Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt20l16
         (631 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73972-7|CAA98262.2|  305|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z49911-10|CAA90134.1|  471|Caenorhabditis elegans Hypothetical p...    28   4.8  
Z49909-18|CAA90117.1|  471|Caenorhabditis elegans Hypothetical p...    28   4.8  
U64847-8|AAQ91904.1|  558|Caenorhabditis elegans Acyltransferase...    28   4.8  
U64847-7|AAB04876.1|  718|Caenorhabditis elegans Acyltransferase...    28   4.8  
AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cycl...    28   4.8  
U41510-1|ABP49525.1|  327|Caenorhabditis elegans Hypothetical pr...    28   6.3  
AF077540-3|AAC26312.2|  421|Caenorhabditis elegans C-type lectin...    27   8.4  

>Z73972-7|CAA98262.2|  305|Caenorhabditis elegans Hypothetical
           protein F15H10.5 protein.
          Length = 305

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/55 (23%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
 Frame = +2

Query: 293 TMSASSVALERELAGTRRLLW----GDHVKEDVFRRWAQGFQFSPDEPSALIQQE 445
           +++A S+ALE+    T +++W    G++ +E V    A     +P+  + ++++E
Sbjct: 13  SINAQSLALEKRACNTEKIIWIPDYGEYYEEQVELSLASRTSMNPESMTRILKEE 67


>Z49911-10|CAA90134.1|  471|Caenorhabditis elegans Hypothetical
           protein C14A4.13 protein.
          Length = 471

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = +2

Query: 359 DHVK-EDVFRRWAQGFQFSPDEPSALIQQEGGPCAAIAPVQGFLLK 493
           D+VK  +V  +     +F+PD P  L  Q+GGPC AI   Q  ++K
Sbjct: 278 DYVKLREVLCQIMTSKKFTPDMP--LDWQKGGPCEAIFKPQAAVVK 321


>Z49909-18|CAA90117.1|  471|Caenorhabditis elegans Hypothetical
           protein C14A4.13 protein.
          Length = 471

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = +2

Query: 359 DHVK-EDVFRRWAQGFQFSPDEPSALIQQEGGPCAAIAPVQGFLLK 493
           D+VK  +V  +     +F+PD P  L  Q+GGPC AI   Q  ++K
Sbjct: 278 DYVKLREVLCQIMTSKKFTPDMP--LDWQKGGPCEAIFKPQAAVVK 321


>U64847-8|AAQ91904.1|  558|Caenorhabditis elegans
           Acyltransferase-like protein 6,isoform b protein.
          Length = 558

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 317 APRYSHSSFLCYTYYNSTTAVCRF 246
           +P+ SHSSF+    YN  + +CRF
Sbjct: 327 SPKESHSSFITLA-YNKNSVICRF 349


>U64847-7|AAB04876.1|  718|Caenorhabditis elegans
           Acyltransferase-like protein 6,isoform a protein.
          Length = 718

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 317 APRYSHSSFLCYTYYNSTTAVCRF 246
           +P+ SHSSF+    YN  + +CRF
Sbjct: 487 SPKESHSSFITLA-YNKNSVICRF 509


>AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cyclase
           protein 2 protein.
          Length = 1080

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -1

Query: 427 AGFIRTELKTLRPTSENIFFDVVPPQQASRACQLALQRHAT 305
           A + RTEL+TL+   E +   V+P   A +  +  +Q  +T
Sbjct: 242 AVYRRTELETLKDRQEQLLLSVIPAYLADQVSKSIIQSSST 282


>U41510-1|ABP49525.1|  327|Caenorhabditis elegans Hypothetical
           protein ZC449.6 protein.
          Length = 327

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = -3

Query: 359 PPTASVACLPARAPAPRYSHSSFLCYTYYNSTTAVCRFQ 243
           PP   V+CL     +   S SS+LCY  +NS+  + RF+
Sbjct: 256 PPHHFVSCLLV---STFVSLSSYLCYKIFNSSPPMTRFE 291


>AF077540-3|AAC26312.2|  421|Caenorhabditis elegans C-type lectin
           protein 21 protein.
          Length = 421

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 10/38 (26%), Positives = 22/38 (57%)
 Frame = +2

Query: 356 GDHVKEDVFRRWAQGFQFSPDEPSALIQQEGGPCAAIA 469
           G  V++  F RW  G ++S ++   +++++ G C  +A
Sbjct: 221 GGMVQDFGFSRWTDGSRWSYEKFDRILKRKNGECVVVA 258


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,905,253
Number of Sequences: 27780
Number of extensions: 315438
Number of successful extensions: 723
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 723
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)