Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt20j23
(710 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1560 - 27730241-27730336,27730471-27730644,27730746-277309... 54 8e-08
04_04_0761 + 27841337-27841479,27842220-27842223,27842265-27843371 49 4e-06
09_06_0341 + 22406709-22407860 45 5e-05
08_02_1444 + 27135119-27135196,27135437-27135506,27135599-271357... 45 5e-05
01_06_0768 - 31829753-31829851,31830454-31830593,31830729-318308... 44 1e-04
06_01_0066 - 554637-555548 41 0.001
08_01_0462 + 4072369-4072630,4072732-4072814,4072937-4073020,407... 40 0.001
11_03_0169 + 11102198-11102272,11103716-11103767,11104071-111041... 40 0.003
08_02_1062 - 24016832-24016880,24016946-24016992,24017065-240171... 39 0.003
10_04_0002 - 7372425-7372601,7372697-7372780,7372859-7373010,737... 38 0.008
10_08_0301 - 16619499-16619675,16619770-16619853,16619932-166200... 38 0.010
02_05_1215 - 34982506-34982691,34982956-34983090,34983418-349834... 35 0.055
09_04_0073 - 14333096-14333290,14333377-14333638,14333811-143339... 35 0.073
08_02_1458 - 27270834-27271320,27271752-27271961,27272627-272736... 31 1.2
03_05_0042 + 20180151-20180468,20181595-20181665,20182929-201830... 31 1.2
03_02_0774 + 11074508-11074880,11076270-11076370,11076453-110765... 30 1.6
09_02_0119 - 4481522-4481580,4481615-4481718,4483132-4483231,448... 30 2.1
02_05_0581 - 30122279-30123124 29 2.8
03_06_0576 + 34832900-34832911,34833006-34833122,34833752-348338... 29 4.8
01_04_0082 + 15835137-15836312 29 4.8
11_06_0015 + 19281918-19282043,19282263-19282365,19282514-192825... 28 6.4
08_01_0685 + 6025975-6026074,6026168-6026357,6026963-6027034,602... 28 6.4
03_06_0300 + 32967935-32968029,32968975-32969077,32969175-329692... 28 6.4
09_02_0177 - 5390594-5390692,5391924-5391998,5392843-5392942,539... 28 8.4
07_01_0584 + 4345134-4345237,4346165-4346267,4346397-4346466,434... 28 8.4
06_03_1220 - 28505306-28508497 28 8.4
06_03_1219 - 28491185-28494415 28 8.4
05_01_0362 - 2832100-2832123,2832566-2832596,2832805-2833541,283... 28 8.4
03_06_0244 + 32613914-32614666 28 8.4
>07_03_1560 -
27730241-27730336,27730471-27730644,27730746-27730907,
27730993-27731101,27732268-27732374,27732875-27733141
Length = 304
Score = 54.4 bits (125), Expect = 8e-08
Identities = 29/97 (29%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Frame = +1
Query: 391 DVIHLLETLREDYL-LGLITNGPSRAQWQKIERLGLRKYFDCVLVSGDLPWEKPDQHIFH 567
D ++ E LR+ + +++N +R + ++ L +FD V VS ++ EKP+ IF
Sbjct: 169 DAKYVFEALRKAGVKTAVVSNFDTRLR-PLLQALNCDHWFDAVAVSAEVAAEKPNPTIFL 227
Query: 568 EACKLLNVEPRNCIMVGDKLETDIKGGKEAELAATVW 678
