Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt20m02
(670 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0255 + 19462668-19462695,19463443-19464491 224 4e-59
01_06_1721 - 39426957-39428005,39428812-39428839 224 6e-59
08_01_0142 - 1121762-1122822,1123087-1123114 214 5e-56
06_03_0718 + 23840198-23840409,23841368-23841518,23842190-238422... 213 1e-55
11_01_0448 - 3469398-3469676,3470015-3470284,3470386-3470476,347... 195 2e-50
12_01_0448 + 3537661-3538018,3538920-3539047,3539740-3539763,354... 79 2e-15
12_02_0398 - 18586985-18587480,18587669-18587687,18588317-185885... 33 0.27
07_03_1705 + 28848293-28848321,28848766-28848841,28848940-288490... 32 0.48
06_01_0093 - 776567-777335,777449-777747 32 0.48
05_02_0156 + 7163756-7163834,7165447-7166225 32 0.48
03_05_1085 + 30275567-30276178,30277024-30278680,30278835-30278968 32 0.48
06_03_0828 + 25137782-25138312,25141349-25141588 31 0.63
07_01_1073 + 9566727-9566963,9566992-9567180 31 1.1
04_01_0610 - 7997406-7998047,7998379-7998426,8000719-8001143,800... 30 1.5
05_02_0152 + 7126802-7127315,7127451-7129190,7130718-7131778 30 1.9
01_01_0516 + 3778891-3779069,3779436-3779541,3780526-3780888 30 1.9
09_02_0028 + 3109502-3110232,3110274-3110727 29 2.5
12_02_0167 - 14824241-14824279,14824385-14824423,14824509-148247... 29 3.3
08_02_0574 - 18867623-18868033,18869751-18870209 29 3.3
02_05_1121 + 34262019-34262040,34262144-34262211,34262909-342630... 29 3.3
06_01_1052 + 8312752-8312862,8312969-8313041,8313285-8313362,831... 29 4.4
05_04_0303 - 20010761-20011756 29 4.4
10_06_0002 + 9382559-9382937,9383008-9383180,9386752-9386901,938... 28 5.9
04_04_0920 + 29429114-29430934 28 5.9
03_02_0367 + 7834072-7834479,7834555-7834779,7834858-7835082,783... 28 5.9
03_02_0119 - 5725588-5726688,5726793-5726894 28 5.9
02_05_0466 + 29278009-29278575 28 5.9
06_02_0240 + 13397512-13397856 28 7.7
05_04_0173 + 18724367-18724476,18724570-18724651,18724750-187248... 28 7.7
03_02_0983 - 12933082-12934884,12935669-12936487,12936754-129367... 28 7.7
02_03_0223 + 16570264-16570357,16570470-16570552,16570974-165710... 28 7.7
02_01_0210 + 1402037-1402066,1402449-1402544,1402611-1403033,140... 28 7.7
>05_04_0255 + 19462668-19462695,19463443-19464491
Length = 358
Score = 224 bits (548), Expect = 4e-59
Identities = 112/185 (60%), Positives = 132/185 (71%)
Frame = +3
Query: 114 QEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSE 293
++EL K A I P KGILAADESTGT+GKR I VEN EENRR R+LLF + L +
Sbjct: 9 KDELIKNAAYIGTPGKGILAADESTGTIGKRFASINVENVEENRRSLRELLFCTPGAL-Q 67
Query: 294 NISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLA 473
+SGVILF ETLYQK DG P V +L++ G++PGIKVDKG + + G+E E TTQG DDL
Sbjct: 68 YLSGVILFEETLYQKTKDGKPFVDVLKEGGVLPGIKVDKGTIEVAGTEKETTTQGHDDLG 127
Query: 474 QRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVEPEVL 653
+RCA+Y + G FAKWR VLKIG N PS AI NA LARYA ICQ +VPIVEPE+L
Sbjct: 128 KRCAKYYEAGARFAKWRAVLKIGPNEPSQLAIDLNAQGLARYAIICQENGLVPIVEPEIL 187
Query: 654 PDGEH 668
DG H
