Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt20l07
(362 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC025310-1|AAH25310.1| 542|Homo sapiens LRFN1 protein protein. 31 0.83
BC014678-1|AAH14678.1| 450|Homo sapiens LRFN1 protein protein. 31 0.83
AB040917-1|BAA96008.1| 700|Homo sapiens KIAA1484 protein protein. 31 0.83
AK131480-1|BAD18625.1| 325|Homo sapiens protein ( Homo sapiens ... 31 1.5
Z93020-1|CAI21594.1| 729|Homo sapiens RAN binding protein 9 pro... 30 1.9
D86425-1|BAA13087.1| 1376|Homo sapiens osteonidogen protein. 30 1.9
BX538231-1|CAD98074.1| 530|Homo sapiens hypothetical protein pr... 30 1.9
BC052781-1|AAH52781.1| 802|Homo sapiens RANBP9 protein protein. 30 1.9
AL441883-5|CAI19841.1| 729|Homo sapiens RAN binding protein 9 p... 30 1.9
AF091395-1|AAC43042.1| 3038|Homo sapiens Trio isoform protein. 30 1.9
AB209754-1|BAD92991.1| 2202|Homo sapiens triple functional domai... 30 1.9
AB055311-1|BAB62525.1| 729|Homo sapiens RanBPM protein. 30 1.9
AB040958-1|BAA96049.2| 1135|Homo sapiens KIAA1525 protein protein. 30 1.9
AB009799-1|BAA24112.1| 1376|Homo sapiens osteonidogen protein. 30 1.9
Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen... 30 2.5
Z37976-1|CAA86030.1| 1821|Homo sapiens LTBP-2 precursor protein. 30 2.5
X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1 p... 30 2.5
S82451-1|AAB37459.1| 1821|Homo sapiens latent transforming growt... 30 2.5
M11162-1|AAA75386.1| 138|Homo sapiens alpha-1 type I collagen p... 30 2.5
K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein. 30 2.5
BC078659-1|AAH78659.1| 1821|Homo sapiens latent transforming gro... 30 2.5
BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha... 30 2.5
AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen... 30 2.5
AC013451-1|AAF87081.1| 969|Homo sapiens LTBP-2 protein. 30 2.5
AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain ... 30 2.5
AB014527-1|BAA31602.1| 1324|Homo sapiens KIAA0627 protein protein. 30 2.5
AF347693-1|AAQ15051.1| 1538|Homo sapiens multiple asters 1 protein. 29 3.4
AB014522-1|BAA31597.1| 1289|Homo sapiens KIAA0622 protein protein. 29 3.4
Y19188-1|CAB60727.1| 759|Homo sapiens aczonin protein. 29 4.5
BC125271-1|AAI25272.1| 641|Homo sapiens PCLO protein protein. 29 4.5
BC122565-1|AAI22566.1| 641|Homo sapiens PCLO protein protein. 29 4.5
BC034988-1|AAH34988.1| 1036|Homo sapiens ULK2 protein protein. 29 4.5
AY017307-1|AAG52948.1| 3389|Homo sapiens CUB and sushi multiple ... 29 4.5
AL049637-3|CAI23011.1| 467|Homo sapiens DMRT-like family A2 pro... 29 4.5
AJ301580-1|CAC37946.1| 486|Homo sapiens doublesex-mab-3 (DM) do... 29 4.5
AF333704-1|AAK73475.2| 3566|Homo sapiens CUB and sushi multiple ... 29 4.5
AB209502-1|BAD92739.1| 2966|Homo sapiens CUB and Sushi multiple ... 29 4.5
AB014523-1|BAA31598.2| 1100|Homo sapiens KIAA0623 protein protein. 29 4.5
X87248-1|CAA60698.1| 341|Homo sapiens HP8 peptide protein. 29 5.9
