPPPAGRPATCLQG*G 401
GAPG +G+ RG AG RGVP GVP A G + + Q P R L+G
Sbjct: 148 GAPGMQGSAGARGLAGPKGERGVPGERGVPGNAGAAGSAGAMGPQGSPGARGPPGLKGDK 207
Query: 402 GLQVADTSVAGQEG 443
G+ D G+ G
Sbjct: 208 GIP-GDKGAKGESG 220
>BC099645-1|AAH99645.1| 657|Homo sapiens COL8A2 protein protein.
Length = 657
Score = 33.5 bits (73), Expect = 0.76
Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +3
Query: 240 GAPGREGALQQRG----AGRGVPMRDGVPHQLAARGESSEAVQPPPAGRP 377
GAPG+ GA G AG G P DG+P +GES P P G P
Sbjct: 171 GAPGQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVPGPRGEP 220
>BC096297-1|AAH96297.1| 657|Homo sapiens COL8A2 protein protein.
Length = 657
Score = 33.5 bits (73), Expect = 0.76
Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +3
Query: 240 GAPGREGALQQRG----AGRGVPMRDGVPHQLAARGESSEAVQPPPAGRP 377
GAPG+ GA G AG G P DG+P +GES P P G P
Sbjct: 171 GAPGQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVPGPRGEP 220
>BC063833-1|AAH63833.1| 1336|Homo sapiens collagen, type XVIII,
alpha 1 protein.
Length = 1336
Score = 33.5 bits (73), Expect = 0.76
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRP 377
G G++G+L + GA G G P ARGES A P PAG P
Sbjct: 550 GRTGQKGSLGEAGAP-GHKGSKGAPGPAGARGESGLAGAPGPAGPP 594
>BC033715-1|AAH33715.1| 816|Homo sapiens Similar to collagen, type
XVIII, alpha 1 protein.
Length = 816
Score = 33.5 bits (73), Expect = 0.76
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRP 377
G G++G+L + GA G G P ARGES A P PAG P
Sbjct: 30 GRTGQKGSLGEAGAP-GHKGSKGAPGPAGARGESGLAGAPGPAGPP 74
>BC022318-1|AAH22318.1| 375|Homo sapiens surfactant,
pulmonary-associated protein D protein.
Length = 375
Score = 33.5 bits (73), Expect = 0.76
Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = +3
Query: 240 GAPGREGALQQRG-AG----RGVPMRDGVPHQLAARGES-SEAVQPPPAGRPATCLQG*G 401
GAPG +G+ RG AG RGVP GVP A G + + Q P R L+G
Sbjct: 148 GAPGMQGSAGARGLAGPKGERGVPGERGVPGNTGAAGSAGAMGPQGSPGARGPPGLKGDK 207
Query: 402 GLQVADTSVAGQEG 443
G+ D G+ G
Sbjct: 208 GIP-GDKGAKGESG 220
>AY484971-3|AAR83297.1| 1516|Homo sapiens type XVIII collagen middle
variant protein.
Length = 1516
Score = 33.5 bits (73), Expect = 0.76
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRP 377
G G++G+L + GA G G P ARGES A P PAG P
Sbjct: 730 GRTGQKGSLGEAGAP-GHKGSKGAPGPAGARGESGLAGAPGPAGPP 774
>AY484971-2|AAR83296.1| 1751|Homo sapiens type XVIII collagen long
variant protein.
Length = 1751
Score = 33.5 bits (73), Expect = 0.76
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRP 377
G G++G+L + GA G G P ARGES A P PAG P
Sbjct: 965 GRTGQKGSLGEAGAP-GHKGSKGAPGPAGARGESGLAGAPGPAGPP 1009
>AY484971-1|AAR83298.1| 1336|Homo sapiens type XVIII collagen short
variant protein.
Length = 1336
Score = 33.5 bits (73), Expect = 0.76
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRP 377
G G++G+L + GA G G P ARGES A P PAG P
Sbjct: 550 GRTGQKGSLGEAGAP-GHKGSKGAPGPAGARGESGLAGAPGPAGPP 594
>AY216721-1|AAO22991.1| 375|Homo sapiens surfactant,
pulmonary-associated protein D protein.
Length = 375
Score = 33.5 bits (73), Expect = 0.76
Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = +3
Query: 240 GAPGREGALQQRG-AG----RGVPMRDGVPHQLAARGES-SEAVQPPPAGRPATCLQG*G 401
GAPG +G+ RG AG RGVP GVP A G + + Q P R L+G
Sbjct: 148 GAPGMQGSAGARGLAGPKGERGVPGERGVPGNAGAAGSAGAMGPQGSPGARGPPGLKGDK 207
Query: 402 GLQVADTSVAGQEG 443
G+ D G+ G
Sbjct: 208 GIP-GDKGAKGESG 220
>AL512662-3|CAI14436.1| 375|Homo sapiens surfactant,
pulmonary-associated protein D protein.
Length = 375
Score = 33.5 bits (73), Expect = 0.76
Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = +3
Query: 240 GAPGREGALQQRG-AG----RGVPMRDGVPHQLAARGES-SEAVQPPPAGRPATCLQG*G 401
GAPG +G+ RG AG RGVP GVP A G + + Q P R L+G
Sbjct: 148 GAPGMQGSAGARGLAGPKGERGVPGERGVPGNTGAAGSAGAMGPQGSPGARGPPGLKGDK 207
Query: 402 GLQVADTSVAGQEG 443
G+ D G+ G
Sbjct: 208 GIP-GDKGAKGESG 220
>AL163302-2|CAB90482.1| 1519|Homo sapiens human type XVIII collagen
protein.
Length = 1519
Score = 33.5 bits (73), Expect = 0.76
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRP 377
G G++G+L + GA G G P ARGES A P PAG P
Sbjct: 730 GRTGQKGSLGEAGAP-GHKGSKGAPGPAGARGESGLAGAPGPAGPP 774
>AL138787-1|CAI22267.1| 703|Homo sapiens collagen type VIII alpha 2
protein.
Length = 703
Score = 33.5 bits (73), Expect = 0.76
Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +3
Query: 240 GAPGREGALQQRG----AGRGVPMRDGVPHQLAARGESSEAVQPPPAGRP 377
GAPG+ GA G AG G P DG+P +GES P P G P
Sbjct: 217 GAPGQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVPGPRGEP 266
>AK074129-1|BAB84955.1| 705|Homo sapiens FLJ00201 protein protein.
Length = 705
Score = 33.5 bits (73), Expect = 0.76
Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +3
Query: 240 GAPGREGALQQRG----AGRGVPMRDGVPHQLAARGESSEAVQPPPAGRP 377
GAPG+ GA G AG G P DG+P +GES P P G P
Sbjct: 219 GAPGQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVPGPRGEP 268
>AF018082-1|AAC39659.1| 1336|Homo sapiens type XVIII collagen
protein.
Length = 1336
Score = 33.5 bits (73), Expect = 0.76
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRP 377
G G++G+L + GA G G P ARGES A P PAG P
Sbjct: 550 GRTGQKGSLGEAGAP-GHKGSKGAPGPAGARGESGLAGAPGPAGPP 594
>AF018081-1|AAC39658.1| 1516|Homo sapiens type XVIII collagen
protein.
Length = 1516
Score = 33.5 bits (73), Expect = 0.76
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRP 377
G G++G+L + GA G G P ARGES A P PAG P
Sbjct: 730 GRTGQKGSLGEAGAP-GHKGSKGAPGPAGARGESGLAGAPGPAGPP 774
>AK131104-1|BAC85154.1| 2760|Homo sapiens FLJ00341 protein protein.
Length = 2760
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = -2
Query: 379 AGRPAGGGCTASELSPRAASWCGTPSRIGTPRPAP 275
+G AGGG ++ L+P AS GTPS + PRP P
Sbjct: 1373 SGNTAGGGGSSGTLTP--ASQPGTPSPLDGPRPFP 1405
>AB011112-1|BAA25466.3| 2041|Homo sapiens KIAA0540 protein protein.
