Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt20m18
(697 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical pr... 241 3e-64
U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical pr... 55 6e-08
Z81117-4|CAB03319.1| 249|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z81491-11|CAM84809.1| 226|Caenorhabditis elegans Hypothetical p... 29 4.2
Z19158-1|CAA79574.1| 788|Caenorhabditis elegans Hypothetical pr... 28 5.5
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ... 28 5.5
Z81035-10|CAB02733.2| 405|Caenorhabditis elegans Hypothetical p... 28 7.3
X70833-1|CAA50181.1| 575|Caenorhabditis elegans Cytoplasmic int... 28 7.3
U29379-3|AAF99979.3| 558|Caenorhabditis elegans Intermediate fi... 28 7.3
AC024849-3|AAK68547.1| 327|Caenorhabditis elegans Hypothetical ... 28 7.3
U53154-2|AAC25856.1| 358|Caenorhabditis elegans Hypothetical pr... 27 9.7
L29440-1|AAA98752.1| 570|Caenorhabditis elegans endoprotease pr... 27 9.7
L29439-1|AAA98751.1| 658|Caenorhabditis elegans endoprotease pr... 27 9.7
L29438-1|AAA98750.1| 684|Caenorhabditis elegans endoprotease pr... 27 9.7
AF039719-6|AAO12410.1| 666|Caenorhabditis elegans Blistered cut... 27 9.7
AF039719-5|AAB96755.1| 699|Caenorhabditis elegans Blistered cut... 27 9.7
AF039719-4|AAB96753.1| 670|Caenorhabditis elegans Blistered cut... 27 9.7
AF039719-3|AAB96756.1| 730|Caenorhabditis elegans Blistered cut... 27 9.7
AF039719-2|AAB96757.1| 827|Caenorhabditis elegans Blistered cut... 27 9.7
AF039719-1|AAB96754.1| 942|Caenorhabditis elegans Blistered cut... 27 9.7
>Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical
protein F25H2.10 protein.
Length = 312
Score = 241 bits (590), Expect = 3e-64
Identities = 107/162 (66%), Positives = 136/162 (83%)
Frame = +2
Query: 212 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 391
M RED++TWK+NYF K+++L +EYPKC +VG DNVGS+QMQ+IR ++RG + +LMGKNTM
Sbjct: 1 MVREDRSTWKANYFTKLVELFEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTM 60
Query: 392 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 571
+RKA++ HL NP+LEKLLPHI NVGFVFT+ DL E+R KLLEN+ APA+ GAIAP
Sbjct: 61 IRKALRGHLGKNPSLEKLLPHIVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPCD 120
Query: 572 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIXDVHILK 697
V +P NTG+GPEKTSFFQAL IPTKI++GTIEI+ DVH++K
Sbjct: 121 VKLPPQNTGMGPEKTSFFQALQIPTKIARGTIEILNDVHLIK 162
>U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical
protein F10E7.5 protein.
Length = 220
Score = 54.8 bits (126), Expect = 6e-08
Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 3/174 (1%)
Frame = +2
Query: 185 RSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS 364
R +L+++ ++ K T K+N ++ +D+Y FI N+ S + IR + +S
Sbjct: 6 RDKNVSLTKVKKKTKDT-KNNLVNEVRASVDQYKNLFIFTIANMRSTRFIAIRQKYKENS 64
Query: 365 IVLMGKNTMMRKAIKDHLDNNPA--LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQA 538
GKN ++ A+ + A L K +KG G +FT EV + E +
Sbjct: 65 RFFFGKNNVISIALGKQKSDEYANQLHKASAILKGQCGLMFTNMSKKEVEAEFSEASEED 124
Query: 539 PARPGAIAPLSVVIP-AHNTGLGPEKTSFFQALSIPTKISKGTIEIIXDVHILK 697
AR G +A +VV+P + + L +PTK+ KG I + + K
Sbjct: 125 YARVGDVATETVVLPEGPISQFAFSMEPQLRKLGLPTKLDKGVITLYQQFEVCK 178
>Z81117-4|CAB03319.1| 249|Caenorhabditis elegans Hypothetical
protein T06E6.10 protein.
Length = 249
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/56 (23%), Positives = 21/56 (37%)
Frame = +3
Query: 360 PVSCSWEKTQ*CAKPSKTTWTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRT 527
P C+ + C T ++P+ C H + T CSP + C+ T
Sbjct: 109 PAGCAMVRPSGCMDSPTMTGCELKPT--CIHVNACTTTKCSPGKKCALHTVQCFTT 162
>Z81491-11|CAM84809.1| 226|Caenorhabditis elegans Hypothetical
protein D1086.17 protein.