Sbjct: 188 VDGPH 192
>01_06_1721 - 39426957-39428005,39428812-39428839
Length = 358
Score = 224 bits (547), Expect = 6e-59
Identities = 111/185 (60%), Positives = 133/185 (71%)
Frame = +3
Query: 114 QEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSE 293
++EL K A I P KGILAADESTGT+GKR I VEN EENRR R+LLF++ L +
Sbjct: 9 KDELIKNAAYIGTPGKGILAADESTGTIGKRFASINVENVEENRRSLRELLFTTPGAL-Q 67
Query: 294 NISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLA 473
++SGVILF ETLYQK DG P V +L++ G++PGIKVDKG V + G+ E TTQG DDL
Sbjct: 68 HLSGVILFEETLYQKTKDGKPFVDVLKEGGVLPGIKVDKGTVEVAGTNKETTTQGHDDLG 127
Query: 474 QRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVEPEVL 653
+RCA+Y + G FAKWR VLKIG N PS +I NA LARYA ICQ +VPIVEPE+L
Sbjct: 128 KRCAKYYEAGARFAKWRAVLKIGPNEPSQLSIDLNAQGLARYAIICQENGLVPIVEPEIL 187
Query: 654 PDGEH 668
DG H
Sbjct: 188 VDGSH 192
>08_01_0142 - 1121762-1122822,1123087-1123114
Length = 362
Score = 214 bits (523), Expect = 5e-56
Identities = 110/187 (58%), Positives = 130/187 (69%), Gaps = 2/187 (1%)
Frame = +3
Query: 114 QEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSE 293
++EL + A I P KGILAADESTGT+GKRL IGVEN EENRR R+LLF++ L +
Sbjct: 9 KDELIRNAAYIGTPGKGILAADESTGTIGKRLASIGVENVEENRRALRELLFTAPGAL-D 67
Query: 294 NISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLA 473
+SGVILF ETLYQ DGTP V +L G++ GIKVDKG V L G++ E TTQG D L
Sbjct: 68 CLSGVILFEETLYQSTRDGTPFVDVLAAAGVLAGIKVDKGTVELAGTDRETTTQGHDGLG 127
Query: 474 QRCAQYKKDGCHFAKWRCVLKIGR--NTPSYQAIQENANVLARYASICQSQRIVPIVEPE 647
+RC +Y G FAKWR VL IGR + PS A+ NA LARYA ICQ +VPIVEPE
Sbjct: 128 ERCRRYYAAGARFAKWRAVLSIGRASSRPSQLAVDANAQGLARYAIICQENGLVPIVEPE 187
Query: 648 VLPDGEH 668
+L DGEH
Sbjct: 188 ILVDGEH 194
>06_03_0718 +
23840198-23840409,23841368-23841518,23842190-23842294,
23843476-23843608,23844164-23844849,23844937-23845299
Length = 549
Score = 213 bits (520), Expect = 1e-55
Identities = 107/184 (58%), Positives = 128/184 (69%), Gaps = 1/184 (0%)
Frame = +3
Query: 120 ELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSENI 299
EL K A+ I P KGILAADESTGT+GKRL I VEN E NR+ R+LLF++ + +
Sbjct: 202 ELIKTAKYIATPGKGILAADESTGTIGKRLASINVENVEPNRQALRELLFTTPGAF-QYL 260
Query: 300 SGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQR 479
SGVILF ETLYQ GTP V +L+ G++PGIKVDKG V + G+ E TTQGLD L R
Sbjct: 261 SGVILFEETLYQSTAAGTPFVDVLKAGGVVPGIKVDKGTVDIAGTNGETTTQGLDSLGAR 320
Query: 480 CAQYKKDGCHFAKWRCVLKIG-RNTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLP 656
CA+Y + G FAKWR VLKIG PS A+++NA LARYA ICQ +VPIVEPE+L
Sbjct: 321 CAKYYEAGARFAKWRAVLKIGAAGEPSELAVKQNAEGLARYALICQENGLVPIVEPEILT 380
Query: 657 DGEH 668
DG H
Sbjct: 381 DGAH 384
>11_01_0448 -
3469398-3469676,3470015-3470284,3470386-3470476,
3470581-3470690,3470867-3471136,3471768-3471914
Length = 388
Score = 195 bits (476), Expect = 2e-50
Identities = 103/184 (55%), Positives = 126/184 (68%)
Frame = +3
Query: 117 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSEN 296
+EL K A+ I +P +GILA DES T GKRL IG+ENTE NR+ YR LL ++ L +