Length = 2041
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = -2
Query: 379 AGRPAGGGCTASELSPRAASWCGTPSRIGTPRPAP 275
+G AGGG ++ L+P AS GTPS + PRP P
Sbjct: 654 SGNTAGGGGSSGTLTP--ASQPGTPSPLDGPRPFP 686
>X15038-1|CAA33142.1| 447|Homo sapiens collagen-like protein
protein.
Length = 447
Score = 32.3 bits (70), Expect = 1.8
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 6/91 (6%)
Frame = +3
Query: 246 PGREGALQQRGA-GRGVPMRDGVPHQLAARGESSEAVQPPPAGRPATC----LQG*GGLQ 410
PG G + G G G+P + G + +G+ +A P G P T L G G+Q
Sbjct: 250 PGPSGEKGEPGPPGFGLPGKQGKAGERGLKGQKGDAGNPGDPGTPGTTGRPGLSGEPGVQ 309
Query: 411 VADTSVAGQEG*G-GRCPDVQRTGVGVADVP 500
G++G G CP +Q T +A P
Sbjct: 310 -GPAGPKGEKGDGCTACPSLQGTVTDMAGRP 339
>X14963-1|CAA33085.1| 447|Homo sapiens collagen-like protein (447
AA) protein.
Length = 447
Score = 32.3 bits (70), Expect = 1.8
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 6/91 (6%)
Frame = +3
Query: 246 PGREGALQQRGA-GRGVPMRDGVPHQLAARGESSEAVQPPPAGRPATC----LQG*GGLQ 410
PG G + G G G+P + G + +G+ +A P G P T L G G+Q
Sbjct: 250 PGPSGEKGEPGPPGFGLPGKQGKAGERGLKGQKGDAGNPGDPGTPGTTGRPGLSGEPGVQ 309
Query: 411 VADTSVAGQEG*G-GRCPDVQRTGVGVADVP 500
G++G G CP +Q T +A P
Sbjct: 310 -GPAGPKGEKGDGCTACPSLQGTVTDMAGRP 339
>S57132-1|AAB25797.1| 1186|Homo sapiens type XVI collagen alpha 1
chain protein.
Length = 1186
Score = 32.3 bits (70), Expect = 1.8
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 6/91 (6%)
Frame = +3
Query: 246 PGREGALQQRGA-GRGVPMRDGVPHQLAARGESSEAVQPPPAGRPATC----LQG*GGLQ 410
PG G + G G G+P + G + +G+ +A P G P T L G G+Q
Sbjct: 234 PGPSGEKGEPGPPGFGLPGKQGKAGERGLKGQKGDAGNPGDPGTPGTTGRPGLSGEPGVQ 293
Query: 411 VADTSVAGQEG*G-GRCPDVQRTGVGVADVP 500
G++G G CP +Q T +A P
Sbjct: 294 -GPAGPKGEKGDGCTACPSLQGTVTDMAGRP 323
>M92642-1|AAA58427.1| 1603|Homo sapiens alpha-1 type XVI collagen
protein.
Length = 1603
Score = 32.3 bits (70), Expect = 1.8
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 6/91 (6%)
Frame = +3
Query: 246 PGREGALQQRGA-GRGVPMRDGVPHQLAARGESSEAVQPPPAGRPATC----LQG*GGLQ 410
PG G + G G G+P + G + +G+ +A P G P T L G G+Q
Sbjct: 651 PGPSGEKGEPGPPGFGLPGKQGKAGERGLKGQKGDAGNPGDPGTPGTTGRPGLSGEPGVQ 710
Query: 411 VADTSVAGQEG*G-GRCPDVQRTGVGVADVP 500
G++G G CP +Q T +A P
Sbjct: 711 -GPAGPKGEKGDGCTACPSLQGTVTDMAGRP 740
>L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein.
Length = 2912
Score = 32.3 bits (70), Expect = 1.8
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = +3
Query: 240 GAPGREGALQQRG--AGRGVPMRDGVPHQLAARGESSEAVQPPPAGRPATCLQG*GGLQV 413
GAPGR+GA + G GVP G+P + +GE P P G P + G G +
Sbjct: 2225 GAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKGE------PGPTGAPGQAVVGLPGAKG 2278
Query: 414 ADTSVAGQEG 443
+ G G
Sbjct: 2279 EKGAPGGLAG 2288
Score = 31.5 bits (68), Expect = 3.1
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +3
Query: 240 GAPGREGALQQRG--AGRGVPMRDGVPHQLAARGESSEAVQPPPAGRPATCLQG*GGLQV 413
GAPG G + ++G G R+G P +G+ E P P GR G G +
Sbjct: 1661 GAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVD--TGPGAREK 1718
Query: 414 ADTSVAGQEG 443
+ GQEG
Sbjct: 1719 GEPGDRGQEG 1728
>L12397-1|AAL58637.1| 350|Homo sapiens Dopamine D4 receptor
protein.
Length = 350
Score = 32.3 bits (70), Expect = 1.8
Identities = 24/74 (32%), Positives = 29/74 (39%), Gaps = 5/74 (6%)
Frame = -2
Query: 451 PPYPSWPATLVSAT*RPPQP*RHVAGRPAGGGCTASELSP-----RAASWCGTPSRIGTP 287
PP P P PP P + P G C + P R +SWC + R P
Sbjct: 248 PPAPRLPQDPCGPDCAPPAP--GLPRGPCGPDCAPAAPGPSCCAGRPSSWCTSRRRCVLP 305
Query: 286 RPAPLCCNAPSRPG 245
P P +APS PG
Sbjct: 306 APCPRGWSAPS-PG 318
>L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen
protein.
Length = 2944
Score = 32.3 bits (70), Expect = 1.8
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = +3
Query: 240 GAPGREGALQQRG--AGRGVPMRDGVPHQLAARGESSEAVQPPPAGRPATCLQG*GGLQV 413
GAPGR+GA + G GVP G+P + +GE P P G P + G G +
Sbjct: 2257 GAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKGE------PGPTGAPGQAVVGLPGAKG 2310
Query: 414 ADTSVAGQEG 443
+ G G
Sbjct: 2311 EKGAPGGLAG 2320
Score = 31.5 bits (68), Expect = 3.1
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +3
Query: 240 GAPGREGALQQRG--AGRGVPMRDGVPHQLAARGESSEAVQPPPAGRPATCLQG*GGLQV 413
GAPG G + ++G G R+G P +G+ E P P GR G G +
Sbjct: 1661 GAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVD--TGPGAREK 1718
Query: 414 ADTSVAGQEG 443
+ GQEG
Sbjct: 1719 GEPGDRGQEG 1728
>BC126479-1|AAI26480.1| 200|Homo sapiens chromosome 4 open reading
frame 38 protein.
Length = 200
Score = 32.3 bits (70), Expect = 1.8
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 352 TASELSPRAASWCGTPSR-IGTPRPAPLCCNAPSRPGAP 239
T++E + RAA GTP R P AP APSRPGAP
Sbjct: 2 TSAETASRAAESGGTPVRPCSRPHRAPSPA-APSRPGAP 39
>BC126477-1|AAI26478.1| 200|Homo sapiens chromosome 4 open reading
frame 38 protein.
Length = 200
Score = 32.3 bits (70), Expect = 1.8
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 352 TASELSPRAASWCGTPSR-IGTPRPAPLCCNAPSRPGAP 239
T++E + RAA GTP R P AP APSRPGAP
Sbjct: 2 TSAETASRAAESGGTPVRPCSRPHRAPSPA-APSRPGAP 39
>BC117170-1|AAI17171.1| 1714|Homo sapiens collagen, type XXIV, alpha 1
protein.
Length = 1714
Score = 32.3 bits (70), Expect = 1.8
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRPA-TCLQG*GGLQVA 416
GAPG EG LQ + +GVP G+P + +GE P GR T L G G+
Sbjct: 1050 GAPGEEG-LQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPEGI--- 1105
Query: 417 DTSVAGQEG*GGRCPDVQRTG 479
+ GQ G G+ D + G
Sbjct: 1106 -VGIPGQRGRPGKKGDKGQIG 1125
>BC113654-1|AAI13655.1| 1714|Homo sapiens collagen, type XXIV, alpha 1
protein.