+AC+ L V+P + +GD D+ G ++A A +W
Sbjct: 228 KACEFLGVKPEEAVHIGDDRRNDLWGARDAGCDAWLW 264
>04_04_0761 + 27841337-27841479,27842220-27842223,27842265-27843371
Length = 417
Score = 48.8 bits (111), Expect = 4e-06
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Frame = +1
Query: 310 PKNYKHIAKSVSTEWLRLRFRYLALTNDVIHLLETLRE-DYLLGLITNGPSRAQWQKIER 486
P+ + +A + LR R+ L V+ L TL + D + + T P + + I+
Sbjct: 240 PQEVQRLAARKEVIYKTLRGRFYQLRPGVLDFLNTLVDFDIPIAITTPRPRLSLEEGIKA 299
Query: 487 LGLRKYFDCVLVSGDLPWEKPDQHIFHEACKLLNVEPRNCIMVGDKLET 633
+GL+ YFD ++ + D KP+ +F L +EP C+++G+ T
Sbjct: 300 VGLQGYFDAIVAAEDFCRGKPEGEMFEVTAGQLGLEPDVCLVLGNSNST 348
>09_06_0341 + 22406709-22407860
Length = 383
Score = 45.2 bits (102), Expect = 5e-05
Identities = 21/63 (33%), Positives = 36/63 (57%)
Frame = +1
Query: 433 LGLITNGPSRAQWQKIERLGLRKYFDCVLVSGDLPWEKPDQHIFHEACKLLNVEPRNCIM 612
L + T P + + I+ +G+R +FD V+ + D+ KPD +F A +LL+ P CI+
Sbjct: 236 LAVATTRPRKVIEEAIDAVGVRSFFDAVVAAEDVYRGKPDPEMFLYAAQLLSFIPERCIV 295
Query: 613 VGD 621
G+
Sbjct: 296 FGN 298
>08_02_1444 +
27135119-27135196,27135437-27135506,27135599-27135758,
27136005-27136086,27136335-27136551,27136729-27136793,
27137039-27137293
Length = 308
Score = 45.2 bits (102), Expect = 5e-05
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +1
Query: 520 VSGDLPWE-KPDQHIFHEACKLLNVEPRNCIMVGDKLETDIKGGKEAELAA 669
+ G++ W KPD+ I+ A L V P CI VGD L DIKG + +A+
Sbjct: 212 LGGEVKWMGKPDKVIYTSAMSLAGVNPHECITVGDSLHHDIKGANASRVAS 262
>01_06_0768 -
31829753-31829851,31830454-31830593,31830729-31830818,
31830905-31831059,31831598-31831663,31831862-31831931,
31832299-31832429,31832516-31832702,31832828-31832894
Length = 334
Score = 44.0 bits (99), Expect = 1e-04
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 4/204 (1%)
Frame = +1
Query: 85 VSAILFDLDNTLIQTRKGDTKACNKLVELLQNEYGLPKDMAVESGSTFLRAFRARPDDES 264
VSA++FDLD TL+ T + N+ + YG D E R + + +
Sbjct: 8 VSAVIFDLDGTLLDTERATRDVLNEFLAA----YGKVPDKEKEER----RLGQMYRESTT 59
Query: 265 YALHEWPAHLWRNCLPKNYKHIAKSVSTEWLRLRFRYLALTNDVIHLLETL-REDYLLGL 441
+ ++ LP + A ++ +L+ R++ V L++ L R L L
Sbjct: 60 GIIADYG-------LPLTVEEYAVAIYPLYLK-RWQKAKPLPGVERLVKHLHRNGVPLAL 111
Query: 442 ITNGPSRAQWQKIERLGLRKYFDC--VLVSGD-LPWEKPDQHIFHEACKLLNVEPRNCIM 612
+N R K+ L L+ + DC V++ GD +P KP IF EA K L V P +C++
Sbjct: 112 ASNSVRRNIDHKL--LKLKDWKDCFSVILGGDQVPRGKPSPDIFLEAAKGLGVNPSSCLV 169
Query: 613 VGDKLETDIKGGKEAELAATVWIP 684
+ D L ++G + A A V +P
Sbjct: 170 IEDSL-VGVQGAR-ASGAKVVAVP 191
>06_01_0066 - 554637-555548
Length = 303
Score = 40.7 bits (91), Expect = 0.001