Sbjct: 43 DELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQY 101
Query: 297 ISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQ 476
ISG ILF ETLYQ DG +V +L ++ I+PGIKVDKG+VPL GS +E QGLD LA
Sbjct: 102 ISGAILFEETLYQSTVDGKKIVDILTEQKIVPGIKVDKGLVPLAGSNNESWCQGLDGLAS 161
Query: 477 RCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLP 656
R A Y + G FAKWR V+ I N PS A++E A LARYA+I Q +VPIVEPE+L
Sbjct: 162 REAAYYQQGARFAKWRTVVSI-PNGPSELAVKEAAWGLARYAAISQDNGLVPIVEPEILL 220
Query: 657 DGEH 668
DGEH
Sbjct: 221 DGEH 224
>12_01_0448 +
3537661-3538018,3538920-3539047,3539740-3539763,
3542051-3542317,3542994-3543530
Length = 437
Score = 79.4 bits (187), Expect = 2e-15
Identities = 42/89 (47%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Frame = +3
Query: 198 GKRLQDIGVE-NTEENRRRYRQLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLE 374
G+ +D+ E + NR+ YR LL ++ L + ISG ILF ETLYQ DG +V +L
Sbjct: 176 GRVERDVREEAGVDRNRQAYRTLLVTAPG-LGQYISGAILFEETLYQSTVDGRRIVDVLA 234
Query: 375 KKGIIPGIKVDKGVVPLFGSEDECTTQGL 461
++GI+PGI VDKG+VPL GS+ E GL
Sbjct: 235 EQGIVPGINVDKGLVPLAGSDPESLEDGL 263
Score = 31.1 bits (67), Expect = 0.83
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3
Query: 624 IVPIVEPEVLPDGEH 668
+VPIVEPE+L DGEH
Sbjct: 263 LVPIVEPEILLDGEH 277
>12_02_0398 -
18586985-18587480,18587669-18587687,18588317-18588544,
18589699-18589966
Length = 336
Score = 32.7 bits (71), Expect = 0.27
Identities = 24/73 (32%), Positives = 31/73 (42%)
Frame = -2
Query: 669 RARHQVRLRARQLARCVGSDRWRRSGREHWRFPG*LGTRGCCGQSSARNATWRSGSRPSC 490
R H+ R R + R G RR GR FP R G+ + +A G+ C
Sbjct: 31 RPVHRGRGRGGRRRRSGGDATGRRRGRVSGDFPA--KRRADRGRGGSCDAGRGGGAAGGC 88
Query: 489 TGRSAGRGRPDPG 451
TGR + RP PG
Sbjct: 89 TGRDSDFTRPPPG 101
>07_03_1705 +
28848293-28848321,28848766-28848841,28848940-28849082,
28849297-28849383,28849492-28849575,28850224-28850380,
28850521-28850606,28850995-28851226,28851351-28851471,
28851610-28851746,28852086-28852202,28852612-28852660,
28852751-28852793,28852945-28853116,28853192-28853262,
28853365-28853458,28853608-28853820,28853851-28853859,
28853895-28853999,28854266-28854586,28854664-28854789
Length = 823
Score = 31.9 bits (69), Expect = 0.48
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 393 GIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCH 509
G+ ++ V GS+ EC + LD+L YKK+GC+
Sbjct: 782 GVSLEDVVKHFNGSKRECVVEMLDNLEGNFLVYKKNGCY 820
>06_01_0093 - 776567-777335,777449-777747
Length = 355
Score = 31.9 bits (69), Expect = 0.48
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -1
Query: 457 PWVVHSSSDPNSGTTPLSTLMPGMM 383
P+ HSSSDP S + PL +L+P M+
Sbjct: 67 PYSHHSSSDPMSASNPLVSLLPAMV 91
>05_02_0156 + 7163756-7163834,7165447-7166225
Length = 285
Score = 31.9 bits (69), Expect = 0.48
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 386 HPRHQGRQGCRPAVRIGRRM-HHPGSGRPRPALRPVQEGRLPLRQ 517
HPRH+ R+ P R R + H G P PALRP RLP R+
Sbjct: 96 HPRHRRRRAAPPRPRRLRPVGHRKAPGDPLPALRP---RRLPGRR 137