Length = 1714
Score = 32.3 bits (70), Expect = 1.8
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRPA-TCLQG*GGLQVA 416
GAPG EG LQ + +GVP G+P + +GE P GR T L G G+
Sbjct: 1050 GAPGEEG-LQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPEGI--- 1105
Query: 417 DTSVAGQEG*GGRCPDVQRTG 479
+ GQ G G+ D + G
Sbjct: 1106 -VGIPGQRGRPGKKGDKGQIG 1125
>BC016004-1|AAH16004.1| 520|Homo sapiens macrophage receptor with
collagenous structure protein.
Length = 520
Score = 32.3 bits (70), Expect = 1.8
Identities = 26/71 (36%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRPAT-CLQG*GGLQ-- 410
G PG +G Q G +GVP G A+GE A P AG P + G GL+
Sbjct: 292 GFPGAKGDQGQPGL-QGVPGPPGAVGHPGAKGEPGSAGSPGRAGLPGSPGSPGATGLKGS 350
Query: 411 VADTSVAGQEG 443
DT + GQ+G
Sbjct: 351 KGDTGLQGQQG 361
>AY244357-1|AAP80185.1| 1714|Homo sapiens alpha 1 type XXIV collagen
precursor protein.
Length = 1714
Score = 32.3 bits (70), Expect = 1.8
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRPA-TCLQG*GGLQVA 416
GAPG EG LQ + +GVP G+P + +GE P GR T L G G+
Sbjct: 1050 GAPGEEG-LQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPEGI--- 1105
Query: 417 DTSVAGQEG*GGRCPDVQRTG 479
+ GQ G G+ D + G
Sbjct: 1106 -VGIPGQRGRPGKKGDKGQIG 1125
>AL445427-1|CAI19120.1| 1714|Homo sapiens collagen, type XXIV, alpha 1
protein.
Length = 1714
Score = 32.3 bits (70), Expect = 1.8
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRPA-TCLQG*GGLQVA 416
GAPG EG LQ + +GVP G+P + +GE P GR T L G G+
Sbjct: 1050 GAPGEEG-LQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPEGI--- 1105
Query: 417 DTSVAGQEG*GGRCPDVQRTG 479
+ GQ G G+ D + G
Sbjct: 1106 -VGIPGQRGRPGKKGDKGQIG 1125
>AL359971-1|CAI16233.1| 1714|Homo sapiens collagen, type XXIV, alpha 1
protein.
Length = 1714
Score = 32.3 bits (70), Expect = 1.8
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRPA-TCLQG*GGLQVA 416
GAPG EG LQ + +GVP G+P + +GE P GR T L G G+
Sbjct: 1050 GAPGEEG-LQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPEGI--- 1105
Query: 417 DTSVAGQEG*GGRCPDVQRTG 479
+ GQ G G+ D + G
Sbjct: 1106 -VGIPGQRGRPGKKGDKGQIG 1125
>AL356059-1|CAH71121.1| 1714|Homo sapiens collagen, type XXIV, alpha 1
protein.
Length = 1714
Score = 32.3 bits (70), Expect = 1.8
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRPA-TCLQG*GGLQVA 416
GAPG EG LQ + +GVP G+P + +GE P GR T L G G+
Sbjct: 1050 GAPGEEG-LQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPEGI--- 1105
Query: 417 DTSVAGQEG*GGRCPDVQRTG 479
+ GQ G G+ D + G
Sbjct: 1106 -VGIPGQRGRPGKKGDKGQIG 1125
>AK054839-1|BAB70812.1| 200|Homo sapiens protein ( Homo sapiens
cDNA FLJ30277 fis, clone BRACE2002752. ).
Length = 200
Score = 32.3 bits (70), Expect = 1.8
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 352 TASELSPRAASWCGTPSR-IGTPRPAPLCCNAPSRPGAP 239
T++E + RAA GTP R P AP APSRPGAP
Sbjct: 2 TSAETASRAAESGGTPVRPCSRPHRAPSPA-APSRPGAP 39
>AF128186-1|AAD41064.1| 520|Homo sapiens macrophage receptor
protein.
Length = 520
Score = 32.3 bits (70), Expect = 1.8
Identities = 26/71 (36%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRPAT-CLQG*GGLQ-- 410
G PG +G Q G +GVP G A+GE A P AG P + G GL+
Sbjct: 292 GFPGAKGDQGQPGL-QGVPGPPGAVGHPGAKGEPGSAGSPGRAGLPGSPGSPGATGLKGS 350
Query: 411 VADTSVAGQEG 443
DT + GQ+G
Sbjct: 351 KGDTGLQGQQG 361
>AF035819-1|AAC08800.1| 520|Homo sapiens macrophage receptor MARCO
protein.
Length = 520
Score = 32.3 bits (70), Expect = 1.8
Identities = 26/71 (36%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRPAT-CLQG*GGLQ-- 410
G PG +G Q G +GVP G A+GE A P AG P + G GL+
Sbjct: 292 GFPGAKGDQGQPGL-QGVPGPPGAVGHPGAKGEPGSAGSPGRAGLPGSPGSPGATGLKGS 350
Query: 411 VADTSVAGQEG 443
DT + GQ+G
Sbjct: 351 KGDTGLQGQQG 361
>AC013457-1|AAX88875.1| 520|Homo sapiens unknown protein.
Length = 520
Score = 32.3 bits (70), Expect = 1.8
Identities = 26/71 (36%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRPAT-CLQG*GGLQ-- 410
G PG +G Q G +GVP G A+GE A P AG P + G GL+
Sbjct: 292 GFPGAKGDQGQPGL-QGVPGPPGAVGHPGAKGEPGSAGSPGRAGLPGSPGSPGATGLKGS 350
Query: 411 VADTSVAGQEG 443
DT + GQ+G
Sbjct: 351 KGDTGLQGQQG 361
>AB209686-1|BAD92923.1| 867|Homo sapiens collagen, type XXIV, alpha
1 variant protein.
Length = 867
Score = 32.3 bits (70), Expect = 1.8
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRPA-TCLQG*GGLQVA 416
GAPG EG LQ + +GVP G+P + +GE P GR T L G G+
Sbjct: 224 GAPGEEG-LQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPEGI--- 279
Query: 417 DTSVAGQEG*GGRCPDVQRTG 479
+ GQ G G+ D + G
Sbjct: 280 -VGIPGQRGRPGKKGDKGQIG 299
>AB209645-1|BAD92882.1| 1027|Homo sapiens alpha 1 type VII collagen
precursor variant protein.
Length = 1027
Score = 32.3 bits (70), Expect = 1.8
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = +3
Query: 240 GAPGREGALQQRG--AGRGVPMRDGVPHQLAARGESSEAVQPPPAGRPATCLQG*GGLQV 413
GAPGR+GA + G GVP G+P + +GE P P G P + G G +
Sbjct: 896 GAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKGE------PGPTGAPGQAVVGLPGAKG 949
Query: 414 ADTSVAGQEG 443
+ G G
Sbjct: 950 EKGAPGGLAG 959
Score = 31.5 bits (68), Expect = 3.1
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +3
Query: 240 GAPGREGALQQRG--AGRGVPMRDGVPHQLAARGESSEAVQPPPAGRPATCLQG*GGLQV 413
GAPG G + ++G G R+G P +G+ E P P GR G G +
Sbjct: 300 GAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVD--TGPGAREK 357
Query: 414 ADTSVAGQEG 443
+ GQEG
Sbjct: 358 GEPGDRGQEG 367
>AB209571-1|BAD92808.1| 1463|Homo sapiens alpha 1 type XVI collagen
precursor variant protein.
