Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt20o06
(696 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0921 + 21586034-21586229,21586464-21586576,21586768-215868... 95 5e-20
01_06_0628 + 30707353-30707548,30707846-30707958,30708090-307081... 87 2e-17
01_07_0051 - 40759529-40759624,40759728-40759835,40759972-407601... 76 3e-14
01_07_0052 - 40767252-40767347,40767455-40767562,40767689-407678... 74 9e-14
11_04_0455 + 17903921-17904046,17904149-17904214,17905028-179051... 73 2e-13
03_02_0387 - 8016399-8016575,8016661-8016788,8017073-8017214,801... 73 3e-13
01_07_0050 - 40751994-40752086,40752193-40752300,40752501-407526... 69 5e-12
10_02_0148 - 5859664-5859828,5859916-5860043,5860310-5860451,586... 52 3e-07
02_05_1150 + 34481965-34482076,34482174-34482268,34482380-344824... 49 3e-06
10_01_0086 - 1064650-1065379,1065796-1065950,1066029-1066141,106... 32 0.50
06_03_1058 + 27254195-27254382,27255041-27255116,27255254-272554... 32 0.50
02_03_0155 + 15805683-15805743,15805824-15806105,15808293-158089... 29 4.7
01_07_0111 - 41137822-41138973,41139453-41139540,41139850-411399... 29 4.7
05_06_0164 + 26085766-26085799,26086908-26087030,26087406-260875... 28 6.2
05_05_0360 - 24395993-24397540,24397626-24397730,24398731-24399111 28 8.1
04_04_0965 - 29762388-29762564,29764272-29766361,29766567-297671... 28 8.1
>10_08_0921 +
21586034-21586229,21586464-21586576,21586768-21586875,
21586967-21587205,21587301-21587399,21587448-21587535,
21587617-21587750,21588274-21588362,21588718-21588751,
21588830-21588898,21589216-21589339
Length = 430
Score = 95.1 bits (226), Expect = 5e-20
Identities = 60/150 (40%), Positives = 84/150 (56%), Gaps = 18/150 (12%)
Frame = +3
Query: 243 FCANNYLGLSNHPEVVEAAREGLKKYGAGLSSVRFICGTQSIHKELENRLSQFHGREDTI 422
F N+Y+GLS+HP + AA + ++YG G ICG + HK +E L++ +ED +
Sbjct: 83 FSGNDYMGLSSHPAIRHAAVKAAEEYGMGPRGSALICGYTTYHKMVEESLAELKKKEDCL 142
Query: 423 LYGSCFDAN------AGLFESMLT-----PED---AVFSDALNHASIIDGIRLCKAQK-- 554
L + F AN G S+L ED A+FSDALNHASIIDGIRL + Q+
Sbjct: 143 LCPTGFSANMAVMTALGNISSLLAAGRKPAEDERIAIFSDALNHASIIDGIRLVERQQEV 202
Query: 555 --YRYPHRDLTELEHLLAHSEARIKLIVTD 638
+ Y H D++ LE LL+ K++VTD
Sbjct: 203 VSFVYKHCDMSHLELLLSSCSMEKKVVVTD 232
>01_06_0628 +
30707353-30707548,30707846-30707958,30708090-30708197,
30708305-30708543,30708774-30708861,30708942-30709075,
30709285-30709498,30709671-30709759,30710194-30710262,
30710560-30710683
Length = 457
Score = 86.6 bits (205), Expect = 2e-17
Identities = 63/165 (38%), Positives = 88/165 (53%), Gaps = 18/165 (10%)
Frame = +3
Query: 243 FCANNYLGLSNHPEVVEAAREGLKKYGAGLSSVRFICGTQSIHKELENRLSQFHGREDTI 422
F N+Y+GLS+HP + +AA + ++YG G ICG + HK +E L++ +ED +
Sbjct: 83 FSGNDYMGLSSHPAIRKAAVKAAQEYGMGPRGSALICGYTTYHKLVEESLAELKKKEDCL 142
Query: 423 LYGSCFDAN------AGLFESMLT----PED----AVFSDALNHASIIDGIRLCKAQK-- 554
L + F AN G S+L+ P + AVFSDALNHASIIDGIRL + Q+
Sbjct: 143 LCPTGFSANMAVMTALGSVSSILSVGRKPAEGERIAVFSDALNHASIIDGIRLVERQQEV 202
Query: 555 --YRYPHRDLTELEHLLAHSEARIKLIVTDGVFSMDGTVAPIKGL 683
+ Y H D+ L+ LL +FSMDG AP+ L
Sbjct: 203 VAFVYKHCDMHHLDFLL--------------LFSMDGDFAPLPEL 233
>01_07_0051 -