>03_05_1085 + 30275567-30276178,30277024-30278680,30278835-30278968
Length = 800
Score = 31.9 bits (69), Expect = 0.48
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +3
Query: 201 KRLQDIGVENTEENRRRYRQLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKK 380
+R Q I V N+ + + +L+ + + V + +I+ TL+Q + DG P+ LL+
Sbjct: 582 RRSQFIDVFNSSPDETAFFRLMLNREGV----VGSLIMIQPTLFQYSFDGPPIPVLLDVS 637
Query: 381 GIIPGI 398
I P +
Sbjct: 638 SISPDV 643
>06_03_0828 + 25137782-25138312,25141349-25141588
Length = 256
Score = 31.5 bits (68), Expect = 0.63
Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = -2
Query: 642 ARQLARCVGSDRWRRSGREHWRFPG*LGTRGCCGQSSARNATWRSGSRPSCTGRSAGR-- 469
A + A S WRR+ W G G R G +A A G R + +G GR
Sbjct: 117 AARSAASTHSTPWRRTTGGRWARGG--GGRLEAGGGAAEEAG--GGERAAVSGEQRGRRR 172
Query: 468 GRPDPGW 448
GRPDP W
Sbjct: 173 GRPDPIW 179
>07_01_1073 + 9566727-9566963,9566992-9567180
Length = 141
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -2
Query: 561 GTRGCCGQSSARNATWRSGSRPSCTGRSAGRGRP 460
GT CG S + TW GSR R RG P
Sbjct: 78 GTSDGCGSGSGEDGTWSGGSREDGQRRCRCRGSP 111
>04_01_0610 -
7997406-7998047,7998379-7998426,8000719-8001143,
8002301-8002589
Length = 467
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = +2
Query: 389 PRHQGRQGCRPAVRIGRRMHHPGSGRPR---PALRPVQEG 499
PRH R CRP R H P RPR P RP + G
Sbjct: 402 PRHPPRPWCRPHTPRPRSPHSPTHPRPRLHHPLPRPTRTG 441
>05_02_0152 + 7126802-7127315,7127451-7129190,7130718-7131778
Length = 1104
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +2
Query: 353 PSGLPAGEEGHHPRHQGRQGCRPAVRIGRRMHHPGSGRPRPA 478
P+G PAG H P G +GC GR H G +PA
Sbjct: 915 PAGWPAGRR-HGPGEGGDRGCSRRWLRGRETHGDGGDSGQPA 955
>01_01_0516 + 3778891-3779069,3779436-3779541,3780526-3780888
Length = 215
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = -1
Query: 214 SCKRLPIVPVDSSAARIPFAG 152
+C +LP+VP+D++AA FAG
Sbjct: 142 TCDKLPVVPLDAAAAHSIFAG 162
>09_02_0028 + 3109502-3110232,3110274-3110727
Length = 394
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +2
Query: 395 HQGRQGCRPAVRIGRRMHHPGSGRPRPALRPVQEGRLPLRQVALRAEDW 541
H G G R AV G + H G RPA+ VQ+G P R + W
Sbjct: 245 HHGVDGHRGAVSGGVVVLHRRLGGARPAVPRVQQGTKPSALGPQRQQQW 293
>12_02_0167 -
14824241-14824279,14824385-14824423,14824509-14824797,
14824898-14824991,14825129-14825639,14825751-14826014,
14826103-14826549,14826628-14826801,14827003-14827323
Length = 725
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +3
Query: 330 YQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKK 497
YQK DDGT + E +G+ IK + V S++ C+ + DDL + K+
Sbjct: 143 YQKNDDGTIFMPNAEDQGLYEAIK--ELVAEQQASQEACSQRREDDLPTKALGNKE 196
>08_02_0574 - 18867623-18868033,18869751-18870209
Length = 289
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -2
Query: 549 CCGQSSARNATWRSGSR--PSCTGRSAGRGRP 460
C G S+ +A + +R P+CTGRS+ G P
Sbjct: 90 CAGSSTTASAPTSTSTRAAPACTGRSSSTGLP 121
>02_05_1121 +
34262019-34262040,34262144-34262211,34262909-34263067,
34263146-34263313,34264125-34264278,34264845-34264924,