BC110491-1|AAI10492.1| 621|Homo sapiens kelch repeat and BTB (P... 29 5.9
BC025276-1|AAH25276.2| 556|Homo sapiens UTP18, small subunit (S... 29 5.9
AY177390-1|AAO06908.1| 621|Homo sapiens sarcosynapsin protein. 29 5.9
AY176040-1|AAO22141.1| 621|Homo sapiens sarcosynapsin protein. 29 5.9
AK056577-1|BAB71222.1| 472|Homo sapiens protein ( Homo sapiens ... 29 5.9
AF151806-1|AAD34043.1| 521|Homo sapiens CGI-48 protein protein. 29 5.9
U58917-1|AAB99730.1| 866|Homo sapiens IL-17 receptor protein. 28 7.8
M92642-1|AAA58427.1| 1603|Homo sapiens alpha-1 type XVI collagen... 28 7.8
CT841520-1|CAJ86450.1| 866|Homo sapiens IL17R protein. 28 7.8
BX537373-1|CAD97615.1| 255|Homo sapiens hypothetical protein pr... 28 7.8
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 28 7.8
BC011624-1|AAH11624.1| 866|Homo sapiens interleukin 17 receptor... 28 7.8
AY358440-1|AAQ89948.1| 703|Homo sapiens NSP3 protein. 28 7.8
AY358179-1|AAQ88546.1| 108|Homo sapiens GSQS6193 protein. 28 7.8
AY016295-1|AAL13166.1| 1347|Homo sapiens type V preprocollagen a... 28 7.8
AK055004-1|BAB70838.1| 599|Homo sapiens protein ( Homo sapiens ... 28 7.8
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 28 7.8
AF124251-1|AAD28246.1| 703|Homo sapiens SH2-containing protein ... 28 7.8
AB209045-1|BAD92282.1| 1502|Homo sapiens alpha 2 type V collagen... 28 7.8
AB066564-1|BAB62266.1| 257|Homo sapiens HCCA2 protein. 28 7.8
AB061798-1|BAC10986.1| 514|Homo sapiens HBE269 protein. 28 7.8
AB028173-1|BAB18568.1| 255|Homo sapiens HCCA2 protein. 28 7.8
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 28 7.8
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 28 7.8
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 28 7.8
>BC025310-1|AAH25310.1| 542|Homo sapiens LRFN1 protein protein.
Length = 542
Score = 31.5 bits (68), Expect = 0.83
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = -3
Query: 360 PPVTPPGGAEP*AGTSGPPQRPGAQ---AQRETLGVRSRQS*ALAAGSAQRRPVTGINL 193
PP PP EP + P RPGA A+R + + L AQ RPV GI +
Sbjct: 167 PPAAPPPLTEPGSSDIATPGRPGANDSAAERRLVAAELTSNSVLIRWPAQ-RPVPGIRM 224
>BC014678-1|AAH14678.1| 450|Homo sapiens LRFN1 protein protein.
Length = 450
Score = 31.5 bits (68), Expect = 0.83
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = -3
Query: 360 PPVTPPGGAEP*AGTSGPPQRPGAQ---AQRETLGVRSRQS*ALAAGSAQRRPVTGINL 193
PP PP EP + P RPGA A+R + + L AQ RPV GI +
Sbjct: 94 PPAAPPPLTEPGSSDIATPGRPGANDSAAERRLVAAELTSNSVLIRWPAQ-RPVPGIRM 151
>AB040917-1|BAA96008.1| 700|Homo sapiens KIAA1484 protein protein.
Length = 700
Score = 31.5 bits (68), Expect = 0.83
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = -3
Query: 360 PPVTPPGGAEP*AGTSGPPQRPGAQ---AQRETLGVRSRQS*ALAAGSAQRRPVTGINL 193
PP PP EP + P RPGA A+R + + L AQ RPV GI +
Sbjct: 325 PPAAPPPLTEPGSSDIATPGRPGANDSAAERRLVAAELTSNSVLIRWPAQ-RPVPGIRM 382
>AK131480-1|BAD18625.1| 325|Homo sapiens protein ( Homo sapiens
cDNA FLJ16652 fis, clone TESTI4036767. ).
