Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt20l24
         (702 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051817-1|AAK93241.1|  491|Drosophila melanogaster LD32366p pro...   169   4e-42
AE014134-1743|AAF52840.2|  491|Drosophila melanogaster CG5850-PA...   169   4e-42
AE014134-1742|ABI31304.1|  569|Drosophila melanogaster CG5850-PB...   169   4e-42
BT029687-1|ABL75744.1|  486|Drosophila melanogaster IP17403p pro...    68   1e-11
AY052085-1|AAK93509.1|  403|Drosophila melanogaster SD03655p pro...    68   1e-11
AE014296-291|AAN11491.1|  403|Drosophila melanogaster CG12004-PB...    68   1e-11
AE014296-290|AAF47516.2|  403|Drosophila melanogaster CG12004-PA...    68   1e-11
AY060768-1|AAL28316.1|  158|Drosophila melanogaster GH23035p pro...    29   8.1  
AE014296-2015|AAF50021.1|  158|Drosophila melanogaster CG6038-PA...    29   8.1  

>AY051817-1|AAK93241.1|  491|Drosophila melanogaster LD32366p
           protein.
          Length = 491

 Score =  169 bits (410), Expect = 4e-42
 Identities = 79/141 (56%), Positives = 91/141 (64%)
 Frame = +2

Query: 278 MCSNAVISFFSQWRLWIRPXXXXXXXXXXXXXXXXXXXXXXNNGFKKSDQXXXXXXXXXX 457
           MCS  V  FF +WR+WIRP                       +GF+++DQ          
Sbjct: 1   MCSLDVRRFFEEWRIWIRPLLIITYVIFAIIVVPLLIVNSVKDGFQRNDQLILIGGLFVL 60

Query: 458 XXXPISIWQITQHIVHYTKPSLQKHIIRILWMVPIYALNALIGLEFPEQSIYLDSLRECY 637
              P+SIW I QH++H+TKP LQKHIIRILWMVPIYALNA IGL FP+ SIY+DSLRECY
Sbjct: 61  SAVPVSIWHIIQHVIHFTKPILQKHIIRILWMVPIYALNAWIGLFFPKHSIYVDSLRECY 120

Query: 638 EAYVIYNFMKYLLNYLNDGHD 700
           EAYVIYNFM YLLNYLN G D
Sbjct: 121 EAYVIYNFMVYLLNYLNLGMD 141


>AE014134-1743|AAF52840.2|  491|Drosophila melanogaster CG5850-PA,
           isoform A protein.
          Length = 491

 Score =  169 bits (410), Expect = 4e-42
 Identities = 79/141 (56%), Positives = 91/141 (64%)
 Frame = +2

Query: 278 MCSNAVISFFSQWRLWIRPXXXXXXXXXXXXXXXXXXXXXXNNGFKKSDQXXXXXXXXXX 457
           MCS  V  FF +WR+WIRP                       +GF+++DQ          
Sbjct: 1   MCSLDVRRFFEEWRIWIRPLLIITYVIFAIIVVPLLIVNSVKDGFQRNDQLILIGGLFVL 60

Query: 458 XXXPISIWQITQHIVHYTKPSLQKHIIRILWMVPIYALNALIGLEFPEQSIYLDSLRECY 637
              P+SIW I QH++H+TKP LQKHIIRILWMVPIYALNA IGL FP+ SIY+DSLRECY
Sbjct: 61  SAVPVSIWHIIQHVIHFTKPILQKHIIRILWMVPIYALNAWIGLFFPKHSIYVDSLRECY 120

Query: 638 EAYVIYNFMKYLLNYLNDGHD 700
           EAYVIYNFM YLLNYLN G D
Sbjct: 121 EAYVIYNFMVYLLNYLNLGMD 141


>AE014134-1742|ABI31304.1|  569|Drosophila melanogaster CG5850-PB,
           isoform B protein.
          Length = 569

 Score =  169 bits (410), Expect = 4e-42
 Identities = 79/141 (56%), Positives = 91/141 (64%)
 Frame = +2

Query: 278 MCSNAVISFFSQWRLWIRPXXXXXXXXXXXXXXXXXXXXXXNNGFKKSDQXXXXXXXXXX 457
           MCS  V  FF +WR+WIRP                       +GF+++DQ          
Sbjct: 1   MCSLDVRRFFEEWRIWIRPLLIITYVIFAIIVVPLLIVNSVKDGFQRNDQLILIGGLFVL 60

