Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt20m21
(728 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 compon... 60 2e-10
SPCC1259.09c |||pyruvate dehydrogenase protein x component|Schiz... 44 2e-05
SPCC794.07 |||dihydrolipoamide S-acetyltransferase E2 |Schizosac... 38 0.001
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 33 0.032
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 32 0.096
SPCC1840.09 |||NAD dependent epimerase/dehydratase family protei... 30 0.39
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 30 0.39
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 30 0.39
SPCC1259.07 |||transcriptional regulatory protein Rxt3 |Schizosa... 29 0.68
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 29 0.90
SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|ch... 27 2.1
SPBC24C6.03 |||proline-tRNA ligase |Schizosaccharomyces pombe|ch... 27 2.7
SPAC823.05c |tlg2||SNARE Tlg2|Schizosaccharomyces pombe|chr 1|||... 27 2.7
SPCC737.03c |||conserved eukaryotic protein|Schizosaccharomyces ... 26 4.8
SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces pomb... 26 6.3
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 6.3
SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyc... 26 6.3
SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|c... 26 6.3
SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomy... 26 6.3
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 25 8.4
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 8.4
SPAC1F5.05c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 8.4
>SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 component
of oxoglutarate dehydrogenase complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 60.5 bits (140), Expect = 2e-10
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = +1
Query: 319 VTTPSFPDSVSEGDV-KLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKDG 495
+ TP FP+S++EG + + K+ G+ V DE + +ETDK PV AP GV+KE VK+G
Sbjct: 45 IKTPPFPESITEGTLAQWLKQPGEYVNKDEEIASVETDKIDAPVTAPDAGVLKEQLVKEG 104
Query: 496 ETVKAGQKL 522
+T+ Q +
Sbjct: 105 DTITIDQDI 113
>SPCC1259.09c |||pyruvate dehydrogenase protein x
component|Schizosaccharomyces pombe|chr 3|||Manual
Length = 456
Score = 44.0 bits (99), Expect = 2e-05
Identities = 18/66 (27%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = +1
Query: 328 PSFPDSVSEGDV-KLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKDGETV 504
P+ ++ EG++ K K GDS + +++LE+ETDK + V +G++ ++ ++ G +
Sbjct: 41 PALSPTMEEGNITKWHFKEGDSFKSGDILLEVETDKATMDVEVQDNGILAKVLIEKGSNI 100
Query: 505 KAGQKL 522
G+ +
Sbjct: 101 PVGKNI 106
>SPCC794.07 |||dihydrolipoamide S-acetyltransferase E2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 483
Score = 37.9 bits (84), Expect = 0.001
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = +1
Query: 319 VTTPSFPDSVSEGDV-KLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKDG 495
+ P+ +++ G++ KK+GD + +V+ EIETDK I G + ++ ++ G
Sbjct: 56 INMPALSPTMTTGNIGAFQKKIGDKIEPGDVLCEIETDKAQIDFEQQDEGYLAKILIETG 115
Query: 496 -ETVKAGQKL 522
+ V G+ L
Sbjct: 116 TKDVPVGKPL 125
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 33.5 bits (73), Expect = 0.032
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
Frame = -1
Query: 509 ALTVSPSLTYNSLMTP----WPGAMTGMAVL-----SVSISRTTSSAATLSPTFLSNLTS 357
+L +P Y SLM W +TG VL S S+S TTSS+++ SP+ S T+
Sbjct: 93 SLCTTPCPGYGSLMCGGDLYWSVYLTGNGVLQTTVSSSSVSSTTSSSSSSSPSSSSTTTT 152
Query: 356 PSETESGKLGVVTSCSTS 303
S + S +S S+S
Sbjct: 153 TSPSSSSSSSSSSSSSSS 170
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 31.9 bits (69), Expect = 0.096
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = -1
Query: 548 ASPVISNLNS-FCPALTVSPSLTYNSLMTPWPGAMTGMAVLSVSISRTTSSAATLSPTFL 372
A+P S+ S F + T S + +Y+S ++ + T S S TSS T S T
Sbjct: 76 ATPTSSSEPSIFSESATPSETNSYSSPVSSYSDPATSQLPSSTSFFSPTSSEYTPSSTES 135