34265567-34265839,34265956-34266099,34266750-34266884,
34266994-34267092,34267530-34267586,34267673-34267877,
34268159-34268277,34268779-34268877,34268964-34269203
Length = 673
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +3
Query: 165 ILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSENISGVILFHETLYQKA 341
ILA++E++ GK+ +D +++ + LL +LSE +S + H L QKA
Sbjct: 515 ILASNENSRRKGKKKKDHSKDSSRDTAFPSSCLLLQCYVLLSEGLSMRFIQHFDLLQKA 573
>06_01_1052 +
8312752-8312862,8312969-8313041,8313285-8313362,
8313443-8313523,8313706-8313779,8313865-8313919,
8314031-8314079,8314222-8314359,8314455-8314536,
8315131-8315209,8315357-8315400,8315479-8315673,
8316110-8316185,8317427-8317507,8317623-8317703,
8318128-8318204,8318402-8318499,8318672-8318809,
8319397-8319478,8319564-8319642,8319885-8319931,
8320014-8320228,8320330-8320450,8320529-8320648,
8320731-8320849,8320964-8321036,8321112-8321231,
8321538-8321606,8321756-8321926,8322004-8322051,
8322192-8322333,8323244-8323341,8323684-8323828,
8323928-8324013,8324112-8324222,8324456-8324530,
8324836-8324901,8325036-8325224,8325315-8325425,
8326616-8326696,8327192-8327371
Length = 1385
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = -1
Query: 208 KRLPIVPVDSSAARIPFAGATIA*AIFLSSSCS 110
K L IV +SS ARIP ++IA +FLS S S
Sbjct: 562 KDLGIVSHESSNARIPLHVSSIAHQLFLSGSAS 594
>05_04_0303 - 20010761-20011756
Length = 331
Score = 28.7 bits (61), Expect = 4.4
Identities = 24/65 (36%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Frame = +2
Query: 284 ALREHLWCD-PVPRDP---LPEG*RWNPSGLPAGEEGHHPRHQGRQGCRPAVR-IGRRMH 448
A EHL+ PVP P P G P P G HHP G PA R +G
Sbjct: 197 AATEHLFATGPVPFLPPGRAPAGGDPYPPFAPMGGHHHHPPQIGHFHHHPAARPLGHYGS 256
Query: 449 HPGSG 463
PG+G
Sbjct: 257 GPGAG 261
>10_06_0002 +
9382559-9382937,9383008-9383180,9386752-9386901,
9387180-9387325,9387416-9387572,9387720-9387778,
9388204-9388360,9389001-9389150,9389280-9389416,
9390071-9390217,9390292-9390393,9390742-9390799,
9391997-9392034,9392124-9392250,9392320-9392493,
9393125-9393256,9393940-9394049,9394752-9394812,
9395036-9395213,9395326-9395531,9395796-9395915,
9396496-9396594,9396983-9397204,9397482-9397621,
9397741-9397852,9398021-9398071,9398151-9398240,
9398397-9398567,9398663-9398815,9399774-9399950,
9400045-9400182,9400295-9400365,9400739-9400838,
9401324-9401380,9401469-9401525,9401619-9401699,
9401782-9401864,9401975-9402110
Length = 1632
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 534 SARNATWRSGSRPSCTGRSAGRGRPDPGW 448
+A++A WR G RP+ T GR + + W
Sbjct: 27 TAKDARWRGGQRPAATPADEGRSQ-EAAW 54
>04_04_0920 + 29429114-29430934
Length = 606
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 543 RNTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEH 668
R TPS ++ LA + C P++EP+ LPD H
Sbjct: 18 RRTPSQTSLWTIRRQLASFVLHCSRSCASPLLEPKNLPDEFH 59
>03_02_0367 +
7834072-7834479,7834555-7834779,7834858-7835082,
7835333-7836219,7836298-7836468,7836551-7836839,
7836925-7836963,7837069-7837107
Length = 760
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +3