Length = 325
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = -1
Query: 362 PRRSPLRAVQSREQGHQDHHRGP---APRHSEKHSASEADRAER 240
P+R P R+ H+ RGP AP+ S +H A + D R
Sbjct: 92 PQRDPTHRAPQRDPTHRAPQRGPRHRAPQRSPRHRAPQRDPTHR 135
>Z93020-1|CAI21594.1| 729|Homo sapiens RAN binding protein 9
protein.
Length = 729
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/50 (40%), Positives = 22/50 (44%)
Frame = -3
Query: 360 PPVTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*ALAAGSAQRRP 211
PP PP A A SGPP PG A G + AL AGS+ P
Sbjct: 85 PPPPPPPPASAAAPASGPPAPPGLAAGPGPAG--GAPTPALVAGSSAAAP 132
>D86425-1|BAA13087.1| 1376|Homo sapiens osteonidogen protein.
Length = 1376
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +2
Query: 161 VWTPSRPNRSRRFIPVTGRL*ALPAASAQLCRLRTPSVSRCAWAPGLC 304
+WT P SR P+ R A A+ C RTP AW P +C
Sbjct: 95 MWTMISPPTSRPS-PLFWRTSTRATAEAESCTERTPPPQCWAWPPAMC 141
>BX538231-1|CAD98074.1| 530|Homo sapiens hypothetical protein
protein.
Length = 530
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 251 CRLRTPSVSRCAWAPGLCG--GPDVPAHGSAPPGGV 352
CR TP++SR +P G GPD+ +H A P G+
Sbjct: 478 CRPSTPALSRRTPSPSQGGYFGPDLYSHNKASPSGL 513
>BC052781-1|AAH52781.1| 802|Homo sapiens RANBP9 protein protein.
Length = 802
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/50 (40%), Positives = 22/50 (44%)
Frame = -3
Query: 360 PPVTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*ALAAGSAQRRP 211
PP PP A A SGPP PG A G + AL AGS+ P
Sbjct: 158 PPPPPPPPASAAAPASGPPAPPGLAAGPGPAG--GAPTPALVAGSSAAAP 205
>AL441883-5|CAI19841.1| 729|Homo sapiens RAN binding protein 9
protein.
Length = 729
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/50 (40%), Positives = 22/50 (44%)
Frame = -3
Query: 360 PPVTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*ALAAGSAQRRP 211
PP PP A A SGPP PG A G + AL AGS+ P
Sbjct: 85 PPPPPPPPASAAAPASGPPAPPGLAAGPGPAG--GAPTPALVAGSSAAAP 132
>AF091395-1|AAC43042.1| 3038|Homo sapiens Trio isoform protein.
Length = 3038
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -3
Query: 357 PVTPPGGAEP*AGTSGPPQR-PGAQAQ 280
P PP GA P AG S P +R PGA A+
Sbjct: 2315 PSLPPPGAAPEAGPSAPSRRPPGADAE 2341
>AB209754-1|BAD92991.1| 2202|Homo sapiens triple functional domain
(PTPRF interacting) variant protein.
Length = 2202
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -3
Query: 357 PVTPPGGAEP*AGTSGPPQR-PGAQAQ 280
P PP GA P AG S P +R PGA A+
Sbjct: 2013 PSLPPPGAAPEAGPSAPSRRPPGADAE 2039
>AB055311-1|BAB62525.1| 729|Homo sapiens RanBPM protein.
Length = 729
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/50 (40%), Positives = 22/50 (44%)
Frame = -3
Query: 360 PPVTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*ALAAGSAQRRP 211
PP PP A A SGPP PG A G + AL AGS+ P
Sbjct: 85 PPPPPPPPASAAAPASGPPAPPGLAAGPGPAG--GAPTPALVAGSSAAAP 132
>AB040958-1|BAA96049.2| 1135|Homo sapiens KIAA1525 protein protein.