Length = 1463
Score = 32.3 bits (70), Expect = 1.8
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 6/91 (6%)
Frame = +3
Query: 246 PGREGALQQRGA-GRGVPMRDGVPHQLAARGESSEAVQPPPAGRPATC----LQG*GGLQ 410
PG G + G G G+P + G + +G+ +A P G P T L G G+Q
Sbjct: 542 PGPSGEKGEPGPPGFGLPGKQGKAGERGLKGQKGDAGNPGDPGTPGTTGRPGLSGEPGVQ 601
Query: 411 VADTSVAGQEG*G-GRCPDVQRTGVGVADVP 500
G++G G CP +Q T +A P
Sbjct: 602 -GPAGPKGEKGDGCTACPSLQGTVTDMAGRP 631
>Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen
protein.
Length = 1464
Score = 31.9 bits (69), Expect = 2.3
Identities = 20/46 (43%), Positives = 21/46 (45%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRP 377
G GREGA A G P RDG P RGE+ A P G P
Sbjct: 1010 GESGREGA----PAAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAP 1051
>D79995-1|BAA11490.2| 1203|Homo sapiens KIAA0173 protein.
Length = 1203
Score = 31.9 bits (69), Expect = 2.3
Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 6/80 (7%)
Frame = -1
Query: 707 THTHTSAERW-QRTTLGALEPPSRCTLDTSSNCRDP---VRCAGAASICVALGSVAMAHS 540
T T + A W R L P C LD SS+ +DP +R A A G M
Sbjct: 299 TSTTSVASSWYNRNNLAMRAEPLSCALDDSSDSQDPTKEIRFTEAVRKLTARGFEKMPRQ 358
Query: 539 G--LAEDGVRSNATRWNVGN 486
G L + + + +WNV N
Sbjct: 359 GCQLEQSSFLNPSFQWNVLN 378
>BC021707-1|AAH21707.1| 1199|Homo sapiens tubulin tyrosine
ligase-like family, member 4 protein.
Length = 1199
Score = 31.9 bits (69), Expect = 2.3
Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 6/80 (7%)
Frame = -1
Query: 707 THTHTSAERW-QRTTLGALEPPSRCTLDTSSNCRDP---VRCAGAASICVALGSVAMAHS 540
T T + A W R L P C LD SS+ +DP +R A A G M
Sbjct: 295 TSTTSVASSWYNRNNLAMRAEPLSCALDDSSDSQDPTKEIRFTEAVRKLTARGFEKMPRQ 354
Query: 539 G--LAEDGVRSNATRWNVGN 486
G L + + + +WNV N
Sbjct: 355 GCQLEQSSFLNPSFQWNVLN 374
>Y14690-1|CAA75002.1| 1496|Homo sapiens procollagen alpha 2(V)
protein.
Length = 1496
Score = 31.5 bits (68), Expect = 3.1
Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRPATCLQG*GGL--QV 413
G PG G + + G G DG P + A GE + P PAG P + QG G V
Sbjct: 1032 GPPGSNGPVGEPGP-EGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGS--QGAPGTPGPV 1088
Query: 414 ADTSVAGQEG 443
AGQ G
Sbjct: 1089 GAPGDAGQRG 1098
>X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1
protein.
Length = 1069
Score = 31.5 bits (68), Expect = 3.1
Identities = 19/46 (41%), Positives = 20/46 (43%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRP 377
G PG G GA G P RDG P RGE+ A P G P
Sbjct: 1007 GPPGESGREGAPGA-EGSPGRDGSPGAKGDRGETGPAGPPGAPGAP 1051
>X15332-1|CAA33387.1| 1078|Homo sapiens alpha-1 (III) collagen
protein.
Length = 1078
Score = 31.5 bits (68), Expect = 3.1
Identities = 22/71 (30%), Positives = 28/71 (39%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRPATCLQG*GGLQVAD 419
G PG G +G G G P G+ + GE E P PAG P Q +
Sbjct: 621 GPPGPAGQPGDKGEG-GAPGLPGIAGPRGSPGERGETGPPGPAGFPGAPGQNGEPGGKGE 679
Query: 420 TSVAGQEG*GG 452
G++G GG
Sbjct: 680 RGAPGEKGEGG 690
Score = 30.7 bits (66), Expect = 5.4
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Frame = +3
Query: 240 GAPGREGALQQRGA----GR-GVPMRDGVPHQLAARGESSEAVQPPPAGRPATCLQG*GG 404
G PG G L G G G P DGVP + RG + P PAG+P +G GG
Sbjct: 579 GMPGERGGLGSPGPKGDKGEPGGPGADGVPGKDGPRGPTGPIGPPGPAGQPGD--KGEGG 636
>X14420-1|CAA32583.1| 1466|Homo sapiens prepro-alpha-1 type 3
collagen protein.
Length = 1466
Score = 31.5 bits (68), Expect = 3.1
Identities = 22/71 (30%), Positives = 28/71 (39%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRPATCLQG*GGLQVAD 419
G PG G +G G G P G+ + GE E P PAG P Q +
Sbjct: 768 GPPGPAGQPGDKGEG-GAPGLPGIAGPRGSPGERGETGPPGPAGFPGAPGQNGEPGGKGE 826
Query: 420 TSVAGQEG*GG 452
G++G GG
Sbjct: 827 RGAPGEKGEGG 837
Score = 30.7 bits (66), Expect = 5.4
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Frame = +3
Query: 240 GAPGREGALQQRGA----GR-GVPMRDGVPHQLAARGESSEAVQPPPAGRPATCLQG*GG 404
G PG G L G G G P DGVP + RG + P PAG+P +G GG
Sbjct: 726 GMPGERGGLGSPGPKGDKGEPGGPGADGVPGKDGPRGPTGPIGPPGPAGQPGD--KGEGG 783
>X04758-1|CAA28454.1| 1099|Homo sapiens protein ( Human mRNA for
pro-alpha 2 (V) collagen chain. ).
Length = 1099
Score = 31.5 bits (68), Expect = 3.1
Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRPATCLQG*GGL--QV 413
G PG G + + G G DG P + A GE + P PAG P + QG G V
Sbjct: 635 GPPGSNGPVGEPGP-EGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGS--QGAPGTPGPV 691
Query: 414 ADTSVAGQEG 443
AGQ G
Sbjct: 692 GAPGDAGQRG 701
>M10956-1|AAA52007.1| 225|Homo sapiens COL5A2 protein.
Length = 225
Score = 31.5 bits (68), Expect = 3.1
Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRPATCLQG*GGL--QV 413
G PG G + + G G DG P + A GE + P PAG P + QG G V
Sbjct: 31 GPPGSNGPVGEPGP-EGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGS--QGAPGTPGPV 87
Query: 414 ADTSVAGQEG 443
AGQ G
Sbjct: 88 GAPGDAGQRG 97
>BC086874-1|AAH86874.1| 1139|Homo sapiens COL5A2 protein protein.
Length = 1139
Score = 31.5 bits (68), Expect = 3.1
Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRPATCLQG*GGL--QV 413
G PG G + + G G DG P + A GE + P PAG P + QG G V
Sbjct: 675 GPPGSNGPVGEPGP-EGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGS--QGAPGTPGPV 731
Query: 414 ADTSVAGQEG 443
AGQ G
Sbjct: 732 GAPGDAGQRG 741
>BC053850-1|AAH53850.1| 403|Homo sapiens forkhead box Q1 protein.
Length = 403
Score = 31.5 bits (68), Expect = 3.1
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = -2
Query: 475 VRWTSGQRPPYPSWPATLVSAT*RPPQP-*RHVAGRPAGGGCTASELSPRAASWCGTPSR 299
++W + PP P++PA L +A R P + AG PA G +E+ P A P
Sbjct: 295 LQWGAAPCPPLPAFPALLPAAPCRALLPLCAYGAGEPARLGAREAEVPPTAPPLLLAPLP 354
Query: 298 IGTPRPAPLCCNAPSRPGAPHY 233
P PL P+ GA Y
Sbjct: 355 AAAP-AKPL--RGPAAGGAHLY 373
>BC047569-1|AAH47569.1| 253|Homo sapiens membrane-associated ring
finger (C3HC4) 3 protein.
