Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt20o08
(705 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyce... 57 3e-09
SPAC15A10.09c |||SUR7 family protein|Schizosaccharomyces pombe|c... 29 0.86
SPAC1039.03 |||esterase/lipase |Schizosaccharomyces pombe|chr 1|... 28 1.1
SPBC651.05c |dot2||EAP30 family protein Dot2|Schizosaccharomyces... 28 1.5
SPCC1259.11c |gyp2||GTPase activating protein Gyp2 |Schizosaccha... 27 2.0
SPBC146.04 |||sulfhydryl oxidase |Schizosaccharomyces pombe|chr ... 27 2.0
SPBP4H10.05c |spe2||S-adenosylmethionine decarboxylase proenzyme... 26 4.6
SPAC4G9.07 |mug133||S. pombe specific UPF0300 family protein 2|S... 26 4.6
SPCC1919.12c |||aminopeptidase |Schizosaccharomyces pombe|chr 3|... 26 6.0
SPBP35G2.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 26 6.0
SPBC106.13 |||conserved eukaryotic protein|Schizosaccharomyces p... 25 8.0
SPAC8F11.08c |||esterase/lipase|Schizosaccharomyces pombe|chr 1|... 25 8.0
SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regula... 25 8.0
>SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 520
Score = 56.8 bits (131), Expect = 3e-09
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 33/193 (17%)
Frame = +2
Query: 203 KFKGIPYAKPPVGHLRFLPPL-------------------PATPWTNEKDCTQDPPMALT 325
+F GI YAKPPVG LR+ P+ P + N K+ ++P
Sbjct: 20 RFTGIRYAKPPVGKLRWRRPVTLEDGYDYSGDYNQFKTICPQPFYNNRKNQVRNP----- 74
Query: 326 WSFKYEHIIGSEDCLYIEVSTPT-LKPKKLMPVMFWIGSYGFSFNMDYLYDTSLINNQDV 502
FKY+ EDCL++ + P KP + PV+++I +G + + QD+
Sbjct: 75 -DFKYD-----EDCLFLNIWVPAGEKPAEGWPVLYFI--HGGWLQVGNPLHYRQCDPQDL 126
Query: 503 ---------VFVTCGFRLGAFGFLS----INDFTAPGNCGLKDVVLALKWVQRNVDTFGG 643
+ V+ G RL FGFL+ + + N G D L L+W +++++FGG
Sbjct: 127 QADGSPAKFILVSPGHRLNLFGFLAGKELLEEDPKSSNFGFWDQRLGLEWTYKHIESFGG 186
Query: 644 DPNNVTIFGNSSG 682
+ N+ + G S+G
Sbjct: 187 NKENIAVGGISAG 199
>SPAC15A10.09c |||SUR7 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 288
Score = 28.7 bits (61), Expect = 0.86
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -1
Query: 195 VPSLVVSLYPQIGPSFVSTLNFVFSLFAVIFT 100
+ S+V+S P GP F++ VFS FA IFT
Sbjct: 196 IVSIVISCLPFFGPLFLN----VFSFFATIFT 223
>SPAC1039.03 |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 28.3 bits (60), Expect = 1.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 602 ALKWVQRNVDTFGGDPNNVTIFGNSSG 682
AL + N DT G +PN + + G+S+G
Sbjct: 157 ALLYCYENADTLGINPNKIAVGGSSAG 183
>SPBC651.05c |dot2||EAP30 family protein Dot2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 252
Score = 27.9 bits (59), Expect = 1.5
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -1
Query: 348 ICSYLNDQVKAIGGSWVQSFSLVQGVAGRGGKNRRCPTG-GFAYGMPLNLQYVPSLVVSL 172
+C +LN++ +A G W++ +V+ V + P G GF QY+ SL + L
Sbjct: 123 VCRFLNEENEAFGHEWLRETDVVRAV------DSLAPLGPGFVLEKIAGKQYIRSLPLEL 176
>SPCC1259.11c |gyp2||GTPase activating protein Gyp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 720
Score = 27.5 bits (58), Expect = 2.0
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 162 FVDTKRLPMKAHTV-NLKAFHMQNHLSDIYDSCLLSPPLLGLM 287