Length = 1135
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 251 CRLRTPSVSRCAWAPGLCG--GPDVPAHGSAPPGGV 352
CR TP++SR +P G GPD+ +H A P G+
Sbjct: 956 CRPSTPALSRRTPSPSQGGYFGPDLYSHNKASPSGL 991
>AB009799-1|BAA24112.1| 1376|Homo sapiens osteonidogen protein.
Length = 1376
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +2
Query: 161 VWTPSRPNRSRRFIPVTGRL*ALPAASAQLCRLRTPSVSRCAWAPGLC 304
+WT P SR P+ R A A+ C RTP AW P +C
Sbjct: 95 MWTMISPPTSRPS-PLFWRTSTRATAEAESCTERTPPPQCWAWPPAMC 141
>Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen
protein.
Length = 1464
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -3
Query: 348 PPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*ALAAGSAQRRPVTG 202
PPG A G GPP PGA+ Q +G + A G A R V G
Sbjct: 555 PPGPAGQ-DGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG 602
>Z37976-1|CAA86030.1| 1821|Homo sapiens LTBP-2 precursor protein.
Length = 1821
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -2
Query: 310 TTTEARRPGTARNTRRPKP---TELSACCRERSETPRHRNKPSRP 185
T EARRP A+ +RR +P T S ++ PR R P+ P
Sbjct: 99 TEAEARRPSRAQQSRRVQPPAQTRRSTPLGQQQPAPRTRAAPALP 143
>X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1
protein.
Length = 1069
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -3
Query: 348 PPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*ALAAGSAQRRPVTG 202
PPG A G GPP PGA+ Q +G + A G A R V G
Sbjct: 555 PPGPAGQ-DGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG 602
>S82451-1|AAB37459.1| 1821|Homo sapiens latent transforming growth
factor-beta-binding protein-2 protein.
Length = 1821
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -2
Query: 310 TTTEARRPGTARNTRRPKP---TELSACCRERSETPRHRNKPSRP 185
T EARRP A+ +RR +P T S ++ PR R P+ P
Sbjct: 99 TEAEARRPSRAQQSRRVQPPAQTRRSTPLGQQQPAPRTRAAPALP 143
>M11162-1|AAA75386.1| 138|Homo sapiens alpha-1 type I collagen
protein.
Length = 138
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -3
Query: 348 PPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*ALAAGSAQRRPVTG 202
PPG A G GPP PGA+ Q +G + A G A R V G
Sbjct: 68 PPGPAGQ-DGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG 115
>K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein.
Length = 1040
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -3
Query: 348 PPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*ALAAGSAQRRPVTG 202
PPG A G GPP PGA+ Q +G + A G A R V G
Sbjct: 131 PPGPAGQ-DGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG 178
>BC078659-1|AAH78659.1| 1821|Homo sapiens latent transforming growth
factor beta binding protein 2 protein.
Length = 1821
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -2
Query: 310 TTTEARRPGTARNTRRPKP---TELSACCRERSETPRHRNKPSRP 185
T EARRP A+ +RR +P T S ++ PR R P+ P
Sbjct: 99 TEAEARRPSRAQQSRRVQPPAQTRRSTPLGQQQPAPRTRAAPALP 143
>BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha 1
protein.
Length = 1464
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -3
Query: 348 PPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*ALAAGSAQRRPVTG 202
PPG A G GPP PGA+ Q +G + A G A R V G
Sbjct: 555 PPGPAGQ-DGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG 602
>AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen
protein.
Length = 1461
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -3
Query: 348 PPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*ALAAGSAQRRPVTG 202
PPG A G GPP PGA+ Q +G + A G A R V G
Sbjct: 552 PPGPAGQ-DGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG 599
>AC013451-1|AAF87081.1| 969|Homo sapiens LTBP-2 protein.