Identities = 49/190 (25%), Positives = 78/190 (41%), Gaps = 5/190 (2%)
Frame = +1
Query: 73 ENSDVSAILFDLDNTLIQTRKGDTKACNKLVELLQNEYGLPKDMAVESGSTFLRAFRARP 252
E S V A+LFD+D T+ + +A ++L++ L G+P + E G + A R+
Sbjct: 65 EVSLVEAVLFDIDGTMCVSDPFHHRAFSELLQALGYNSGVP--ITPEFGMAHM-AGRSNH 121
Query: 253 DDESYALHEWPAHLWRNCLPKNYKHIAKSVSTEWLRLRFRYLALTNDVIHLLETLREDYL 432
S+ +WP H + A E L R+ L +V L + R
Sbjct: 122 QIGSFLFPDWPQH----------RLDAFFADKEALFARYAAEGL-REVAGLTDLCRWAAA 170
Query: 433 LGL----ITNGPSRAQWQKIERLGLRKYFDCVLVSG-DLPWEKPDQHIFHEACKLLNVEP 597
GL +TN P I LGL +F ++ + D KP + A LL P
Sbjct: 171 RGLKRAAVTNAPRANADLMISILGLSDFFQVIVAAADDCDLPKPSPEPYLRALSLLGASP 230
Query: 598 RNCIMVGDKL 627
R+ ++ D +
Sbjct: 231 RHTLVFEDSV 240
>08_01_0462 +
4072369-4072630,4072732-4072814,4072937-4073020,
4073509-4073584,4073712-4073784,4073878-4073951,
4074158-4074251,4074374-4074443
Length = 271
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/82 (28%), Positives = 39/82 (47%)
Frame = +1
Query: 433 LGLITNGPSRAQWQKIERLGLRKYFDCVLVSGDLPWEKPDQHIFHEACKLLNVEPRNCIM 612
L +++N +R + + ++ L + FD ++VS ++ EKP IF A + VE +
Sbjct: 171 LAVVSNFDTRLR-KLLKDLHVSDMFDAIVVSSEVGHEKPAPEIFKRALDQIGVEASKAVH 229
Query: 613 VGDKLETDIKGGKEAELAATVW 678
VGD D G L +W
Sbjct: 230 VGDDETADKAGANAIGLECWLW 251
>11_03_0169 +
11102198-11102272,11103716-11103767,11104071-11104185,
11104258-11104328,11105077-11105164,11105251-11105369,
11106276-11106278,11106327-11106397
Length = 197
Score = 39.5 bits (88), Expect = 0.003
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 4/113 (3%)
Frame = +1
Query: 301 NCLPKNYKHIAKSVSTEWLRL----RFRYLALTNDVIHLLETLREDYLLGLITNGPSRAQ 468
N L K + + +S E L+ + Y+ D+++ L+ + +Y + TN P Q
Sbjct: 26 NELAKKFFNDGRSFDLEGLKACMVRAYEYIDGVEDILYSLK--QNNYEVHAFTNYPVWYQ 83
Query: 469 WQKIERLGLRKYFDCVLVSGDLPWEKPDQHIFHEACKLLNVEPRNCIMVGDKL 627
+ E+L L KY S + KP + A LNV+P +CI + D++
Sbjct: 84 LVE-EKLKLSKYLSWTFCSCTVGKRKPSPDFYLHAVDHLNVDPASCIFIDDRM 135
>08_02_1062 -
24016832-24016880,24016946-24016992,24017065-24017124,
24017200-24017259,24017364-24017419,24017891-24017924,
24018015-24018089,24018348-24018398,24018495-24018539,
24019073-24019148,24019495-24019898
Length = 318
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/77 (27%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Frame = +1
Query: 487 LGLRKY--FDCVLVSGDLPWEKPDQHIFHEACKLLNVEPRNCIMVGDKLETDIKGGKEAE 660
+GL ++ DC L D+ +KPD I+ A + L V+ +NC++V D + ++ K A
Sbjct: 215 IGLERFNGLDCFLAGDDVKLKKPDPSIYITAAEKLGVQSQNCLVVEDSV-IGLQAAKGAG 273
Query: 661 LAATV-WIPLQKDEEIS 708
++ + + P +++ S
Sbjct: 274 MSCIITYTPSTANQDFS 290