Query: 371 SNLTSPSETESGKLGVVTSCSTS 303
S+L PS S L TS S
Sbjct: 136 SSLLDPSSVSSAILPSSTSVEVS 158
Score = 26.6 bits (56), Expect = 3.6
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = -1
Query: 533 SNLNSFCPALTVSPSLTYNSLMTPWPG-AMTGMAVLSVSISRTTSSAATLSPTFLSNLTS 357
S+L+S P + + S +S + P + T + S + +TSS+ S + +S+ +S
Sbjct: 162 SSLSSSDPLTSSTFSSLSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSS 221
Query: 356 PSETESGKLGVVTSCSTS 303
PS + S L +S STS
Sbjct: 222 PSSSSSSTL-TSSSLSTS 238
>SPCC1840.09 |||NAD dependent epimerase/dehydratase family
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 276
Score = 29.9 bits (64), Expect = 0.39
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = -1
Query: 536 ISNLNSFCPALTVSPSLTYNSLMTPWPGAMTGMAVLSVSISRTTSSA 396
ISNL S + + P YN P+ GA+ + +S SI+R TS A
Sbjct: 183 ISNLRS----IFLRPGFMYNFNDRPFTGALASLFTVSSSINRATSGA 225
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 29.9 bits (64), Expect = 0.39
Identities = 22/65 (33%), Positives = 34/65 (52%)
Frame = -1
Query: 539 VISNLNSFCPALTVSPSLTYNSLMTPWPGAMTGMAVLSVSISRTTSSAATLSPTFLSNLT 360
+ S ++S T S + S T P + T +++ S S S T SSA+T SP+ +S+
Sbjct: 560 ISSGISSSSIPSTFSSVSSILSSSTSSPSS-TSLSISSSSTSSTFSSASTSSPSSISSSI 618
Query: 359 SPSET 345
S S T
Sbjct: 619 SSSST 623
Score = 29.1 bits (62), Expect = 0.68
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Frame = -1
Query: 548 ASPVISNLNSFCPALTVSP-SLTYNSLMTPWPGAMTGMAVLSVSISRT-----TSSAATL 387
+S ++S ++ +T S SLT S + P ++ +++ S S T TSS+A +
Sbjct: 702 SSSLVSTYSASLSNITHSSLSLTAMSSSSAIPTSVNSSTLITASSSNTLLSSITSSSAIV 761
Query: 386 SPTFLSNLTS--PSETESGKLGVVTSCST 306
S T +SN++S PS T S + +T+ ST
Sbjct: 762 SSTTVSNISSNLPSATASSQ-SQLTNSST 789
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 29.9 bits (64), Expect = 0.39
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -1
Query: 521 SFCPALTVSPSLTYNSLMTPWPGAM--TGMAVLSVSISRTTSSAATLS 384
SF + V+ +L YN P P A+ G V +VS S TSS TL+
Sbjct: 4 SFILSTLVAGALAYNEFSAPGPNAVLQEGGGVNTVSWSNLTSSTVTLT 51
Score = 26.2 bits (55), Expect = 4.8
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -1
Query: 515 CPALTVSPS-LTYNSLMTPWPGAMTGMAVLSVSISRTTSSAATLSPTFLSNLTSPSETES 339
C T+S S L+Y+ ++ A + + + S TSS++T S + S+ +SPS + S
Sbjct: 111 CSTCTISTSSLSYSGTISSTSIAPSMIGTRTSSSYFITSSSSTPSSSSSSSSSSPSSSSS 170
Query: 338 GKLGVVTSCSTS 303
S S+S
Sbjct: 171 KSSSSSKSSSSS 182
>SPCC1259.07 |||transcriptional regulatory protein Rxt3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 351
Score = 29.1 bits (62), Expect = 0.68
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 207 QNTCTLTRNQTEPTESSGRPQSSSIHP 287
+NT ++ R +T PT+SSG ++ HP
Sbjct: 106 ENTSSVKRQKTLPTQSSGEEEAKYSHP 132
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 28.7 bits (61), Expect = 0.90
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +1
Query: 376 KVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKDGETVKAGQKL 522
+ G+ + A E E+E K +P++A GV+ +L + G ++ AG L
Sbjct: 727 ETGEHIKAGEAYAEVEVMKMIMPLVATEDGVV-QLIKQPGASLDAGDIL 774
>SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 867
Score = 27.5 bits (58), Expect = 2.1
Identities = 13/58 (22%), Positives = 27/58 (46%)
Frame = +3
Query: 102 VRSISENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSS 275
V ++ N+ L ++ +VP+ HP+ +N S + + + P +S Q+S
Sbjct: 349 VTTVPSNSPATLNSYTTSVPSGMSRHPMLMNPSTPEPSLGVNSPSLRPLQSLNNVQNS 406
>SPBC24C6.03 |||proline-tRNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 425
Score = 27.1 bits (57), Expect = 2.7
Identities = 21/79 (26%), Positives = 33/79 (41%)
Frame = +1
Query: 295 NPLLVEQDVTTPSFPDSVSEGDVKLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIK 474
N LL++ PS P + L +V + + +L I ++ H K
Sbjct: 28 NQLLIDMGFIQPSMPGIFQY--LPLGLRVQNKICD---LLHISMRSLGASAISLAHLSSK 82
Query: 475 ELYVKDGETVKAGQKLFRL 531
E++ K G K G +LFRL
Sbjct: 83 EIWEKSGRWQKTGSELFRL 101
>SPAC823.05c |tlg2||SNARE Tlg2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 301
