Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt20l22
         (364 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80452-13|AAB37850.1|  139|Caenorhabditis elegans Hypothetical p...    27   3.0  
Z93389-10|CAB07674.1|  417|Caenorhabditis elegans Hypothetical p...    27   5.3  
Z93379-11|CAB07595.1|  417|Caenorhabditis elegans Hypothetical p...    27   5.3  
U80027-12|AAC48126.2|  493|Caenorhabditis elegans Hypothetical p...    26   7.0  

>U80452-13|AAB37850.1|  139|Caenorhabditis elegans Hypothetical
           protein C16C8.8 protein.
          Length = 139

 Score = 27.5 bits (58), Expect = 3.0
 Identities = 18/53 (33%), Positives = 28/53 (52%)
 Frame = -1

Query: 160 FRKEIDSNK*YFLLTYIDTLLTSPIHYLFTKNIYENFFNKPKVFISNSRFLIR 2
           F K I + K Y  +  +D+LL S    L +KN+   F+  P   I ++RF+ R
Sbjct: 39  FTKFIKAVK-YSDVRVMDSLLLSSNENLSSKNMIREFYKYPNTKIHDARFVGR 90


>Z93389-10|CAB07674.1|  417|Caenorhabditis elegans Hypothetical
           protein F21H7.10 protein.
          Length = 417

 Score = 26.6 bits (56), Expect = 5.3
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -1

Query: 220 SNLHIEKYCVASPGLHTTEEFRK 152
           + +H ++YC+A   L  TE FR+
Sbjct: 63  TEMHADQYCIAYKFLEATESFRE 85


>Z93379-11|CAB07595.1|  417|Caenorhabditis elegans Hypothetical
           protein F21H7.10 protein.
          Length = 417

 Score = 26.6 bits (56), Expect = 5.3
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -1

Query: 220 SNLHIEKYCVASPGLHTTEEFRK 152
           + +H ++YC+A   L  TE FR+
Sbjct: 63  TEMHADQYCIAYKFLEATESFRE 85


>U80027-12|AAC48126.2|  493|Caenorhabditis elegans Hypothetical
           protein T28A11.17 protein.
          Length = 493

 Score = 26.2 bits (55), Expect = 7.0
 Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
 Frame = -1

Query: 238 YVLYLISNLHIEKYCVASPGLHTTEEFRKEIDSNK*YF-LLTYIDTLLTSPIHYLFTKNI 62
           ++  L+ N  IE+   +S    + +EF KE++ +K  F LL Y +  +        TK I
Sbjct: 163 HIFDLMKNNTIEEIWSSSLSNKSKKEFEKELNKSKVIFGLLDYNNVTMLEE-----TKLI 217

Query: 61  YENFFNKPKVFISNS 17
           YE  + + K  +S++
Sbjct: 218 YETEYYRLKSLLSSN 232


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,469,743
Number of Sequences: 27780
Number of extensions: 146271
Number of successful extensions: 288
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 288
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 503476126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)