Length = 253
Score = 31.5 bits (68), Expect = 3.1
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +1
Query: 487 LPTFQRVALLRTPSSARPLCAIATEPNATQILAAPAHRTGSLQLLDVSSVHRDGGSSAPS 666
L T R ++P + RP+C I E ++ + L +P TG+L + S + SS S
Sbjct: 52 LSTVVRTLATQSPFNDRPMCRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTS 111
Query: 667 VVR-CH 681
CH
Sbjct: 112 YCELCH 117
>BC043613-1|AAH43613.1| 503|Homo sapiens COL5A2 protein protein.
Length = 503
Score = 31.5 bits (68), Expect = 3.1
Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRPATCLQG*GGL--QV 413
G PG G + + G G DG P + A GE + P PAG P + QG G V
Sbjct: 39 GPPGSNGPVGEPGP-EGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGS--QGAPGTPGPV 95
Query: 414 ADTSVAGQEG 443
AGQ G
Sbjct: 96 GAPGDAGQRG 105
>BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha 1
protein.
Length = 1464
Score = 31.5 bits (68), Expect = 3.1
Identities = 19/46 (41%), Positives = 20/46 (43%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRP 377
G PG G GA G P RDG P RGE+ A P G P
Sbjct: 1007 GPPGESGREGAPGA-EGSPGRDGSPGAKGDRGETGPAGPPGAPGAP 1051
>BC028178-1|AAH28178.1| 1163|Homo sapiens COL3A1 protein protein.
Length = 1163
Score = 31.5 bits (68), Expect = 3.1
Identities = 22/71 (30%), Positives = 28/71 (39%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRPATCLQG*GGLQVAD 419
G PG G +G G G P G+ + GE E P PAG P Q +
Sbjct: 768 GPPGPAGQPGDKGEG-GAPGLPGIAGPRGSPGERGETGPPGPAGFPGAPGQNGEPGGKGE 826
Query: 420 TSVAGQEG*GG 452
G++G GG
Sbjct: 827 RGAPGEKGEGG 837
Score = 30.7 bits (66), Expect = 5.4
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Frame = +3
Query: 240 GAPGREGALQQRGA----GR-GVPMRDGVPHQLAARGESSEAVQPPPAGRPATCLQG*GG 404
G PG G L G G G P DGVP + RG + P PAG+P +G GG
Sbjct: 726 GMPGERGGLGSPGPKGDKGEPGGPGADGVPGKDGPRGPTGPIGPPGPAGQPGD--KGEGG 783
>AY016295-2|AAL13167.1| 1466|Homo sapiens type III preprocollagen
alpha 1 chain protein.
Length = 1466
Score = 31.5 bits (68), Expect = 3.1
Identities = 22/71 (30%), Positives = 28/71 (39%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRPATCLQG*GGLQVAD 419
G PG G +G G G P G+ + GE E P PAG P Q +
Sbjct: 768 GPPGPAGQPGDKGEG-GAPGLPGIAGPRGSPGERGETGPPGPAGFPGAPGQNGEPGGKGE 826
Query: 420 TSVAGQEG*GG 452
G++G GG
Sbjct: 827 RGAPGEKGEGG 837
Score = 30.7 bits (66), Expect = 5.4
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Frame = +3
Query: 240 GAPGREGALQQRGA----GR-GVPMRDGVPHQLAARGESSEAVQPPPAGRPATCLQG*GG 404
G PG G L G G G P DGVP + RG + P PAG+P +G GG
Sbjct: 726 GMPGERGGLGSPGPKGDKGEPGGPGADGVPGKDGPRGPTGPIGPPGPAGQPGD--KGEGG 783
>AY016295-1|AAL13166.1| 1347|Homo sapiens type V preprocollagen alpha
2 chain protein.
Length = 1347
Score = 31.5 bits (68), Expect = 3.1
Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRPATCLQG*GGL--QV 413
G PG G + + G G DG P + A GE + P PAG P + QG G V
Sbjct: 883 GPPGSNGPVGEPGP-EGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGS--QGAPGTPGPV 939
Query: 414 ADTSVAGQEG 443
AGQ G
Sbjct: 940 GAPGDAGQRG 949
>AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha 1
protein.
Length = 1806
Score = 31.5 bits (68), Expect = 3.1
Identities = 19/45 (42%), Positives = 20/45 (44%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGR 374
G PG G Q G G G DG P Q G S EA P P G+
Sbjct: 1318 GPPGEPGPAGQDGVG-GDKGEDGDPGQPGPPGPSGEAGPPGPPGK 1361
>AL499606-1|CAH70503.1| 403|Homo sapiens forkhead box Q1 protein.
Length = 403
Score = 31.5 bits (68), Expect = 3.1
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = -2
Query: 475 VRWTSGQRPPYPSWPATLVSAT*RPPQP-*RHVAGRPAGGGCTASELSPRAASWCGTPSR 299
++W + PP P++PA L +A R P + AG PA G +E+ P A P
Sbjct: 295 LQWGAAPCPPLPAFPALLPAAPCRALLPLCAYGAGEPARLGAREAEVPPTAPPLLLAPLP 354
Query: 298 IGTPRPAPLCCNAPSRPGAPHY 233
P PL P+ GA Y
Sbjct: 355 AAAP-AKPL--RGPAAGGAHLY 373
>AL135842-3|CAI23350.1| 118|Homo sapiens late cornified envelope 5A
protein.
Length = 118
Score = 31.5 bits (68), Expect = 3.1
Identities = 21/66 (31%), Positives = 26/66 (39%)
Frame = -2
Query: 334 PRAASWCGTPSRIGTPRPAPLCCNAPSRPGAPHYRHAGQSSDSM*NSLGPD*NSSSLCHC 155
P +S CG+ S CC + RP R QSS + G SS CH
Sbjct: 46 PPVSSCCGSSSGGCCSSEGGGCCLSHHRP-RQSLRRRPQSSSCCGSGSGQQSGGSSCCHS 104
Query: 154 SSGAPC 137
S G+ C
Sbjct: 105 SGGSGC 110
>AF225950-1|AAK00639.1| 403|Homo sapiens HNF-3/forkhead-like
protein 1 protein.
Length = 403
Score = 31.5 bits (68), Expect = 3.1
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = -2
Query: 475 VRWTSGQRPPYPSWPATLVSAT*RPPQP-*RHVAGRPAGGGCTASELSPRAASWCGTPSR 299
++W + PP P++PA L +A R P + AG PA G +E+ P A P
Sbjct: 295 LQWGAAPCPPLPAFPALLPAAPCRALLPLCAYGAGEPARLGAREAEVPPTAPPLLLAPLP 354
Query: 298 IGTPRPAPLCCNAPSRPGAPHY 233
P PL P+ GA Y
Sbjct: 355 AAAP-AKPL--RGPAAGGAHLY 373
>AF153341-1|AAF75586.1| 402|Homo sapiens winged helix/forkhead
transcription factor protein.
Length = 402
Score = 31.5 bits (68), Expect = 3.1
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = -2
Query: 475 VRWTSGQRPPYPSWPATLVSAT*RPPQP-*RHVAGRPAGGGCTASELSPRAASWCGTPSR 299
++W + PP P++PA L +A R P + AG PA G +E+ P A P
Sbjct: 294 LQWGAAPCPPLPAFPALLPAAPCRALLPLCAYGAGEPARLGAREAEVPPTAPPLLLAPLP 353
Query: 298 IGTPRPAPLCCNAPSRPGAPHY 233
P PL P+ GA Y
Sbjct: 354 AAAP-AKPL--RGPAAGGAHLY 372
>AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen
protein.
Length = 1461
Score = 31.5 bits (68), Expect = 3.1
Identities = 19/46 (41%), Positives = 20/46 (43%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRP 377
G PG G GA G P RDG P RGE+ A P G P
Sbjct: 1004 GPPGESGREGAPGA-EGSPGRDGSPGAKGDRGETGPAGPPGAPGAP 1048
>AC133106-1|AAY24185.1| 503|Homo sapiens unknown protein.