Length = 969
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -2
Query: 310 TTTEARRPGTARNTRRPKP---TELSACCRERSETPRHRNKPSRP 185
T EARRP A+ +RR +P T S ++ PR R P+ P
Sbjct: 99 TEAEARRPSRAQQSRRVQPPAQTRRSTPLGQQQPAPRTRAAPALP 143
>AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain
precursor variant protein.
Length = 1467
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -3
Query: 348 PPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*ALAAGSAQRRPVTG 202
PPG A G GPP PGA+ Q +G + A G A R V G
Sbjct: 558 PPGPAGQ-DGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG 605
>AB014527-1|BAA31602.1| 1324|Homo sapiens KIAA0627 protein protein.
Length = 1324
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = -2
Query: 292 RPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSRRSPHH 158
R AR++R P+P+ C RE S P R S HH
Sbjct: 540 RLSVARSSRIPRPSVSQGCSREASRESSRDTSPVRSFQPLASRHH 584
>AF347693-1|AAQ15051.1| 1538|Homo sapiens multiple asters 1 protein.
Length = 1538
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -2
Query: 304 TEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSR 188
T R G AR++R P+P+ C R+ S P+R
Sbjct: 730 TSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPAR 768
>AB014522-1|BAA31597.1| 1289|Homo sapiens KIAA0622 protein protein.
Length = 1289
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -2
Query: 304 TEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSR 188
T R G AR++R P+P+ C R+ S P+R
Sbjct: 481 TSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPAR 519
>Y19188-1|CAB60727.1| 759|Homo sapiens aczonin protein.
Length = 759
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -3
Query: 360 PPVTPPGGAEP*AGTSGPPQRPGAQAQRE 274
PPV PPG +P A GP + P Q E
Sbjct: 315 PPVQPPGTTKPPAQPLGPAKPPAQQTGSE 343
>BC125271-1|AAI25272.1| 641|Homo sapiens PCLO protein protein.
Length = 641
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -3
Query: 360 PPVTPPGGAEP*AGTSGPPQRPGAQAQRE 274
PPV PPG +P A GP + P Q E
Sbjct: 331 PPVQPPGTTKPPAQPLGPAKPPAQQTGSE 359
>BC122565-1|AAI22566.1| 641|Homo sapiens PCLO protein protein.
Length = 641
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -3
Query: 360 PPVTPPGGAEP*AGTSGPPQRPGAQAQRE 274
PPV PPG +P A GP + P Q E
Sbjct: 331 PPVQPPGTTKPPAQPLGPAKPPAQQTGSE 359
>BC034988-1|AAH34988.1| 1036|Homo sapiens ULK2 protein protein.
Length = 1036
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 8/49 (16%)
Frame = +2
Query: 224 ALPAASAQLCRLRTPSV-------SRCAWAPGLC-GGPDVPAHGSAPPG 346
A P + R RT SV S CA + +C G P P GS+PPG
Sbjct: 735 AAPTCTHMFLRTRTTSVGPSNSGGSLCAMSGRVCVGSPPGPGFGSSPPG 783
>AY017307-1|AAG52948.1| 3389|Homo sapiens CUB and sushi multiple
domains protein 1 short form protein.
Length = 3389
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 293 PGLCGGPDVPAHGS 334
PG CG P PAHGS
Sbjct: 2861 PGFCGDPGTPAHGS 2874
>AL049637-3|CAI23011.1| 467|Homo sapiens DMRT-like family A2
protein.
Length = 467
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = -3
Query: 360 PPVTP--PGGAEP*AGTSGPPQRPGAQAQ 280
PPV P P GA+ GTS P RPG+ ++
Sbjct: 137 PPVKPLSPDGADSGPGTSSPEVRPGSGSE 165
>AJ301580-1|CAC37946.1| 486|Homo sapiens doublesex-mab-3 (DM)
domain protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = -3
Query: 360 PPVTP--PGGAEP*AGTSGPPQRPGAQAQ 280
PPV P P GA+ GTS P RPG+ ++
Sbjct: 156 PPVKPLSPDGADSGPGTSSPEVRPGSGSE 184
>AF333704-1|AAK73475.2| 3566|Homo sapiens CUB and sushi multiple
domains 1 protein protein.