FV KR K+ + +L+ F ++HL +Y + LLS L L+
Sbjct: 483 FVSAKRKEFKSSVLYSLRCFTKRSHLRSVYQTTLLSNTDLDLV 525
>SPBC146.04 |||sulfhydryl oxidase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 192
Score = 27.5 bits (58), Expect = 2.0
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = -3
Query: 571 WSCKIIDRKKSKCSKPKATCYKYN 500
W+CK+ ++ K ++PK +C +N
Sbjct: 136 WACKVHNQLNEKMNQPKTSCDGFN 159
>SPBP4H10.05c |spe2||S-adenosylmethionine decarboxylase proenzyme
Spe2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 26.2 bits (55), Expect = 4.6
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1
Query: 214 HSICKTTCRTSTILASSPR 270
H I TC T+T+LAS PR
Sbjct: 92 HKIILKTCGTTTLLASLPR 110
>SPAC4G9.07 |mug133||S. pombe specific UPF0300 family protein
2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 513
Score = 26.2 bits (55), Expect = 4.6
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -1
Query: 303 WVQSFSLVQGVAGRGGKNRRCPTGGFAYGM 214
WV L+ G KN R T F YGM
Sbjct: 147 WVSKLILMDNANSIGMKNNRYSTNPFIYGM 176
>SPCC1919.12c |||aminopeptidase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 843
Score = 25.8 bits (54), Expect = 6.0
Identities = 10/35 (28%), Positives = 23/35 (65%)
Frame = -1
Query: 204 LQYVPSLVVSLYPQIGPSFVSTLNFVFSLFAVIFT 100
L ++ S+++S+Y Q+G ++ TL+++ + I T
Sbjct: 469 LVFIVSVILSIYFQLGSTYWVTLSYLCTFTCCIMT 503
>SPBP35G2.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1060
Score = 25.8 bits (54), Expect = 6.0
Identities = 15/51 (29%), Positives = 21/51 (41%)
Frame = -1
Query: 672 LPNIVTLFGSPPNVSTFL*THFNARTTSFSPQFPGAVKSLIERNPNAPSLK 520
L N+V FG + + T F+ Q P K+ R NAP L+
Sbjct: 696 LINVVQSFGFKDLSKIYQILNAACELTDFAAQIPSISKAFSSRRLNAPKLR 746
>SPBC106.13 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 404
Score = 25.4 bits (53), Expect = 8.0
Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = -1
Query: 354 PIICSYLNDQVKAIGGSWVQSFSLVQGVAGRGGKNRRCPT---GGFAYGM 214
P+ LND KA+ + + ++V + G G + CP G YG+
Sbjct: 318 PVCTPCLNDLGKALPYAHITQSAIVDSLTGEGLDSDNCPVAFPNGRVYGI 367
>SPAC8F11.08c |||esterase/lipase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 376
Score = 25.4 bits (53), Expect = 8.0
Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)
Frame = +2
Query: 542 FLSINDFTAPGNCGLKDVV----LALKWVQRNVDTFGGDPNNVTIFGNSSG 682
F+ + ++ P L D V L + W+ N + DP + G +G
Sbjct: 219 FVVVPNYAQPPKFPLSDAVEFVSLCVDWIVENAIYYDADPERIFFLGEDTG 269
>SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regulator
protein Rif1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1400
Score = 25.4 bits (53), Expect = 8.0
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +2
Query: 26 ISSWDQLNTFIKLVANC 76
ISSW+ NT++K++ C
Sbjct: 367 ISSWEYFNTWLKIIQLC 383
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,104,136
Number of Sequences: 5004
Number of extensions: 68925
Number of successful extensions: 176
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 176
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 327172622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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