Length = 503
Score = 31.5 bits (68), Expect = 3.1
Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRPATCLQG*GGL--QV 413
G PG G + + G G DG P + A GE + P PAG P + QG G V
Sbjct: 39 GPPGSNGPVGEPGP-EGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGS--QGAPGTPGPV 95
Query: 414 ADTSVAGQEG 443
AGQ G
Sbjct: 96 GAPGDAGQRG 105
>AC066694-1|AAY24164.1| 1466|Homo sapiens unknown protein.
Length = 1466
Score = 31.5 bits (68), Expect = 3.1
Identities = 22/71 (30%), Positives = 28/71 (39%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRPATCLQG*GGLQVAD 419
G PG G +G G G P G+ + GE E P PAG P Q +
Sbjct: 768 GPPGPAGQPGDKGEG-GAPGLPGIAGPRGSPGERGETGPPGPAGFPGAPGQNGEPGGKGE 826
Query: 420 TSVAGQEG*GG 452
G++G GG
Sbjct: 827 RGAPGEKGEGG 837
Score = 30.7 bits (66), Expect = 5.4
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Frame = +3
Query: 240 GAPGREGALQQRGA----GR-GVPMRDGVPHQLAARGESSEAVQPPPAGRPATCLQG*GG 404
G PG G L G G G P DGVP + RG + P PAG+P +G GG
Sbjct: 726 GMPGERGGLGSPGPKGDKGEPGGPGADGVPGKDGPRGPTGPIGPPGPAGQPGD--KGEGG 783
>AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain
precursor variant protein.
Length = 1467
Score = 31.5 bits (68), Expect = 3.1
Identities = 19/46 (41%), Positives = 20/46 (43%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRP 377
G PG G GA G P RDG P RGE+ A P G P
Sbjct: 1010 GPPGESGREGAPGA-EGSPGRDGSPGAKGDRGETGPAGPPGAPGAP 1054
>AB209045-1|BAD92282.1| 1502|Homo sapiens alpha 2 type V collagen
preproprotein variant protein.
Length = 1502
Score = 31.5 bits (68), Expect = 3.1
Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRPATCLQG*GGL--QV 413
G PG G + + G G DG P + A GE + P PAG P + QG G V
Sbjct: 1038 GPPGSNGPVGEPGP-EGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGS--QGAPGTPGPV 1094
Query: 414 ADTSVAGQEG 443
AGQ G
Sbjct: 1095 GAPGDAGQRG 1104
>X16711-1|CAA34683.1| 1160|Homo sapiens COL2A1 protein.
Length = 1160
Score = 31.1 bits (67), Expect = 4.1
Identities = 37/95 (38%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
Frame = +3
Query: 240 GAPGREGALQQRG-AG-RGVPMRDGVPHQLAARGESSEAVQPPPAGRPATCLQG*GGL-- 407
GAPG G G AG G P DG P A+GE EA Q AG P QG G
Sbjct: 750 GAPGERGETGPPGPAGFAGPPGADGQP---GAKGEQGEAGQKGDAGAPGP--QGPSGAPG 804
Query: 408 QVADTSVAGQEG*GGRCPDVQRTGVGVADVPAGRV 512
T V G +G G TG A AGRV
Sbjct: 805 PQGPTGVTGPKGARGAQGPPGATGFPGA---AGRV 836
Score = 30.7 bits (66), Expect = 5.4
Identities = 19/44 (43%), Positives = 21/44 (47%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAG 371
G G EGA + G GRG+ G P A GE E P PAG
Sbjct: 702 GEKGPEGAPGKDG-GRGLTGPIGPPGPAGANGEKGEVGPPGPAG 744
>X16468-1|CAA34488.1| 1418|Homo sapiens protein ( Human mRNA for
alpha-1 type II collagen. ).
Length = 1418
Score = 31.1 bits (67), Expect = 4.1
Identities = 33/93 (35%), Positives = 36/93 (38%), Gaps = 2/93 (2%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRPATCLQG*GGL--QV 413
GAPG G G G+ G Q A+GE EA Q AG P QG G
Sbjct: 750 GAPGERGETGPPGTS-GIAGPPGADGQPGAKGEQGEAGQKGDAGAPGP--QGPSGAPGPQ 806
Query: 414 ADTSVAGQEG*GGRCPDVQRTGVGVADVPAGRV 512
T V G +G G TG A AGRV
Sbjct: 807 GPTGVTGPKGARGAQGPPGATGFPGA---AGRV 836
Score = 30.7 bits (66), Expect = 5.4
Identities = 19/44 (43%), Positives = 21/44 (47%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAG 371
G G EGA + G GRG+ G P A GE E P PAG
Sbjct: 702 GEKGPEGAPGKDG-GRGLTGPIGPPGPAGANGEKGEVGPPGPAG 744
>X13783-1|CAA32030.1| 714|Homo sapiens alpha-1 type 2 collagen (714
AA) protein.
Length = 714
Score = 31.1 bits (67), Expect = 4.1
Identities = 37/95 (38%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
Frame = +3
Query: 240 GAPGREGALQQRG-AG-RGVPMRDGVPHQLAARGESSEAVQPPPAGRPATCLQG*GGL-- 407
GAPG G G AG G P DG P A+GE EA Q AG P QG G
Sbjct: 319 GAPGERGETGPPGPAGFAGPPGADGQP---GAKGEQGEAGQKGDAGAPGP--QGPSGAPG 373
Query: 408 QVADTSVAGQEG*GGRCPDVQRTGVGVADVPAGRV 512
T V G +G G TG A AGRV
Sbjct: 374 PQGPTGVTGPKGARGAQGPPGATGFPGA---AGRV 405
Score = 29.9 bits (64), Expect = 9.4
Identities = 19/44 (43%), Positives = 21/44 (47%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAG 371
G G EGA + GA RG+ G P A GE E P PAG
Sbjct: 271 GEKGPEGAPGKDGA-RGLTGPIGPPGPAGANGEKGEVGPPGPAG 313
>U07802-1|AAA91778.1| 482|Homo sapiens Tis11d protein.
Length = 482
Score = 31.1 bits (67), Expect = 4.1
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = -2
Query: 370 PAGGGCTASELSPRAASWCGTPSRIGTPRPAPLCCNAPSRPGAPHYRHAG 221
P C+++ +AS C + S TP AP CC + + A Y G
Sbjct: 288 PPPPSCSSASSCSSSASSCSSASAASTPSGAPTCCASAAAAAALLYGTGG 337
>L10347-1|AAC41772.1| 1487|Homo sapiens alpha-1 type II collagen
protein.
Length = 1487
Score = 31.1 bits (67), Expect = 4.1
Identities = 37/95 (38%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
Frame = +3
Query: 240 GAPGREGALQQRG-AG-RGVPMRDGVPHQLAARGESSEAVQPPPAGRPATCLQG*GGL-- 407
GAPG G G AG G P DG P A+GE EA Q AG P QG G
Sbjct: 819 GAPGERGETGPPGPAGFAGPPGADGQP---GAKGEQGEAGQKGDAGAPGP--QGPSGAPG 873
Query: 408 QVADTSVAGQEG*GGRCPDVQRTGVGVADVPAGRV 512
T V G +G G TG A AGRV
Sbjct: 874 PQGPTGVTGPKGARGAQGPPGATGFPGA---AGRV 905
Score = 30.7 bits (66), Expect = 5.4
Identities = 19/44 (43%), Positives = 21/44 (47%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAG 371
G G EGA + G GRG+ G P A GE E P PAG
Sbjct: 771 GEKGPEGAPGKDG-GRGLTGPIGPPGPAGANGEKGEVGPPGPAG 813
>BC116449-1|AAI16450.1| 1487|Homo sapiens collagen, type II, alpha 1
(primary osteoarthritis, spondyloepiphyseal dysplasi
protein.