>10_04_0002 -
7372425-7372601,7372697-7372780,7372859-7373010,
7373229-7373324,7373406-7373554,7373723-7373788,
7373925-7373994,7374106-7374236,7376464-7376471,
7377946-7378002
Length = 329
Score = 37.9 bits (84), Expect = 0.008
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +1
Query: 439 LITNGPSRAQWQKIE-RLGLRKYFDCVLVSGDLPWEKPDQHIFHEACKLLNVEPRNCIMV 615
L +N P KI G ++ F ++ ++ KP IF EA K +N P NC+++
Sbjct: 48 LASNSPGSNIEAKISCHQGWKESFSAIVGGDEVEKGKPSPDIFLEAAKRMNTNPPNCLVI 107
Query: 616 GDKLETDIKGGKEAELA 666
D L K + A +A
Sbjct: 108 EDSLCCSWKSCRNACIA 124
>10_08_0301 -
16619499-16619675,16619770-16619853,16619932-16620083,
16620296-16620391,16620473-16620627,16620791-16620856,
16620993-16621062,16621175-16621305,16622121-16622307,
16622410-16622485
Length = 397
Score = 37.5 bits (83), Expect = 0.010
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +1
Query: 439 LITNGPSRAQWQKIE-RLGLRKYFDCVLVSGDLPWEKPDQHIFHEACKLLNVEPRNCIMV 615
L +N P KI G ++ F ++ ++ KP IF EA K +N P NC+++
Sbjct: 114 LASNSPRSNIDAKISCHQGWKESFSAIVGGDEVEKGKPSPDIFLEAAKRMNTNPPNCLVI 173
Query: 616 GDKLETDIKGGKEA 657
D L + GK A
Sbjct: 174 EDSL-PGVAAGKAA 186
>02_05_1215 -
34982506-34982691,34982956-34983090,34983418-34983478,
34984515-34984557,34984674-34984944
Length = 231
Score = 35.1 bits (77), Expect = 0.055
Identities = 25/74 (33%), Positives = 32/74 (43%)
Frame = +1
Query: 436 GLITNGPSRAQWQKIERLGLRKYFDCVLVSGDLPWEKPDQHIFHEACKLLNVEPRNCIMV 615
GLIT A +R G+ F L P+ KPD C N+ P +MV
Sbjct: 107 GLITRNVKTAVDLFHQRFGMM--FSPALSREFRPY-KPDPAPLLHICSTWNIPPNEVVMV 163
Query: 616 GDKLETDIKGGKEA 657
GD L+ D+ GK A
Sbjct: 164 GDSLKDDVVCGKRA 177
>09_04_0073 -
14333096-14333290,14333377-14333638,14333811-14333965,
14334039-14334147,14335094-14335131
Length = 252
Score = 34.7 bits (76), Expect = 0.073
Identities = 41/182 (22%), Positives = 72/182 (39%), Gaps = 3/182 (1%)
Frame = +1
Query: 85 VSAILFDLDNTLIQTRKGDTKACNKLVELLQNEYGLPKDMAVESGSTFLRAFRARPDDES 264
+ A+LFD+D TL + A +++ + G+P D F+ R D E+
Sbjct: 21 IEAVLFDIDGTLCDSDPLHHVAFQEMLLEIGYNNGVPIDEEF-----FINNIAGRSDVEA 75
Query: 265 YA--LHEWPAHLWRNCLPKNYKHIAKSVSTEWLRLRFRYLALTNDVIHLLETLRED-YLL 435
+WP L K K + + ++ L L + +++ +++ Y
Sbjct: 76 AQNLFPDWP-------LEKGLKFL-EDKEAKYRSLAKERLEPVKGLAKVVQWVKDHGYKR 127
Query: 436 GLITNGPSRAQWQKIERLGLRKYFDCVLVSGDLPWEKPDQHIFHEACKLLNVEPRNCIMV 615
+TN P I LGL +F V+V G+ KP + +A K L V + +
Sbjct: 128 AAVTNAPRINSELMISLLGLTDFFQAVIVGGECEKPKPAPFPYLKALKELQVSADHTFIF 187
Query: 616 GD 621
D
Sbjct: 188 ED 189
>08_02_1458 - 27270834-27271320,27271752-27271961,27272627-27273624,
