BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt20n09
(763 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 173 2e-45
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 173 2e-45
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 102 3e-24
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 93 2e-21
AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor prot... 76 4e-16
AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced prot... 51 1e-08
AB264334-1|BAF44089.1| 30|Apis mellifera ecdysone-induced prot... 43 3e-06
AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein. 30 0.020
AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta... 30 0.020
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 23 4.1
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 22 5.4
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 21 9.4
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 173 bits (420), Expect = 2e-45
Identities = 87/196 (44%), Positives = 126/196 (64%), Gaps = 3/196 (1%)
Frame = +2
Query: 164 SQH-CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHLYTCRFSRNCVVDKDKRNQCRYC 340
S+H C+ICGDRA+GKHYG SC+GCKGFF+R+VRK+ Y CR ++C++DK +RN+C+YC
Sbjct: 106 SKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREEKSCIIDKRQRNRCQYC 165
Query: 341 RLRKCFKAGMKKEAVQNERDRINCRRPSYEEPTQA--NGLSVVSLLNAELLSRKVIDETV 514
R +KC GMK+EAVQ ER R R S E T + + + + +L AE +++
Sbjct: 166 RYQKCLAMGMKREAVQEERQRTKERDQSEVESTSSLHSDMPIERILEAEKRVECKMEQQG 225
Query: 515 NVSDAEINNRKLAKINDVCDSIKQQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLL 694
N +A ++ +C++ +QL LV WAK+IP FT L L+DQV LLRA E L+
Sbjct: 226 NYENA---------VSHICNATNKQLFQLVAWAKHIPHFTSLPLEDQVLLLRAGWNELLI 276
Query: 695 LGCARRSLHLKDILLL 742
+ RS+ +KD ++L
Sbjct: 277 ASFSHRSIDVKDGIVL 292
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 173 bits (420), Expect = 2e-45
Identities = 87/196 (44%), Positives = 126/196 (64%), Gaps = 3/196 (1%)
Frame = +2
Query: 164 SQH-CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHLYTCRFSRNCVVDKDKRNQCRYC 340
S+H C+ICGDRA+GKHYG SC+GCKGFF+R+VRK+ Y CR ++C++DK +RN+C+YC
Sbjct: 106 SKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREEKSCIIDKRQRNRCQYC 165
Query: 341 RLRKCFKAGMKKEAVQNERDRINCRRPSYEEPTQA--NGLSVVSLLNAELLSRKVIDETV 514
R +KC GMK+EAVQ ER R R S E T + + + + +L AE +++
Sbjct: 166 RYQKCLAMGMKREAVQEERQRTKERDQSEVESTSSLHSDMPIERILEAEKRVECKMEQQG 225
Query: 515 NVSDAEINNRKLAKINDVCDSIKQQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLL 694
N +A ++ +C++ +QL LV WAK+IP FT L L+DQV LLRA E L+
Sbjct: 226 NYENA---------VSHICNATNKQLFQLVAWAKHIPHFTSLPLEDQVLLLRAGWNELLI 276
Query: 695 LGCARRSLHLKDILLL 742
+ RS+ +KD ++L
Sbjct: 277 ASFSHRSIDVKDGIVL 292
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 102 bits (245), Expect = 3e-24
Identities = 39/74 (52%), Positives = 52/74 (70%)
Frame = +2
Query: 173 CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHLYTCRFSRNCVVDKDKRNQCRYCRLRK 352
C +CGDRA+G HY A +C+GCKGFFRRS+ KN +Y C++ NC +D R +C+ CRL+K
Sbjct: 187 CLVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYQCKYGNNCEIDMYMRRKCQECRLKK 246
Query: 353 CFKAGMKKEAVQNE 394
C GM+ E V E
Sbjct: 247 CLTVGMRPECVVPE 260
Score = 39.9 bits (89), Expect = 3e-05
Identities = 19/51 (37%), Positives = 33/51 (64%)
Frame = +2
Query: 596 ILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILLLGN 748
++VE++K +P F EL +DQ+ALL+A + E ++L AR+ D ++ N
Sbjct: 388 LIVEFSKRLPGFDELMREDQIALLKACSSEVMMLRMARKYDVQTDSIIFAN 438
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 93.5 bits (222), Expect = 2e-21
Identities = 36/73 (49%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Frame = +2
Query: 173 CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHLY-TCRFSRNCVVDKDKRNQCRYCRLR 349
C +CGD+A+G HYG SC+GCKGFFRRS+++ Y C ++ C + + RN+C+YCRL+
Sbjct: 67 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 126
Query: 350 KCFKAGMKKEAVQ 388
KC GM ++AV+
Sbjct: 127 KCIAVGMSRDAVR 139
Score = 34.3 bits (75), Expect = 0.001
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +2
Query: 599 LVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCA 706
+VE+AK IP F+ L DDQV LL+A E LL+ A
Sbjct: 249 VVEFAKRIPGFSLLAQDDQVTLLKAGVFEVLLVRLA 284
>AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor
protein.