Score = 27.1 bits (57), Expect = 2.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 440 MAVLSVSISRTTSSAATLSPTFLSNLTSPSETESGK 333
+ V + T S A ++ FLSNL S +TES +
Sbjct: 119 LQVTKAQTNSATGSEALMAKNFLSNLASRIQTESAQ 154
>SPCC737.03c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 615
Score = 26.2 bits (55), Expect = 4.8
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +3
Query: 105 RSISENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSSSIH 284
R+ E+ T L+ A+P S PV P+ QN+ ++ P E G + SIH
Sbjct: 417 RAPEESPMTFLQKKMAALPTSSPVRPMLKPTLQLQNS---PLSKLVPQE-VGNKVNDSIH 472
Query: 285 PLHESPA 305
P+
Sbjct: 473 TTSNQPS 479
>SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 394
Score = 25.8 bits (54), Expect = 6.3
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +1
Query: 241 NQPRALVAHNQVASIHFTNPLLVEQDVTTPSFPDSVSEGDVKLDKKVGDSVAADE 405
+QP L + + +++ QD+ P+FPDS E D VG S++ +E
Sbjct: 298 DQPACLAFACSLTHANSKRSIMLPQDID-PTFPDSEPEDDGHASSTVG-SLSKEE 350
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 25.8 bits (54), Expect = 6.3
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 134 ARSTSRRCTGVRASPSASSQQLKRPKYLHP-YTQPN 238
A +S T ASP+ +Q +P Y P Y+QP+
Sbjct: 71 AGGSSTGSTPRTASPAVGNQDYSKPSYSQPSYSQPS 106
>SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 987
Score = 25.8 bits (54), Expect = 6.3
Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +3
Query: 135 LEAHPDAVPASG-PVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSSSIH 284
++A ++P SG + P++ N+S++ + + N TESS RP SS ++
Sbjct: 145 MQASVHSLPLSGCSIGPVRTNHSSSLSNSS---NSLLQTESSLRPNSSFVN 192
>SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
3|||Manual
Length = 625
Score = 25.8 bits (54), Expect = 6.3
Identities = 21/77 (27%), Positives = 37/77 (48%)
Frame = -1
Query: 533 SNLNSFCPALTVSPSLTYNSLMTPWPGAMTGMAVLSVSISRTTSSAATLSPTFLSNLTSP 354
++L SF L + S Y+S +P ++ SV S TSS+ + S + S+ +
Sbjct: 488 ASLTSFGNFLGTATS--YSSASASYPSTSMSASLSSVHTSSATSSSKSSSSS--SSRSGS 543
Query: 353 SETESGKLGVVTSCSTS 303
S + S + G +S +S
Sbjct: 544 SSSSSSRSGSTSSSGSS 560
>SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 786
Score = 25.8 bits (54), Expect = 6.3
Identities = 17/64 (26%), Positives = 23/64 (35%)
Frame = +3
Query: 108 SISENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSSSIHP 287
S + N TT A P N++ Q+T TRN T S+G +
Sbjct: 143 STTANRTTSTPTTTTARTTRTTPRPTATTNTSNQSTSNSTRNGTSAATSNGTGTGAGTGA 202
Query: 288 LHES 299
H S
Sbjct: 203 SHRS 206
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 25.4 bits (53), Expect = 8.4
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +3
Query: 117 ENATTLLEAHPDA--VPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSSSIH 284
E AT+ LE ++ P P + +NS N T PT S+G P +S+H
Sbjct: 22 EAATSRLEDLVESGHKPLPNMHRPSRDSNSQTHNISFNIGTPTAPTVSTGSPAVASLH 79
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 25.4 bits (53), Expect = 8.4
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Frame = -1
Query: 422 SISRTTSSAAT-LSPTFLSNLTSPSETE--SGKLGVVTSCSTS 303
S S T+S+++T +S ++ S+ T PS++ S +GVV CS +
Sbjct: 208 SSSFTSSTSSTPISSSYSSSGTLPSKSNKSSNHVGVVVGCSVA 250
>SPAC1F5.05c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 151
Score = 25.4 bits (53), Expect = 8.4
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +3
Query: 165 SGPVHPLQVNNSN-AQNTCTLTRNQTEPTESSGRPQSSSIHPLHESPACRARCDHSKFPG 341
+GP P+ +N SN A + + P S S+S PL P+ + HS F
Sbjct: 58 TGPTSPVSINASNAAPSNLKASYIPANPRRLSSSTSSASSPPLRRLPSVQ----HSTFDD 113
Query: 342 L 344
L
Sbjct: 114 L 114
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,526,173
Number of Sequences: 5004
Number of extensions: 51067
Number of successful extensions: 195
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 194
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 343230174
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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