40759529-40759624,40759728-40759835,40759972-40760138,
40760670-40760796,40760885-40761046,40761235-40761398,
40761561-40761654,40761736-40761860,40762304-40762449,
40762796-40762884,40763453-40763518,40763824-40763973
Length = 497
Score = 75.8 bits (178), Expect = 3e-14
Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
Frame = +3
Query: 237 LNFCANNYLGLSNHPEV-VEAAREGLKKYGAGLSSVRFICGTQSIHKELENRLSQFHGRE 413
LN + NYLG + E E LKKY A SVR G +H ELE +++F G+
Sbjct: 111 LNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSVRVDGGNTKLHVELEELVARFVGKP 170
Query: 414 DTILYGSCFDANAGLFESMLTPEDAVFSDALNHASIIDGIRLCKAQKYRYPHRDLTELEH 593
IL+G + N+ + +++ + SD+LNH SI++G R A + H + LE
Sbjct: 171 AAILFGMGYVTNSAIIPALIGKGGLIISDSLNHNSIVNGARGSGASVQVFQHNNPAHLEE 230
Query: 594 LL----------AHSEARIKLIVTDGVFSMDGTVAPI 674
+L H + +++ +G++SM+G + +
Sbjct: 231 VLREQIAGGQPRTHRRWKKIIVIVEGIYSMEGELCKL 267
>01_07_0052 -
40767252-40767347,40767455-40767562,40767689-40767855,
40767930-40768056,40768138-40768299,40768467-40768630,
40768722-40768815,40768892-40769016,40769110-40769255,
40769361-40769449,40769564-40769608,40770165-40770230,
40770332-40770457
Length = 504
Score = 74.1 bits (174), Expect = 9e-14
Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
Frame = +3
Query: 237 LNFCANNYLGLSNHPEV-VEAAREGLKKYGAGLSSVRFICGTQSIHKELENRLSQFHGRE 413
LN + NYLG + E E LKKY A SVR G +H ELE +++F G+
Sbjct: 118 LNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSVRVDGGNTKLHVELEELVARFVGKP 177
Query: 414 DTILYGSCFDANAGLFESMLTPEDAVFSDALNHASIIDGIRLCKAQKYRYPHRDLTELEH 593
IL+G + N+ + +++ + SD+LNH SI++G R A + H + LE
Sbjct: 178 AAILFGMGYVTNSAIIPALVGKGGLIISDSLNHNSIVNGARGSGATVRVFQHNNPAHLEE 237
Query: 594 LL----------AHSEARIKLIVTDGVFSMDGTVAPI 674
+L H + +++ +G++SM+G + +
Sbjct: 238 VLREQIAGGQPRTHRPWKKIIVIVEGIYSMEGELCKL 274
>11_04_0455 +
17903921-17904046,17904149-17904214,17905028-17905116,
17905513-17905658,17905743-17905867,17905964-17906057,
17906144-17906307,17906449-17906610,17906683-17906809,
17906854-17906862,17906912-17907078,17907113-17907307,
17907398-17907490
Length = 520
Score = 73.3 bits (172), Expect = 2e-13
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Frame = +3
Query: 237 LNFCANNYLGLSNHPEV-VEAAREGLKKYGAGLSSVRFICGTQSIHKELENRLSQFHGRE 413
LN + NYLG + E E LKKY SVR GT +H ELE +++F G+
Sbjct: 103 LNLGSYNYLGFAAADEYCTPLVIESLKKYSPSTCSVRVDGGTTKLHTELEELVARFVGKP 162
Query: 414 DTILYGSCFDANAGLFESMLTPEDAVFSDALNHASIIDGIRLCKAQKYRYPHRDLTELEH 593
IL+G + N+ + ++ + SD+LNH SI++G R A + H LE
Sbjct: 163 AAILFGMGYVTNSAIIPCLVGKGGLIISDSLNHNSIVNGARGSGATVRVFQHNSPAHLEE 222
Query: 594 LL----------AHSEARIKLIVTDGVFSMDGTVAPI 674
+L H + +++ +G++SM+G + +
Sbjct: 223 VLREQIAGGQPRTHRPWKKIIVIVEGIYSMEGELCKL 259
>03_02_0387 -
8016399-8016575,8016661-8016788,8017073-8017214,
8017301-8017396,8017572-8017712,8017857-8018031,
8018443-8018575,8018661-8018733,8018807-8018900,
8019890-8019981,8020091-8020185,8020267-8020378
Length = 485
Score = 72.5 bits (170), Expect = 3e-13
Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 7/155 (4%)
Frame = +3
Query: 231 EFLNFCANNYLGLSNHPEVVEAAREGLKKYGAGLSSVRFICGTQSIHKELENRLSQFHGR 410
