Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt20m15
         (493 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC002931-1|AAH02931.1|  744|Homo sapiens CCR4-NOT transcription ...    30   5.0  
AK027026-1|BAB15629.1|  451|Homo sapiens protein ( Homo sapiens ...    30   5.0  
AK023227-1|BAB14478.1|  744|Homo sapiens protein ( Homo sapiens ...    30   5.0  
AK022952-1|BAB14327.1|  744|Homo sapiens protein ( Homo sapiens ...    30   5.0  
AK022576-1|BAB14108.1|  743|Homo sapiens protein ( Homo sapiens ...    29   6.6  

>BC002931-1|AAH02931.1|  744|Homo sapiens CCR4-NOT transcription
           complex, subunit 10 protein.
          Length = 744

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = +2

Query: 119 ESAQMCENKTKPLDIASRNPPKSPLKRSQ---YMITILLRLTYICWSLNINVMAGN 277
           ES++ C +K+   D     PP SPL++ +      +IL    Y+  +L  N+MA N
Sbjct: 499 ESSETCSSKSHDGDKFIPAPPSSPLRKQELENLKCSILACSAYVALALGDNLMALN 554


>AK027026-1|BAB15629.1|  451|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23373 fis, clone HEP16118. ).
          Length = 451

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = +2

Query: 119 ESAQMCENKTKPLDIASRNPPKSPLKRSQ---YMITILLRLTYICWSLNINVMAGN 277
           ES++ C +K+   D     PP SPL++ +      +IL    Y+  +L  N+MA N
Sbjct: 206 ESSETCSSKSHDGDKFIPAPPSSPLRKQELENLKCSILACSAYVALALGDNLMALN 261


>AK023227-1|BAB14478.1|  744|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13165 fis, clone NT2RP3003686. ).
          Length = 744

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = +2

Query: 119 ESAQMCENKTKPLDIASRNPPKSPLKRSQ---YMITILLRLTYICWSLNINVMAGN 277
           ES++ C +K+   D     PP SPL++ +      +IL    Y+  +L  N+MA N
Sbjct: 499 ESSETCSSKSHDGDKFIPAPPSSPLRKQELENLKCSILACSAYVALALGDNLMALN 554


>AK022952-1|BAB14327.1|  744|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12890 fis, clone NT2RP2004124. ).
          Length = 744

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = +2

Query: 119 ESAQMCENKTKPLDIASRNPPKSPLKRSQ---YMITILLRLTYICWSLNINVMAGN 277
           ES++ C +K+   D     PP SPL++ +      +IL    Y+  +L  N+MA N
Sbjct: 499 ESSETCSSKSHDGDKFIPAPPSSPLRKQELENLKCSILACSAYVALALGDNLMALN 554


>AK022576-1|BAB14108.1|  743|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12514 fis, clone NT2RM2001768. ).
          Length = 743

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = +2

Query: 119 ESAQMCENKTKPLDIASRNPPKSPLKRSQ---YMITILLRLTYICWSLNINVMAGN 277
           ES++ C +K+   D     PP SPL++ +      +IL    Y+  +L  N+MA N
Sbjct: 498 ESSETCSSKSYDGDKFIPAPPSSPLRKQELENLKCSILACSAYVALALGDNLMALN 553


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,770,946
Number of Sequences: 237096
Number of extensions: 1233240
Number of successful extensions: 1594
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1594
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)