Query: 324 TLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKK 497
T YQK DDGT ++ E + + IK + V S++ C+ + DDL + K+
Sbjct: 187 TRYQKKDDGTIIMPNPEDQRVYEAIK--ELVADQQASQEACSQRREDDLLMKALGNKE 242
>03_02_0119 - 5725588-5726688,5726793-5726894
Length = 400
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 519 TWRSGSRPSCTGRSAGRGRPDPGWCIRL 436
T + ++P TG G GRP PG C+ L
Sbjct: 364 TTTTPAKPPLTGPRGGDGRPLPGGCLTL 391
>02_05_0466 + 29278009-29278575
Length = 188
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 377 EGHHPRHQGRQGCRPAVRIGRRMHHPGSGRPRP 475
+GH +HQ Q + G HHP G P P
Sbjct: 129 KGHQQQHQQHQHQHHPQQHGMPQHHPQHGMPMP 161
>06_02_0240 + 13397512-13397856
Length = 114
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +2
Query: 158 KGYPGR*RIHRYNGQAFA---GHRRGEHRGEPSSL 253
+G PG R+HR+ +A + HR EHR PS L
Sbjct: 23 RGLPGTRRLHRHTLEAMSLRRCHRTVEHRTTPSLL 57
>05_04_0173 +
18724367-18724476,18724570-18724651,18724750-18724840,
18725060-18725172,18725270-18725342,18725445-18725565,
18725665-18725782,18726609-18726748,18726824-18726881,
18727007-18727077,18727181-18727733
Length = 509
Score = 27.9 bits (59), Expect = 7.7
Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Frame = +2
Query: 293 EHLWCDPVPRDPLPEG*RWNPSGLPAGEEGHH-PRHQGRQGCRPAVRIGRRM--HHPGSG 463
E+ W DP+P D P LP E H + RQ R A +R HP
Sbjct: 313 EYFWSDPLPCD---------PKSLPKYESSHEFQTKKKRQQMRQADEAAKRQKTQHP--- 360
Query: 464 RPRPALRPVQEGRLPLRQV 520
+P L P+Q+ P Q+
Sbjct: 361 QPHGRLPPIQQTGQPHPQI 379
>03_02_0983 -
12933082-12934884,12935669-12936487,12936754-12936795,
12937116-12937244
Length = 930
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -1
Query: 514 AKWQPSFLYWAQRWARS-SRPWVVHSSSDPNSGTTPLSTLMPGMMPFFSSRETRG 353
+K + + L+W W R +R W +D ++ L ++PG+ F S T+G
Sbjct: 416 SKTRSNDLFWEAVWPRLLARGWHSEKPNDVSTTKNCLVFIVPGIQRFSRSELTKG 470
>02_03_0223 +
16570264-16570357,16570470-16570552,16570974-16571032,
16571607-16571665,16572276-16572325,16573575-16573612,
16574619-16574695,16575593-16576503
Length = 456
Score = 27.9 bits (59), Expect = 7.7
Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = -2
Query: 651 RLRARQLARCVGSDRWRRSGREHWRFPG*LGTRGCCGQSSARN-ATWRSGSRPSCTGRSA 475
R R R+ G +RSG + WR G G R+ A WRSGS S G +A
Sbjct: 387 RARRRRRRSSGGGSVRKRSGAQ-WRSGSARRRSGGGGSVRKRSCAQWRSGSARSGGGGAA 445
Query: 474 GRG 466
RG
Sbjct: 446 RRG 448
>02_01_0210 +
1402037-1402066,1402449-1402544,1402611-1403033,
1403126-1403215,1403330-1403401,1403851-1403980,
1404172-1404269
Length = 312
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +2
Query: 533 EDWPQHPLVPSYPGKRQCSRPLRLHLSEPTHRANCR 640
E +PQ P VPS P R LRL P ++ R
Sbjct: 10 EKYPQMPHVPSEPSNPTIGRSLRLRRISPPYQLIAR 45
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,382,534
Number of Sequences: 37544
Number of extensions: 535144
Number of successful extensions: 2055
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2044
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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