E +NF + NYLGL + +++++ L+KYG G R GT +H + E ++++F G
Sbjct: 112 EVINFASANYLGLIGNEKIIDSCVGSLEKYGVGSCGPRGFYGTIDVHLDCEAKIAKFLGT 171
Query: 411 EDTILYGSCFDANAGLFESMLTPEDAVFSDALNHASIIDGIRLCKAQKYRYPHRDLTELE 590
D+ILY + + D + +D H ++ +G+ L ++ + H D+ L
Sbjct: 172 PDSILYSYGISTIFSVIPAFCKKGDIIVADEGVHWAVQNGLHLSRSTVVYFKHNDMASLA 231
Query: 591 HLL-------AHSEARIKLIVTDGVFSMDGTVAPI 674
+ L +E + IV + ++ G +AP+
Sbjct: 232 NTLEKLTRGNKRAEKIRRYIVVESIYQNSGQIAPL 266
>01_07_0050 -
40751994-40752086,40752193-40752300,40752501-40752667,
40752756-40752882,40752984-40753145,40753674-40753837,
40753931-40754024,40754160-40754284,40754387-40754532,
40754676-40754764,40755524-40755589,40755990-40756148
Length = 499
Score = 68.5 bits (160), Expect = 5e-12
Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 11/157 (7%)
Frame = +3
Query: 237 LNFCANNYLGLSNHPEV-VEAAREGLKKYGAGLSSVRFICGTQSIHKELENRLSQFHGRE 413
LN + NYLG + E E LKKY A S R G +H ELE +++F +
Sbjct: 114 LNLASFNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGNTQLHIELEELVARFVRKP 173
Query: 414 DTILYGSCFDANAGLFESMLTPEDAVFSDALNHASIIDGIRLCKAQKYRYPHRDLTELEH 593
IL + N+ + +++ + SD+LNH SI+ G R A + H + LE
Sbjct: 174 SAILLAMGYATNSAIIPALIGKGGLIISDSLNHNSIVSGARASGATIRVFEHNNPAHLEK 233
Query: 594 LL----------AHSEARIKLIVTDGVFSMDGTVAPI 674
LL H + L++ +G++SM+G + +
Sbjct: 234 LLREQISGGQPRTHRAWKKILVIVEGIYSMEGELCKL 270
>10_02_0148 -
5859664-5859828,5859916-5860043,5860310-5860451,
5860548-5860643,5860836-5860976,5861799-5861973,
5862416-5862702,5862777-5862870,5863244-5863335,
5863459-5863553,5863648-5863759
Length = 508
Score = 52.4 bits (120), Expect = 3e-07
Identities = 40/182 (21%), Positives = 81/182 (44%), Gaps = 34/182 (18%)
Frame = +3
Query: 231 EFLNFCANNYLGLSNHPEVVEAAREGLKKYGAG-----------------LSSVRFICGT 359
E +NF + NYLGL + +++++ ++KYG G L S+ +I
Sbjct: 112 EVVNFASANYLGLIGNEKIIDSCVGSVEKYGVGSCGPRSFYGTIGSYLLWLFSIIYILWP 171
Query: 360 QS----------IHKELENRLSQFHGREDTILYGSCFDANAGLFESMLTPEDAVFSDALN 509
Q +H + E++++ F G +D+ILY + + D + +D
Sbjct: 172 QKKNLAILWFADVHLDCESKIANFLGTQDSILYSYGISTIFSVIPAFCKKGDIIVADEGV 231
Query: 510 HASIIDGIRLCKAQKYRYPHRDLTELEHLLA-------HSEARIKLIVTDGVFSMDGTVA 668
H ++ +G++L ++ + H D+ L +L H+E + IV + ++ G +A
Sbjct: 232 HWAVQNGLQLSRSTVVYFKHNDMASLASILEKLTHGNKHTEKIRRYIVVEAIYQNSGQIA 291
Query: 669 PI 674
P+
Sbjct: 292 PL 293
>02_05_1150 +
34481965-34482076,34482174-34482268,34482380-34482471,
34482878-34482971,34483191-34483354,34483755-34483929,
34484017-34484157,34484357-34484452,34484549-34484690,
34484953-34485080,34485179-34485343
Length = 467
Score = 49.2 bits (112), Expect = 3e-06
Identities = 35/155 (22%), Positives = 70/155 (45%), Gaps = 7/155 (4%)
Frame = +3
Query: 231 EFLNFCANNYLGLSNHPEVVEAAREGLKKYGAGLSSVRFICGTQSIHKELENRLSQFHGR 410
E +NF + NYLGL + +++ G L+ + F +H + E ++++F G
Sbjct: 112 EVVNFASANYLGLIGNEKIL----------GRNLAILLF----SDVHLDCETKIAKFLGT 157
Query: 411 EDTILYGSCFDANAGLFESMLTPEDAVFSDALNHASIIDGIRLCKAQKYRYPHRDLTELE 590
+D+ILY + + D + +D H ++ +G++L ++ + H D+ L
Sbjct: 158 QDSILYSYGISTIFSVIPAFCKKGDIIVADEGVHWAVQNGLQLSRSTVVYFKHNDMASLA 217
Query: 591 ---HLLAHSEARI----KLIVTDGVFSMDGTVAPI 674