Length = 226
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Frame = -1
Query: 217 THPG*CGVGTSMKFKD*KRYRFYLKVCFD--PDYV--NHKIFVLGLHNTLNN-EYYLVNF 53
TH +G +K+ D K Y+ + CFD PD + NH I+V ++N + ++ + F
Sbjct: 156 THDNNLLIGV-IKYNDGKEYKHRMDNCFDAYPDSIISNHGIYVATINNKPDTIKWTRMYF 214
Query: 52 EFNHLNLHI 26
+ N + HI
Sbjct: 215 DPNGVGEHI 223
>Z19158-1|CAA79574.1| 788|Caenorhabditis elegans Hypothetical
protein T23G5.1 protein.
Length = 788
Score = 28.3 bits (60), Expect = 5.5
Identities = 34/158 (21%), Positives = 67/158 (42%), Gaps = 5/158 (3%)
Frame = +2
Query: 230 ATWKSNYFVKIIQLLDEYP---KCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRK 400
A W + F+K ++ E+ C G D+ ++ + + V + T+ +
Sbjct: 337 ALWIPDLFMKRVEKDQEWSLMCPCECPGLDDCWGEEFEALYAKYEAEGRV---RKTVKAR 393
Query: 401 AIKDHLDNNPALEKLLPHI--KGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSV 574
+ +H+ +N +E LP+I K + +L ++ L ++ + P IA ++
Sbjct: 394 KLWEHIVSNQ-IETGLPYITYKDAANRKSNQQNLGTIKCSNLCTEIIEYSAPDEIAVCNL 452
Query: 575 VIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIXDVH 688
A N + PEK F L+ TK+ + I DV+
Sbjct: 453 ASIALNRYVTPEKKFDFVKLAEVTKVITRNLNKIIDVN 490
>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
protein Y46B2A.3 protein.
Length = 1145
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 576 TTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPT 466
TT P AG WT+ +N ++R TR P +PT
Sbjct: 192 TTRGFTQRPTAAG-WTIRANGITRGQTRVPGTTREPT 227
>Z81035-10|CAB02733.2| 405|Caenorhabditis elegans Hypothetical
protein C15H11.6 protein.
Length = 405
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -1
Query: 148 LKVCFDPDYVNHKIFVLGLHNTLNNEYYLVN 56
+K PD ++++++ HN LN EY+ N
Sbjct: 261 IKFVMYPDSESYRMYLRTSHNVLNQEYFAAN 291
>X70833-1|CAA50181.1| 575|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 575
Score = 27.9 bits (59), Expect = 7.3
Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Frame = +2
Query: 167 SVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRI 346
S ++ RS Y +S R D +W Y +K+ ++ + + + N ++++++R
Sbjct: 279 SAIREIRSEYDHVSNTTRTDIESW---YKLKVQEIHTQNSRNCL--EQNYAREEVKRLRT 333
Query: 347 SL---RGSSIVLMGKNTMMRKAIKD 412
+L RG L G+N ++ K I+D
Sbjct: 334 TLGDMRGKMADLEGRNLLLEKQIED 358
>U29379-3|AAF99979.3| 558|Caenorhabditis elegans Intermediate
filament, a protein 4 protein.
Length = 558
Score = 27.9 bits (59), Expect = 7.3
Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Frame = +2
Query: 167 SVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRI 346
S ++ RS Y +S R D +W Y +K+ ++ + + + N ++++++R
Sbjct: 262 SAIREIRSEYDHVSNTTRTDIESW---YKLKVQEIHTQNSRNCL--EQNYAREEVKRLRT 316
Query: 347 SL---RGSSIVLMGKNTMMRKAIKD 412
+L RG L G+N ++ K I+D
Sbjct: 317 TLGDMRGKMADLEGRNLLLEKQIED 341
>AC024849-3|AAK68547.1| 327|Caenorhabditis elegans Hypothetical
protein Y67D8B.2 protein.
Length = 327
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 515 LLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 664
+L +Q A A+ L+ +P TGL P + FQAL P I+ T
Sbjct: 42 VLNRYMQLEAYCDAVDDLTGALP--KTGLAPNEPDLFQALFFPRSIAPRT 89
>U53154-2|AAC25856.1| 358|Caenorhabditis elegans Hypothetical
protein C33G8.12 protein.
