Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt20l02
         (515 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    29   0.12 
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    25   2.0  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   6.1  
CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline...    23   6.1  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   6.1  

>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 28.7 bits (61), Expect = 0.12
 Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +2

Query: 167 CGDDITEGKNRWSILADANKRQEK-AALPEN 256
           CG ++ E K  WS +   N+R+ K + +P+N
Sbjct: 204 CGPEMNETKGSWSTVVRKNRRKPKESVIPDN 234


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = -3

Query: 420 VNSHHQSQFPSHQTKVFLPSAQDHQLHQSSGAFA 319
           ++ HH     +    + +P++Q HQL+Q++ A A
Sbjct: 348 LHHHHPGHHAALHAHLGVPTSQHHQLNQAAVAAA 381


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = -3

Query: 366 PSAQDHQLHQSSGAFARNHMNYFLQLHHPHHS 271
           PS+   Q H        +H +     HHPHHS
Sbjct: 169 PSSYHQQQHPGHSQHHHHHHH-----HHPHHS 195


>CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline
           phosphatase protein.
          Length = 548

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 9/41 (21%), Positives = 20/41 (48%)
 Frame = -3

Query: 417 NSHHQSQFPSHQTKVFLPSAQDHQLHQSSGAFARNHMNYFL 295
           +SHH+S +  ++ ++   +    +     G F+  H+ Y L
Sbjct: 303 HSHHRSAYVQNRVQLLETNTAHGETDYLLGLFSSKHLPYHL 343


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 333 NFGGAGGPGQKAEKPS 380
           NFG  G PGQK ++ S
Sbjct: 354 NFGPVGLPGQKGDRGS 369


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 497,037
Number of Sequences: 2352
Number of extensions: 10258
Number of successful extensions: 36
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)