Query: 458 XXXPISIWQITQHIVHYTKPSLQKHIIRILWMVPIYALNALIGLEFPEQSIYLDSLRECY 637
              P+SIW I QH++H+TKP LQKHIIRILWMVPIYALNA IGL FP+ SIY+DSLRECY
Sbjct: 61  SAVPVSIWHIIQHVIHFTKPILQKHIIRILWMVPIYALNAWIGLFFPKHSIYVDSLRECY 120

Query: 638 EAYVIYNFMKYLLNYLNDGHD 700
           EAYVIYNFM YLLNYLN G D
Sbjct: 121 EAYVIYNFMVYLLNYLNLGMD 141


>BT029687-1|ABL75744.1|  486|Drosophila melanogaster IP17403p
           protein.
          Length = 486

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
 Frame = +2

Query: 470 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYALNALIGLEFPEQS---IYLDSLRECYE 640
           I+  QI QH+  YT P  Q+ I+RIL++VPIYA  + I L F       IY  ++R+CYE
Sbjct: 80  ITCQQIYQHLRWYTNPQEQRWIVRILFIVPIYATYSWISLLFFNSDNVYIYFFTVRDCYE 139

Query: 641 AYVIYNFMKYLLNYL 685
           A+VIYNF+     YL
Sbjct: 140 AFVIYNFLSLCYEYL 154


>AY052085-1|AAK93509.1|  403|Drosophila melanogaster SD03655p
           protein.
          Length = 403

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
 Frame = +2

Query: 470 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYALNALIGLEFPEQS---IYLDSLRECYE 640
           I+  QI QH+  YT P  Q+ I+RIL++VPIYA  + I L F       IY  ++R+CYE
Sbjct: 80  ITCQQIYQHLRWYTNPQEQRWIVRILFIVPIYATYSWISLLFFNSDNVYIYFFTVRDCYE 139

Query: 641 AYVIYNFMKYLLNYL 685
           A+VIYNF+     YL
Sbjct: 140 AFVIYNFLSLCYEYL 154


>AE014296-291|AAN11491.1|  403|Drosophila melanogaster CG12004-PB,
           isoform B protein.
          Length = 403

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
 Frame = +2

Query: 470 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYALNALIGLEFPEQS---IYLDSLRECYE 640
           I+  QI QH+  YT P  Q+ I+RIL++VPIYA  + I L F       IY  ++R+CYE
Sbjct: 80  ITCQQIYQHLRWYTNPQEQRWIVRILFIVPIYATYSWISLLFFNSDNVYIYFFTVRDCYE 139

Query: 641 AYVIYNFMKYLLNYL 685
           A+VIYNF+     YL
Sbjct: 140 AFVIYNFLSLCYEYL 154


>AE014296-290|AAF47516.2|  403|Drosophila melanogaster CG12004-PA,
           isoform A protein.
          Length = 403

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
 Frame = +2

Query: 470 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYALNALIGLEFPEQS---IYLDSLRECYE 640
           I+  QI QH+  YT P  Q+ I+RIL++VPIYA  + I L F       IY  ++R+CYE
Sbjct: 80  ITCQQIYQHLRWYTNPQEQRWIVRILFIVPIYATYSWISLLFFNSDNVYIYFFTVRDCYE 139

Query: 641 AYVIYNFMKYLLNYL 685
           A+VIYNF+     YL
Sbjct: 140 AFVIYNFLSLCYEYL 154


>AY060768-1|AAL28316.1|  158|Drosophila melanogaster GH23035p
           protein.
          Length = 158

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 4/29 (13%)
 Frame = -2

Query: 230 NYIIQRINECDVVSDFYS----CFCFIFH 156
           NY+   I E DV  D+Y+    CFCF+ H
Sbjct: 104 NYVNHTIKEHDVRRDYYTDTTFCFCFLDH 132


>AE014296-2015|AAF50021.1|  158|Drosophila melanogaster CG6038-PA
           protein.
          Length = 158

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 4/29 (13%)
 Frame = -2

Query: 230 NYIIQRINECDVVSDFYS----CFCFIFH 156
           NY+   I E DV  D+Y+    CFCF+ H
Sbjct: 104 NYVNHTIKEHDVRRDYYTDTTFCFCFLDH 132


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,996,476
Number of Sequences: 53049
Number of extensions: 540484
Number of successful extensions: 841
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)