Length = 1487
Score = 31.1 bits (67), Expect = 4.1
Identities = 37/95 (38%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
Frame = +3
Query: 240 GAPGREGALQQRG-AG-RGVPMRDGVPHQLAARGESSEAVQPPPAGRPATCLQG*GGL-- 407
GAPG G G AG G P DG P A+GE EA Q AG P QG G
Sbjct: 819 GAPGERGETGPPGPAGFAGPPGADGQP---GAKGEQGEAGQKGDAGAPGP--QGPSGAPG 873
Query: 408 QVADTSVAGQEG*GGRCPDVQRTGVGVADVPAGRV 512
T V G +G G TG A AGRV
Sbjct: 874 PQGPTGVTGPKGARGAQGPPGATGFPGA---AGRV 905
Score = 30.7 bits (66), Expect = 5.4
Identities = 19/44 (43%), Positives = 21/44 (47%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAG 371
G G EGA + G GRG+ G P A GE E P PAG
Sbjct: 771 GEKGPEGAPGKDG-GRGLTGPIGPPGPAGANGEKGEVGPPGPAG 813
>BC025710-1|AAH25710.1| 313|Homo sapiens SLC15A3 protein protein.
Length = 313
Score = 31.1 bits (67), Expect = 4.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 326 CSW*KLGSRTASSCWTTSNVPSRLRWSSS 412
C W +L SRT++SCW T+++ + W S
Sbjct: 214 CWWWRLFSRTSASCWATASLWAVWAWHFS 242
>AL606970-2|CAI14850.1| 774|Homo sapiens RP11-503C24.7 protein.
Length = 774
Score = 31.1 bits (67), Expect = 4.1
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Frame = +3
Query: 243 APGRE---GALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRPA-TCLQG*GGLQ 410
APGRE G Q RGAGRG P + G + G P +P+ +C+ +Q
Sbjct: 383 APGREDEGGPAQSRGAGRGGPQQQG---YMPLEGPQQSGSLPEEGSKPSNSCVLRETMVQ 439
Query: 411 VADTSVAGQ 437
+ +S A Q
Sbjct: 440 ASPSSKAQQ 448
>X80031-1|CAA56335.1| 1670|Homo sapiens type IV collagen alpha 3 chain
protein.
Length = 1670
Score = 30.7 bits (66), Expect = 5.4
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Frame = +3
Query: 240 GAPGREGALQQRGAGR--GVPMRDGVPHQLAARGESSEAVQPPPAGRPATCLQG 395
G PG +GA RGA G+P R G RG + P P G P + G
Sbjct: 1183 GNPGAQGAKGDRGAPGFPGLPGRKGAMGDAGPRGPTGIEGFPGPPGLPGAIIPG 1236
>U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoid
antigen 2/type XVII collagen protein.
Length = 1497
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 240 GAPGREGALQQRG-AGRGVPMRDGVPHQLAARGESSEAVQPPPAGRP 377
G PG EG + QRG G P + P +GE A +P P G P
Sbjct: 612 GDPGMEGPMGQRGREGPMGPRGEAGPPGSGEKGERGAAGEPGPHGPP 658
>M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein.
Length = 1532
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 240 GAPGREGALQQRG-AGRGVPMRDGVPHQLAARGESSEAVQPPPAGRP 377
G PG EG + QRG G P + P +GE A +P P G P
Sbjct: 647 GDPGMEGPMGQRGREGPMGPRGEAGPPGSGEKGERGAAGEPGPHGPP 693
>M63730-1|AAA51839.1| 349|Homo sapiens BPAG2 protein.
Length = 349
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 240 GAPGREGALQQRG-AGRGVPMRDGVPHQLAARGESSEAVQPPPAGRP 377
G PG EG + QRG G P + P +GE A +P P G P
Sbjct: 105 GDPGMEGPMGQRGREGPMGPRGEAGPPGSGEKGERGAAGEPGPHGPP 151
>J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein.
Length = 1806
Score = 30.7 bits (66), Expect = 5.4
Identities = 19/45 (42%), Positives = 20/45 (44%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGR 374
G PG G Q G G G DG P Q G S EA P P G+
Sbjct: 1318 GPPGELGPAGQDGVG-GDKGEDGDPGQPGPPGPSGEAGPPGPPGK 1361
>BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein.
Length = 1690
Score = 30.7 bits (66), Expect = 5.4
Identities = 19/45 (42%), Positives = 20/45 (44%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGR 374
G PG G Q G G G DG P Q G S EA P P G+
Sbjct: 1202 GPPGELGPAGQDGVG-GDKGEDGDPGQPGPPGPSGEAGPPGPPGK 1245
>BC110806-1|AAI10807.1| 234|Homo sapiens hypothetical LOC441177
protein.
Length = 234
Score = 30.7 bits (66), Expect = 5.4
Identities = 25/74 (33%), Positives = 30/74 (40%)
Frame = -2
Query: 406 RPPQP*RHVAGRPAGGGCTASELSPRAASWCGTPSRIGTPRPAPLCCNAPSRPGAPHYRH 227
R P P H+ RP GG R C R G R PLC PGAP Y +
Sbjct: 40 RLPPP--HLPARPPGGWSRNQSHQRRGPGRCWGWGR-GMTRICPLC------PGAPEYIN 90
Query: 226 AGQSSDSM*NSLGP 185
+ SS ++ S P
Sbjct: 91 SAVSSQTLSQSCTP 104
>AY358165-1|AAQ88532.1| 422|Homo sapiens LHLL9381 protein.
Length = 422
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +3
Query: 237 CGAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRPATCLQG 395
CG + + AG +P+ G P+ AA G S +Q PP GR + L+G
Sbjct: 316 CGKCKKNFRTRSWRAGSYLPLPHGSPNACAAAG-SFGTLQTPPPGRSPSALRG 367
>AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1497
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 240 GAPGREGALQQRG-AGRGVPMRDGVPHQLAARGESSEAVQPPPAGRP 377
G PG EG + QRG G P + P +GE A +P P G P
Sbjct: 612 GDPGMEGPMGQRGREGPMGPRGEAGPPGSGEKGERGAAGEPGPHGPP 658
>AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1415
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 240 GAPGREGALQQRG-AGRGVPMRDGVPHQLAARGESSEAVQPPPAGRP 377
G PG EG + QRG G P + P +GE A +P P G P
Sbjct: 612 GDPGMEGPMGQRGREGPMGPRGEAGPPGSGEKGERGAAGEPGPHGPP 658
>AK126656-1|BAC86631.1| 146|Homo sapiens protein ( Homo sapiens
cDNA FLJ44700 fis, clone BRACE3016167. ).
Length = 146
Score = 30.7 bits (66), Expect = 5.4
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +2
Query: 239 WSPWSRRRITAKRSWARCPYARWCSAPTGCSW*KLGSRTASSCWTTSNVPS 391
W+ + RR+++ +WA W P G S LGS W+ S+ PS
Sbjct: 22 WTCQTSRRVSSDPAWA----VEWIELPRGLSLSSLGSARTLRGWSRSSRPS 68
>AK094116-1|BAC04291.1| 234|Homo sapiens protein ( Homo sapiens
cDNA FLJ36797 fis, clone ADRGL2006846. ).
Length = 234
Score = 30.7 bits (66), Expect = 5.4
Identities = 25/74 (33%), Positives = 30/74 (40%)
Frame = -2
Query: 406 RPPQP*RHVAGRPAGGGCTASELSPRAASWCGTPSRIGTPRPAPLCCNAPSRPGAPHYRH 227
R P P H+ RP GG R C R G R PLC PGAP Y +
Sbjct: 40 RLPPP--HLPARPPGGWSRNQSHQRRGPGRCWGWGR-GMTRICPLC------PGAPEYIN 90
Query: 226 AGQSSDSM*NSLGP 185
+ SS ++ S P
Sbjct: 91 SAVSSQTLSQSCTP 104
>AJ288487-1|CAC36101.1| 1670|Homo sapiens alpha3 type IV collagen
protein.
Length = 1670
Score = 30.7 bits (66), Expect = 5.4
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Frame = +3
Query: 240 GAPGREGALQQRGAGR--GVPMRDGVPHQLAARGESSEAVQPPPAGRPATCLQG 395
G PG +GA RGA G+P R G RG + P P G P + G
Sbjct: 1183 GNPGAQGAKGDRGAPGFPGLPGRKGAMGDAGPRGPTGIEGFPGPPGLPGAIIPG 1236
>AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-1
protein.
