Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt20n11
(728 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D61380-1|BAA09603.2| 189|Homo sapiens DJ-1 protein protein. 163 4e-40
BC008188-1|AAH08188.1| 189|Homo sapiens Parkinson disease (auto... 163 4e-40
AL034417-1|CAB52550.1| 189|Homo sapiens Parkinson disease (auto... 163 4e-40
AF021819-1|AAC12806.1| 189|Homo sapiens RNA-binding protein reg... 163 4e-40
AB073864-1|BAB71782.1| 189|Homo sapiens DJ-1 protein. 163 4e-40
AY648999-1|AAT68961.1| 52|Homo sapiens DJ-1 protein. 50 1e-05
>D61380-1|BAA09603.2| 189|Homo sapiens DJ-1 protein protein.
Length = 189
Score = 163 bits (397), Expect = 4e-40
Identities = 88/187 (47%), Positives = 119/187 (63%), Gaps = 1/187 (0%)
Frame = +2
Query: 95 SKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEAL 274
SK ALVILA+GAEEMETVI VD++RR G+ VT+AGL G PV CSR V + PD SL +A
Sbjct: 3 SKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAK 62
Query: 275 AEKQQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXHGVARGR 454
E YD V+LPGG G+ +LS+S V +LK+ E+ H + G
Sbjct: 63 KE-GPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPTALLAHEIGFGS 121
Query: 455 RVTSYPSTRDK-LSAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLTLIELLTGKEKADQ 631
+VT++P +DK ++ G YTY E RV DG ++TSRGPGT++ F L ++E L GKE A Q
Sbjct: 122 KVTTHPLAKDKMMNGGHYTYSE-NRVEKDGLILTSRGPGTSFEFALAIVEALNGKEVAAQ 180
Query: 632 VEKGMLI 652
V+ +++
Sbjct: 181 VKAPLVL 187
>BC008188-1|AAH08188.1| 189|Homo sapiens Parkinson disease
(autosomal recessive, early onset) 7 protein.
Length = 189
Score = 163 bits (397), Expect = 4e-40
Identities = 88/187 (47%), Positives = 119/187 (63%), Gaps = 1/187 (0%)
Frame = +2
Query: 95 SKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEAL 274
SK ALVILA+GAEEMETVI VD++RR G+ VT+AGL G PV CSR V + PD SL +A
Sbjct: 3 SKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAK 62
Query: 275 AEKQQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXHGVARGR 454
E YD V+LPGG G+ +LS+S V +LK+ E+ H + G
Sbjct: 63 KE-GPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPTALLAHEIGFGS 121
Query: 455 RVTSYPSTRDK-LSAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLTLIELLTGKEKADQ 631
+VT++P +DK ++ G YTY E RV DG ++TSRGPGT++ F L ++E L GKE A Q
Sbjct: 122 KVTTHPLAKDKMMNGGHYTYSE-NRVEKDGLILTSRGPGTSFEFALAIVEALNGKEVAAQ 180
Query: 632 VEKGMLI 652
V+ +++
Sbjct: 181 VKAPLVL 187
>AL034417-1|CAB52550.1| 189|Homo sapiens Parkinson disease
(autosomal recessive, early onset) 7 protein.
Length = 189
Score = 163 bits (397), Expect = 4e-40
Identities = 88/187 (47%), Positives = 119/187 (63%), Gaps = 1/187 (0%)
Frame = +2
Query: 95 SKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEAL 274
SK ALVILA+GAEEMETVI VD++RR G+ VT+AGL G PV CSR V + PD SL +A
Sbjct: 3 SKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAK 62
Query: 275 AEKQQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXHGVARGR 454
E YD V+LPGG G+ +LS+S V +LK+ E+ H + G
Sbjct: 63 KE-GPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPTALLAHEIGFGS 121
Query: 455 RVTSYPSTRDK-LSAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLTLIELLTGKEKADQ 631
+VT++P +DK ++ G YTY E RV DG ++TSRGPGT++ F L ++E L GKE A Q
Sbjct: 122 KVTTHPLAKDKMMNGGHYTYSE-NRVEKDGLILTSRGPGTSFEFALAIVEALNGKEVAAQ 180
Query: 632 VEKGMLI 652
V+ +++
Sbjct: 181 VKAPLVL 187
>AF021819-1|AAC12806.1| 189|Homo sapiens RNA-binding protein
regulatory subunit protein.
Length = 189
Score = 163 bits (397), Expect = 4e-40
Identities = 88/187 (47%), Positives = 119/187 (63%), Gaps = 1/187 (0%)
Frame = +2
Query: 95 SKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEAL 274
SK ALVILA+GAEEMETVI VD++RR G+ VT+AGL G PV CSR V + PD SL +A
Sbjct: 3 SKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAK 62
Query: 275 AEKQQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXHGVARGR 454
E YD V+LPGG G+ +LS+S V +LK+ E+ H + G
Sbjct: 63 KE-GPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPTALLAHEIGFGS 121
Query: 455 RVTSYPSTRDK-LSAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLTLIELLTGKEKADQ 631
+VT++P +DK ++ G YTY E RV DG ++TSRGPGT++ F L ++E L GKE A Q
Sbjct: 122 KVTTHPLAKDKMMNGGHYTYSE-NRVEKDGLILTSRGPGTSFEFALAIVEALNGKEVAAQ 180
Query: 632 VEKGMLI 652
V+ +++
Sbjct: 181 VKAPLVL 187
>AB073864-1|BAB71782.1| 189|Homo sapiens DJ-1 protein.
Length = 189
Score = 163 bits (397), Expect = 4e-40
Identities = 88/187 (47%), Positives = 119/187 (63%), Gaps = 1/187 (0%)
Frame = +2
Query: 95 SKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEAL 274
SK ALVILA+GAEEMETVI VD++RR G+ VT+AGL G PV CSR V + PD SL +A
Sbjct: 3 SKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAK 62
Query: 275 AEKQQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXHGVARGR 454
E YD V+LPGG G+ +LS+S V +LK+ E+ H + G
Sbjct: 63 KE-GPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPTALLAHEIGCGS 121
Query: 455 RVTSYPSTRDK-LSAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLTLIELLTGKEKADQ 631
+VT++P +DK ++ G YTY E RV DG ++TSRGPGT++ F L ++E L GKE A Q
Sbjct: 122 KVTTHPLAKDKMMNGGHYTYSE-NRVEKDGLILTSRGPGTSFEFALAIVEALNGKEVAAQ 180
Query: 632 VEKGMLI 652
V+ +++
Sbjct: 181 VKAPLVL 187
>AY648999-1|AAT68961.1| 52|Homo sapiens DJ-1 protein.
Length = 52
Score = 49.6 bits (113), Expect = 1e-05
Identities = 24/50 (48%), Positives = 34/50 (68%)
Frame = +2
Query: 503 YTYVEGERVVVDGNVVTSRGPGTAYWFGLTLIELLTGKEKADQVEKGMLI 652
YTY E RV D ++TSRGPGT++ F L ++E L GKE A QV+ +++
Sbjct: 2 YTYSEN-RVEKDSLILTSRGPGTSFEFALAIVEALNGKEVAAQVKAPLVL 50
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,978,307
Number of Sequences: 237096
Number of extensions: 1705226
Number of successful extensions: 3724
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3693
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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