Length = 3566
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 293 PGLCGGPDVPAHGS 334
PG CG P PAHGS
Sbjct: 2919 PGFCGDPGTPAHGS 2932
>AB209502-1|BAD92739.1| 2966|Homo sapiens CUB and Sushi multiple
domains 1 variant protein.
Length = 2966
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 293 PGLCGGPDVPAHGS 334
PG CG P PAHGS
Sbjct: 2334 PGFCGDPGTPAHGS 2347
>AB014523-1|BAA31598.2| 1100|Homo sapiens KIAA0623 protein protein.
Length = 1100
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 8/49 (16%)
Frame = +2
Query: 224 ALPAASAQLCRLRTPSV-------SRCAWAPGLC-GGPDVPAHGSAPPG 346
A P + R RT SV S CA + +C G P P GS+PPG
Sbjct: 799 AAPTCTHMFLRTRTTSVGPSNSGGSLCAMSGRVCVGSPPGPGFGSSPPG 847
>X87248-1|CAA60698.1| 341|Homo sapiens HP8 peptide protein.
Length = 341
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/44 (40%), Positives = 19/44 (43%)
Frame = -2
Query: 295 RRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSRRSP 164
RRP T TRRP+ T C RS T PV RR P
Sbjct: 173 RRPRTRTRTRRPR-TWPPRTCSSRSRTAARPPCTCSPVTPRRRP 215
>BC110491-1|AAI10492.1| 621|Homo sapiens kelch repeat and BTB (POZ)
domain containing 5 protein.
Length = 621
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -1
Query: 347 LRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRD 216
+ ++ +++G A + + K A E + AER+LPG L D
Sbjct: 265 ITTLRKKKKGKDGAGAKEADKGTSKAKAEEDEEAERILPGILND 308
>BC025276-1|AAH25276.2| 556|Homo sapiens UTP18, small subunit (SSU)
processome component, homolog (yeast) protein.
Length = 556
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -3
Query: 324 AGTSGPPQRPGAQAQRETLGVRSRQS*ALAAGSAQ 220
AG GPPQ+P +QR+ S + A+A +A+
Sbjct: 33 AGPGGPPQKPAPSSQRKPPARPSAAAAAIAVAAAE 67
>AY177390-1|AAO06908.1| 621|Homo sapiens sarcosynapsin protein.
Length = 621
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -1
Query: 347 LRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRD 216
+ ++ +++G A + + K A E + AER+LPG L D
Sbjct: 265 ITTLRKKKKGKDGAGAKEADKGTSKAKAEEDEEAERILPGILND 308
>AY176040-1|AAO22141.1| 621|Homo sapiens sarcosynapsin protein.
Length = 621
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -1
Query: 347 LRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRD 216
+ ++ +++G A + + K A E + AER+LPG L D
Sbjct: 265 ITTLRKKKKGKDGAGAKEADKGTSKAKAEEDEEAERILPGILND 308
>AK056577-1|BAB71222.1| 472|Homo sapiens protein ( Homo sapiens
cDNA FLJ32015 fis, clone NTONG1000052, weakly similar to
Rattus norvegicus mRNA for Kelch related protein 1. ).
Length = 472
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -1
Query: 347 LRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRD 216
+ ++ +++G A + + K A E + AER+LPG L D
Sbjct: 265 ITTLRKKKKGKDGAGAKEADKGTSKAKAEEDEEAERILPGILND 308
>AF151806-1|AAD34043.1| 521|Homo sapiens CGI-48 protein protein.