Length = 72
Score = 75.8 bits (178), Expect = 4e-16
Identities = 28/57 (49%), Positives = 39/57 (68%)
Frame = +2
Query: 224 CDGCKGFFRRSVRKNHLYTCRFSRNCVVDKDKRNQCRYCRLRKCFKAGMKKEAVQNE 394
C+GCKGFFRRS+ KN +Y C++ NC +D R +C+ CRL+KC GM+ E + E
Sbjct: 1 CEGCKGFFRRSITKNAVYQCKYGNNCEIDMYMRRKCQECRLKKCLTVGMRPECMVPE 57
>AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced protein
75 protein.
Length = 87
Score = 51.2 bits (117), Expect = 1e-08
Identities = 20/49 (40%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Frame = +2
Query: 236 KGFFRRSVRKNHLYT-CRFSRNCVVDKDKRNQCRYCRLRKCFKAGMKKE 379
+GFFRRS+++ Y C ++ C + + RN+C+YCRL+KC GM ++
Sbjct: 39 QGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLKKCIAVGMSRD 87
>AB264334-1|BAF44089.1| 30|Apis mellifera ecdysone-induced protein
75 protein.
Length = 30
Score = 43.2 bits (97), Expect = 3e-06
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +2
Query: 173 CAICGDRATGKHYGASSCDGCK 238
C +CGD+A+G HYG SC+GCK
Sbjct: 9 CRVCGDKASGFHYGVHSCEGCK 30
>AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein.
Length = 145
Score = 30.3 bits (65), Expect = 0.020
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +2
Query: 212 GASSCDGCKGFFRRSVRKNHLYTCRFSRNCVVDKDKRNQCRYCRLRKCFKA-GMKKEAVQ 388
G S C+GF V+ + T FS+ C ++ + R+ L C+ A G+K +
Sbjct: 62 GDISVTKCEGFCNSQVQPSVASTTGFSKECYCCRESYLKERHITLHHCYDADGIKLMNEE 121
Query: 389 NERDRINCRRP 421
N I R P
Sbjct: 122 NGVMEIKIREP 132
>AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta
protein precursor protein.
Length = 145
Score = 30.3 bits (65), Expect = 0.020
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +2
Query: 212 GASSCDGCKGFFRRSVRKNHLYTCRFSRNCVVDKDKRNQCRYCRLRKCFKA-GMKKEAVQ 388
G S C+GF V+ + T FS+ C ++ + R+ L C+ A G+K +
Sbjct: 62 GDISVTKCEGFCNSQVQPSVASTTGFSKECYCCRESYLKERHITLHHCYDADGIKLMNEE 121
Query: 389 NERDRINCRRP 421
N I R P
Sbjct: 122 NGVMEIKIREP 132
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 22.6 bits (46), Expect = 4.1
Identities = 9/29 (31%), Positives = 12/29 (41%)
Frame = +2
Query: 164 SQHCAICGDRATGKHYGASSCDGCKGFFR 250
S C C + YG + C G+FR
Sbjct: 276 SHSCEACPAHSKSSDYGFTECRCDPGYFR 304
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 22.2 bits (45), Expect = 5.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -2
Query: 492 LLRSSALRSDTTDRPLACVGS 430
L RSSAL S T PLA V +
Sbjct: 130 LSRSSALASKATGYPLAYVAA 150
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 21.4 bits (43), Expect = 9.4
Identities = 8/22 (36%), Positives = 11/22 (50%), Gaps = 1/22 (4%)
Frame = -3
Query: 182 RWRNAGIWSWNWLR-LPRYCSS 120
RW G + W+W +P Y S
Sbjct: 171 RWVQQGAFGWSWDEVMPYYLKS 192
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,701
Number of Sequences: 438
Number of extensions: 4930
Number of successful extensions: 19
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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