L H R + IV + ++ G +AP+
Sbjct: 218 STLEKLTHGNKRTEKIRRYIVVEAIYQNSGQIAPL 252
>10_01_0086 -
1064650-1065379,1065796-1065950,1066029-1066141,
1066238-1066345,1066773-1066890,1066996-1067069,
1067595-1067690,1068062-1068455
Length = 595
Score = 31.9 bits (69), Expect = 0.50
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = -2
Query: 617 SCFAVR*QVLQFGQISVRVSVFLRLA*PDPVYYGRVVQSVREHRVFRRQHGLEQACVGVE 438
+CF V +V+ ++V + L D G+V+ V E + RR+ GLE V V
Sbjct: 176 TCFVVN-EVIDGRMVNVLEGLKLYKGYVDLTEIGKVLSFVNEAKTMRRKPGLEGQTVVVA 234
Query: 437 TRPVK 423
RP+K
Sbjct: 235 KRPMK 239
>06_03_1058 +
27254195-27254382,27255041-27255116,27255254-27255418,
27255580-27255671,27255713-27255754,27256342-27256387,
27258456-27258683
Length = 278
Score = 31.9 bits (69), Expect = 0.50
Identities = 21/78 (26%), Positives = 38/78 (48%)
Frame = +3
Query: 267 LSNHPEVVEAAREGLKKYGAGLSSVRFICGTQSIHKELENRLSQFHGREDTILYGSCFDA 446
L N + +EA+ ++ G LSSV + + +LE+ LS+ H R+D ++ D
Sbjct: 97 LRNEIDQLEASLR--RQTGEDLSSVSTVDELSQLQLQLESSLSKVHARKDELMSQQLEDM 154
Query: 447 NAGLFESMLTPEDAVFSD 500
+ S++ VF+D
Sbjct: 155 RRMVHYSLIVVAVVVFAD 172
>02_03_0155 +
15805683-15805743,15805824-15806105,15808293-15808959,
15809440-15810490
Length = 686
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -1
Query: 519 WTRGSKRPRTPRLQASAWTRTGLRWRRNKTRKGLCLRGRGTE 394
WT +K +W+ RWRR K R+GL GR TE
Sbjct: 237 WT--TKEREKAAASRGSWSVGRRRWRRGKWRRGLGGVGRRTE 276
>01_07_0111 - 41137822-41138973,41139453-41139540,41139850-41139969,
41140165-41140211,41140796-41141029,41141305-41141505,
41141506-41143407,41144140-41145303,41145574-41145879
Length = 1737
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 60 QVRHLHEVKRQERAGVAKLRDVLEDR 137
+VRHL V+R E A A LRD++E R
Sbjct: 956 EVRHLENVERLEDARKANLRDMVELR 981
>05_06_0164 +
26085766-26085799,26086908-26087030,26087406-26087525,
26087632-26087696
Length = 113
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +3
Query: 102 GVAKLRDVLEDRLQEIKRAKTWKHERVLTSPQDTKVR 212
G A +++ +++K+ K WKH + +T Q +K+R
Sbjct: 2 GCAGSTPKVDENSKKLKKPKPWKHTQAITPTQLSKMR 38
>05_05_0360 - 24395993-24397540,24397626-24397730,24398731-24399111
Length = 677
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 111 KLRDVLEDRLQEIKRAKTWKHERVLTSPQDTKV 209
K+RD +E+ + ++ A+ W+ ERV D K+
Sbjct: 340 KMRDEVEEEKKMLQMAEVWREERVQMKLVDAKL 372
>04_04_0965 -
29762388-29762564,29764272-29766361,29766567-29767170,
29768395-29768637,29768704-29770203
Length = 1537
Score = 27.9 bits (59), Expect = 8.1
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = +3
Query: 201 TKVRVQGAQGEFLNFCANNYLGLSNHPEVVEAAREGLKKYGAGLSSVRF---ICGTQSIH 371
TKVRV+G Q + A + HP A+R L++ S + +CG
Sbjct: 519 TKVRVKGPQCSSASHAARRHARGMGHPVKKAASRSCLQRPSVSRDSQQMPESVCGPPG-- 576
Query: 372 KELENRLSQFHG 407
K L N S HG
Sbjct: 577 KMLSNASSIIHG 588
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,258,376
Number of Sequences: 37544
Number of extensions: 360115
Number of successful extensions: 1163
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1159
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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