Length = 521
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -3
Query: 324 AGTSGPPQRPGAQAQRETLGVRSRQS*ALAAGSAQ 220
AG GPPQ+P +QR+ S + A+A +A+
Sbjct: 9 AGPGGPPQKPAPSSQRKPPARPSAAAAAIAVAAAE 43
>U58917-1|AAB99730.1| 866|Homo sapiens IL-17 receptor protein.
Length = 866
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -1
Query: 305 HRGPAPRHSEKHSASEADRAERLLPGALRDAPSPE*TFSTCL 180
H PAPR E H S R L G R + FS+CL
Sbjct: 250 HHIPAPRPEEFHQRSNVTLTLRNLKGCCRHQVQIQPFFSSCL 291
>M92642-1|AAA58427.1| 1603|Homo sapiens alpha-1 type XVI collagen
protein.
Length = 1603
Score = 28.3 bits (60), Expect = 7.8
Identities = 21/64 (32%), Positives = 28/64 (43%)
Frame = -3
Query: 360 PPVTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*ALAAGSAQRRPVTGINLLDLF 181
P T P G+ G G P PG QA++ + G+R + G + G LD
Sbjct: 1157 PGFTGPTGSPGFPGKVGSPGPPGPQAEKGSEGIRGPSGLPGSPGPPGPPGIQGPAGLD-- 1214
Query: 180 GLDG 169
GLDG
Sbjct: 1215 GLDG 1218
>CT841520-1|CAJ86450.1| 866|Homo sapiens IL17R protein.
Length = 866
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -1
Query: 305 HRGPAPRHSEKHSASEADRAERLLPGALRDAPSPE*TFSTCL 180
H PAPR E H S R L G R + FS+CL
Sbjct: 250 HHIPAPRPEEFHQRSNVTLTLRNLKGCCRHQVQIQPFFSSCL 291
>BX537373-1|CAD97615.1| 255|Homo sapiens hypothetical protein
protein.
Length = 255
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 345 PGGAEP*AGTSGPPQRPGAQAQRETL 268
PG EP G PP R GA +ET+
Sbjct: 21 PGSTEPREGEMSPPGRTGAHVCKETV 46
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = -2
Query: 340 RCRAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETP--RHRNKPSRPVWSRRS 167
+ R SR R+ + R +R + R + S C +++S+TP R R+ S+P R+
Sbjct: 751 KSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRT 810
Query: 166 P 164
P
Sbjct: 811 P 811
>BC011624-1|AAH11624.1| 866|Homo sapiens interleukin 17 receptor A
protein.
Length = 866
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -1
Query: 305 HRGPAPRHSEKHSASEADRAERLLPGALRDAPSPE*TFSTCL 180
H PAPR E H S R L G R + FS+CL
Sbjct: 250 HHIPAPRPEEFHQRSNVTLTLRNLKGCCRHQVQIQPFFSSCL 291
>AY358440-1|AAQ89948.1| 703|Homo sapiens NSP3 protein.
Length = 703
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 215 RL*ALPAASAQLCRLRTPSVSRCAWAPGLCGGPDVPAHGSAPPG 346
R+ A PAA + +P V+RC+ P LC G HG + G
Sbjct: 267 RVHAAPAAPSATALPASP-VARCSSEPQLCPGSAPKTHGESDKG 309
>AY358179-1|AAQ88546.1| 108|Homo sapiens GSQS6193 protein.
Length = 108
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = +1
Query: 286 LGAGP--LWWS*CPCSRLCTARRGDRR 360
LG+GP WWS CP R TAR +R+
Sbjct: 59 LGSGPPSSWWSICPPQRGKTARSLERK 85
>AY016295-1|AAL13166.1| 1347|Homo sapiens type V preprocollagen
alpha 2 chain protein.