Length = 1767
Score = 30.7 bits (66), Expect = 5.4
Identities = 19/45 (42%), Positives = 20/45 (44%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGR 374
G PG G Q G G G DG P Q G S EA P P G+
Sbjct: 1279 GPPGELGPAGQDGVG-GDKGEDGDPGQPGPPGPSGEAGPPGPPGK 1322
>AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-a
isoform B protein.
Length = 1818
Score = 30.7 bits (66), Expect = 5.4
Identities = 19/45 (42%), Positives = 20/45 (44%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGR 374
G PG G Q G G G DG P Q G S EA P P G+
Sbjct: 1330 GPPGELGPAGQDGVG-GDKGEDGDPGQPGPPGPSGEAGPPGPPGK 1373
>AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-1
isoform A protein.
Length = 1806
Score = 30.7 bits (66), Expect = 5.4
Identities = 19/45 (42%), Positives = 20/45 (44%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGR 374
G PG G Q G G G DG P Q G S EA P P G+
Sbjct: 1318 GPPGELGPAGQDGVG-GDKGEDGDPGQPGPPGPSGEAGPPGPPGK 1361
>AC097662-1|AAY24251.1| 1084|Homo sapiens unknown protein.
Length = 1084
Score = 30.7 bits (66), Expect = 5.4
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Frame = +3
Query: 240 GAPGREGALQQRGAGR--GVPMRDGVPHQLAARGESSEAVQPPPAGRPATCLQG 395
G PG +GA RGA G+P R G RG + P P G P + G
Sbjct: 597 GNPGAQGAKGDRGAPGFPGLPGRKGAMGDAGPRGPTGIEGFPGPPGLPGAIIPG 650
>AB208844-1|BAD92081.1| 1017|Homo sapiens alpha 1 type XI collagen
isoform C preproprotein variant protein.
Length = 1017
Score = 30.7 bits (66), Expect = 5.4
Identities = 19/45 (42%), Positives = 20/45 (44%)
Frame = +3
Query: 240 GAPGREGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGR 374
G PG G Q G G G DG P Q G S EA P P G+
Sbjct: 529 GPPGELGPAGQDGVG-GDKGEDGDPGQPGPPGPSGEAGPPGPPGK 572
>D90279-1|BAA14323.1| 1838|Homo sapiens collagen alpha 1(V) chain
precursor protein.
Length = 1838
Score = 30.3 bits (65), Expect = 7.1
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +3
Query: 240 GAPGREGALQQRGAG--RGVPMRDGVPHQLAARGESSEAVQPPPAGR 374
G PG G GA +G P G P + +GE EA +P P+GR
Sbjct: 1252 GPPGPRGPSGAPGADGPQGPPGGIGNPGAVGEKGEPGEAGEPGPSGR 1298
>BC151206-1|AAI51207.1| 1837|Homo sapiens KIAA0913 protein protein.
Length = 1837
Score = 30.3 bits (65), Expect = 7.1
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +3
Query: 252 REGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRPATCLQG*G 401
+E +++G G GVP P +L+A G + P G A L G G
Sbjct: 543 KEPGTKRKGLGEGVPSSQRGPRRLSAEGGDKALHKMGPGGGKAKALGGAG 592
>AL512662-5|CAI14438.1| 218|Homo sapiens surfactant,
pulmonary-associated protein D protein.
Length = 218
Score = 30.3 bits (65), Expect = 7.1
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Frame = +3
Query: 240 GAPGREGALQQRG-AG----RGVPMRDGVPHQLAARGES-SEAVQPPPAGRPATCLQG 395
GAPG +G+ RG AG RGVP GVP A G + + Q P R L+G
Sbjct: 161 GAPGMQGSAGARGLAGPKGERGVPGERGVPGNTGAAGSAGAMGPQGSPGARGPPGLKG 218
>AK055336-1|BAB70904.1| 140|Homo sapiens protein ( Homo sapiens
cDNA FLJ30774 fis, clone FEBRA2000772, weakly similar to
Mus musculus strain ICR 90 kDa actin-associated protein
palladin mRNA. ).
Length = 140
Score = 30.3 bits (65), Expect = 7.1
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -2
Query: 370 PAGGGC-TASELSPRAASWCGTPSRIGTPRPAPLCCNAPSRPGAPHYRHAGQSSDSM*NS 194
P+G G + + SP ASW G P T P+ LC A + G P + S+DS
Sbjct: 30 PSGAGSWSMAAASPWPASW-GFPDASSTV-PS-LCTEARAGRGGPATARSRVSADSQGGR 86
Query: 193 LGPD*NSSSLCHCSSG 146
G SS+L C +G
Sbjct: 87 AGSSSPSSALRLCCAG 102
>AB020720-1|BAA74936.1| 1301|Homo sapiens KIAA0913 protein protein.
Length = 1301
Score = 30.3 bits (65), Expect = 7.1
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +3
Query: 252 REGALQQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRPATCLQG*G 401
+E +++G G GVP P +L+A G + P G A L G G
Sbjct: 265 KEPGTKRKGLGEGVPSSQRGPRRLSAEGGDKALHKMGPGGGKAKALGGAG 314
>Y19188-1|CAB60727.1| 759|Homo sapiens aczonin protein.
Length = 759
Score = 29.9 bits (64), Expect = 9.4
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 267 QQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRP 377
+Q+G GR +DG P ++++ QPP G+P
Sbjct: 185 KQQGPGRDPLQQDGTPKSISSQQPEKIKSQPPGTGKP 221
>BC125271-1|AAI25272.1| 641|Homo sapiens PCLO protein protein.
Length = 641
Score = 29.9 bits (64), Expect = 9.4
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 267 QQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRP 377
+Q+G GR +DG P ++++ QPP G+P
Sbjct: 201 KQQGPGRDPLQQDGTPKSISSQQPEKIKSQPPGTGKP 237
>BC122565-1|AAI22566.1| 641|Homo sapiens PCLO protein protein.
Length = 641
Score = 29.9 bits (64), Expect = 9.4
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 267 QQRGAGRGVPMRDGVPHQLAARGESSEAVQPPPAGRP 377
+Q+G GR +DG P ++++ QPP G+P
Sbjct: 201 KQQGPGRDPLQQDGTPKSISSQQPEKIKSQPPGTGKP 237
>BC005010-1|AAH05010.1| 497|Homo sapiens ZFP36L2 protein protein.
Length = 497
Score = 29.9 bits (64), Expect = 9.4
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -2
Query: 370 PAGGGCTASELSPRAASWCGTPSRIGTPRPAPLCCNAPSRPGA 242
P C+++ +AS C + S TP AP CC + + A
Sbjct: 288 PPPPSCSSASSCSSSASSCSSASAASTPSGAPTCCASAAAAAA 330
>AY189690-1|AAO85223.1| 131|Homo sapiens transformation-related
protein 4 protein.
Length = 131
Score = 29.9 bits (64), Expect = 9.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -2
Query: 400 PQP*RHVAGRPAGGGCTASELSPRAASW 317
P P R G A GCT S+ SPR++ W
Sbjct: 99 PSPTRMRPGGRASTGCTESKASPRSSCW 126
>AC010883-1|AAY14992.1| 494|Homo sapiens unknown protein.
Length = 494
Score = 29.9 bits (64), Expect = 9.4
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -2
Query: 370 PAGGGCTASELSPRAASWCGTPSRIGTPRPAPLCCNAPSRPGA 242
P C+++ +AS C + S TP AP CC + + A
Sbjct: 288 PPPPSCSSASSCSSSASSCSSASAASTPSGAPTCCASAAAAAA 330
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,026,230
Number of Sequences: 237096
Number of extensions: 2440752
Number of successful extensions: 13220
Number of sequences better than 10.0: 123
Number of HSP's better than 10.0 without gapping: 11868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13133
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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