Length = 358
Score = 27.5 bits (58), Expect = 9.7
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Frame = +2
Query: 107 YFVINVVRIKTYF*VKPVSFS---VLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLD 277
YF N+ +I K V+F+ + K S ++ +SR+ +EDK + SN+++K QLL
Sbjct: 138 YFDYNLTQI-----TKMVNFNTNLLWKLGESIFSDVSRLSKEDKNSMISNFYIK-WQLLM 191
Query: 278 E 280
E
Sbjct: 192 E 192
>L29440-1|AAA98752.1| 570|Caenorhabditis elegans endoprotease
protein.
Length = 570
Score = 27.5 bits (58), Expect = 9.7
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = +2
Query: 152 KPVSFSVLKFHRSPYATLSRMGREDKATW 238
+P F+ FH+ P+ ++ + G + + TW
Sbjct: 198 RPQDFNANGFHKWPFLSVQQWGEDPRGTW 226
>L29439-1|AAA98751.1| 658|Caenorhabditis elegans endoprotease
protein.
Length = 658
Score = 27.5 bits (58), Expect = 9.7
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = +2
Query: 152 KPVSFSVLKFHRSPYATLSRMGREDKATW 238
+P F+ FH+ P+ ++ + G + + TW
Sbjct: 571 RPQDFNANGFHKWPFLSVQQWGEDPRGTW 599
>L29438-1|AAA98750.1| 684|Caenorhabditis elegans endoprotease
protein.
Length = 684
Score = 27.5 bits (58), Expect = 9.7
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = +2
Query: 152 KPVSFSVLKFHRSPYATLSRMGREDKATW 238
+P F+ FH+ P+ ++ + G + + TW
Sbjct: 571 RPQDFNANGFHKWPFLSVQQWGEDPRGTW 599
>AF039719-6|AAO12410.1| 666|Caenorhabditis elegans Blistered
cuticle protein 4, isoformf protein.
Length = 666
Score = 27.5 bits (58), Expect = 9.7
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = +2
Query: 152 KPVSFSVLKFHRSPYATLSRMGREDKATW 238
+P F+ FH+ P+ ++ + G + + TW
Sbjct: 571 RPQDFNANGFHKWPFLSVQQWGEDPRGTW 599
>AF039719-5|AAB96755.1| 699|Caenorhabditis elegans Blistered
cuticle protein 4, isoforme protein.
Length = 699
Score = 27.5 bits (58), Expect = 9.7
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = +2
Query: 152 KPVSFSVLKFHRSPYATLSRMGREDKATW 238
+P F+ FH+ P+ ++ + G + + TW
Sbjct: 571 RPQDFNANGFHKWPFLSVQQWGEDPRGTW 599
>AF039719-4|AAB96753.1| 670|Caenorhabditis elegans Blistered
cuticle protein 4, isoforma protein.
Length = 670
Score = 27.5 bits (58), Expect = 9.7
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = +2
Query: 152 KPVSFSVLKFHRSPYATLSRMGREDKATW 238
+P F+ FH+ P+ ++ + G + + TW
Sbjct: 571 RPQDFNANGFHKWPFLSVQQWGEDPRGTW 599
>AF039719-3|AAB96756.1| 730|Caenorhabditis elegans Blistered
cuticle protein 4, isoformb protein.
Length = 730
Score = 27.5 bits (58), Expect = 9.7
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = +2
Query: 152 KPVSFSVLKFHRSPYATLSRMGREDKATW 238
+P F+ FH+ P+ ++ + G + + TW
Sbjct: 571 RPQDFNANGFHKWPFLSVQQWGEDPRGTW 599
>AF039719-2|AAB96757.1| 827|Caenorhabditis elegans Blistered
cuticle protein 4, isoformc protein.
Length = 827
Score = 27.5 bits (58), Expect = 9.7
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = +2
Query: 152 KPVSFSVLKFHRSPYATLSRMGREDKATW 238
+P F+ FH+ P+ ++ + G + + TW
Sbjct: 571 RPQDFNANGFHKWPFLSVQQWGEDPRGTW 599
>AF039719-1|AAB96754.1| 942|Caenorhabditis elegans Blistered
cuticle protein 4, isoformd protein.
Length = 942
Score = 27.5 bits (58), Expect = 9.7
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = +2
Query: 152 KPVSFSVLKFHRSPYATLSRMGREDKATW 238
+P F+ FH+ P+ ++ + G + + TW
Sbjct: 571 RPQDFNANGFHKWPFLSVQQWGEDPRGTW 599
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,279,482
Number of Sequences: 27780
Number of extensions: 355814
Number of successful extensions: 1021
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1020
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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