Length = 1347
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3
Query: 357 PVTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSR 253
P PG + P G++GPP PG Q G+R +
Sbjct: 281 PTGSPGTSGP-PGSAGPPGSPGPQGSTGPQGIRGQ 314
>AK055004-1|BAB70838.1| 599|Homo sapiens protein ( Homo sapiens
cDNA FLJ30442 fis, clone BRACE2009212. ).
Length = 599
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/44 (29%), Positives = 16/44 (36%)
Frame = +1
Query: 208 DGASLSAPGSKRSALSASDAECFSLCLGAGPLWWS*CPCSRLCT 339
DG L G L CF C G G ++W R+ T
Sbjct: 530 DGTRLQLAGVPVGVLRTPGLRCFYCCTGCGKVFWDGSHLGRVAT 573
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator
subunit SRm300 protein.
Length = 2296
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = -2
Query: 340 RCRAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETP--RHRNKPSRPVWSRRS 167
+ R SR R+ + R +R + R + S C +++S+TP R R+ S+P R+
Sbjct: 751 KSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRT 810
Query: 166 P 164
P
Sbjct: 811 P 811
>AF124251-1|AAD28246.1| 703|Homo sapiens SH2-containing protein
Nsp3 protein.
Length = 703
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 215 RL*ALPAASAQLCRLRTPSVSRCAWAPGLCGGPDVPAHGSAPPG 346
R+ A PAA + +P V+RC+ P LC G HG + G
Sbjct: 267 RVHAAPAAPSATALPASP-VARCSSEPQLCPGSAPKTHGESDKG 309
>AB209045-1|BAD92282.1| 1502|Homo sapiens alpha 2 type V collagen
preproprotein variant protein.
Length = 1502
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3
Query: 357 PVTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSR 253
P PG + P G++GPP PG Q G+R +
Sbjct: 436 PTGSPGTSGP-PGSAGPPGSPGPQGSTGPQGIRGQ 469
>AB066564-1|BAB62266.1| 257|Homo sapiens HCCA2 protein.
Length = 257
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 345 PGGAEP*AGTSGPPQRPGAQAQRETL 268
PG EP G PP R GA +ET+
Sbjct: 21 PGSTEPREGEMSPPGRTGAHVCKETV 46
>AB061798-1|BAC10986.1| 514|Homo sapiens HBE269 protein.
Length = 514
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/44 (29%), Positives = 16/44 (36%)
Frame = +1
Query: 208 DGASLSAPGSKRSALSASDAECFSLCLGAGPLWWS*CPCSRLCT 339
DG L G L CF C G G ++W R+ T
Sbjct: 445 DGTRLQLAGVPVGVLRTPGLRCFYCCTGCGKVFWDGSHLGRVAT 488
>AB028173-1|BAB18568.1| 255|Homo sapiens HCCA2 protein.
Length = 255
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 345 PGGAEP*AGTSGPPQRPGAQAQRETL 268
PG EP G PP R GA +ET+
Sbjct: 21 PGSTEPREGEMSPPGRTGAHVCKETV 46
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = -2
Query: 340 RCRAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETP--RHRNKPSRPVWSRRS 167
+ R SR R+ + R +R + R + S C +++S+TP R R+ S+P R+
Sbjct: 751 KSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRT 810
Query: 166 P 164
P
Sbjct: 811 P 811
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = -2
Query: 340 RCRAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETP--RHRNKPSRPVWSRRS 167
+ R SR R+ + R +R + R + S C +++S+TP R R+ S+P R+
Sbjct: 716 KSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRT 775
Query: 166 P 164
P
Sbjct: 776 P 776
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = -2
Query: 340 RCRAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETP--RHRNKPSRPVWSRRS 167
+ R SR R+ + R +R + R + S C +++S+TP R R+ S+P R+
Sbjct: 541 KSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRT 600
Query: 166 P 164
P
Sbjct: 601 P 601
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,184,117
Number of Sequences: 237096
Number of extensions: 1415679
Number of successful extensions: 7915
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 6134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7864
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2248517154
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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