27274099-27274195,27274278-27274393,27274465-27274590,
27275123-27275233,27275347-27275428,27275844-27275989,
27276457-27276650,27277277-27277388,27277869-27278001,
27278295-27278437,27278488-27278562,27278830-27278937,
27279072-27279197,27279752-27279836,27280358-27280440,
27280545-27280625,27280709-27280789,27281960-27282034,
27282112-27282498,27282902-27283036
Length = 1396
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = -1
Query: 644 PLISVSSLSPTIMQLRGSTLRSLHAS----WKMC*SGFSQGRSPDTRTQSKYLRSPRRS 480
PLIS++ SP++ Q R T H S + +G D RT + LRS RRS
Sbjct: 1295 PLISLAHASPSMKQNRADTTPRSHTFEPGYHSSSGSQYDEGYEGDRRTGERQLRSMRRS 1353
>03_05_0042 +
20180151-20180468,20181595-20181665,20182929-20183087,
20183598-20183664,20183913-20184008,20184687-20184733,
20185113-20185193,20185704-20185806,20185967-20186028,
20187188-20187302,20193191-20195087,20195206-20195492
Length = 1100
Score = 30.7 bits (66), Expect = 1.2
Identities = 48/199 (24%), Positives = 83/199 (41%), Gaps = 7/199 (3%)
Frame = +1
Query: 46 IMANSGYFDENSDVSAILFDLDNTLIQTRKGDTKACNKLVELLQNEYGLPKDMAVESGST 225
+ A++G S +A+LFD D L+ T K D + + E G+ D VE
Sbjct: 64 VRASAGGAPAASLPAALLFDCDGVLVDTEK-DGHRISFNETFAERELGVSWD--VELYGE 120
Query: 226 FLRAFRARPDDESY-ALHEWPAHLWR-NCLPKNYKHIAKSVSTEWLR--LRFRYLALTND 393
L+ + +Y + WPA + + K + TE + + L L
Sbjct: 121 LLKIGGGKERMTAYFSKMGWPAKAPKTDDERKEFIASLHKRKTELFMALIEKKLLPLRPG 180
Query: 394 VIHLL-ETLREDYLLGLITNGPSRAQWQKIE-RLGLRKYFDCVLVSGDL-PWEKPDQHIF 564
V L+ E L + + + + +A + LG + + +GD+ P +KPD I+
Sbjct: 181 VQRLIDEALGKGVKVAVCSTSNEKAVSAIVSCLLGPDRAEKITIFAGDVVPRKKPDPAIY 240
Query: 565 HEACKLLNVEPRNCIMVGD 621
A L V+P +C++V D
Sbjct: 241 LLAATTLGVDPSSCVVVED 259
>03_02_0774 +
11074508-11074880,11076270-11076370,11076453-11076509,
11076596-11076690,11077480-11077579,11078272-11078330,
11078874-11079001,11079362-11079440,11079708-11079795,
11080490-11080590,11080822-11080900,11081740-11081850,
11082655-11082750,11082885-11083007,11085750-11085947,
11086071-11086172,11086570-11086634,11086888-11087008,
11088540-11088697,11088823-11088973,11089414-11089521,
11089939-11090031,11090285-11090321,11090659-11090906,
11091396-11091542,11091929-11092099,11092166-11092175,
11093360-11093505
Length = 1114
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +1
Query: 505 FDCVLVSGDLPWEKPDQHIFHEACKLLNVEPRNCIMVGDKLETDIKGGKEAEL-AATVWI 681
FD ++ + KP IF A K L V+ CI++ D L ++ K AE+ V
Sbjct: 210 FDAIVSADAFENLKPAPDIFLAASKTLGVDTDECIVIEDAL-AGVQAAKAAEMRCIAVMT 268
Query: 682 PLQKD 696
L++D
Sbjct: 269 TLEED 273
>09_02_0119 -
4481522-4481580,4481615-4481718,4483132-4483231,
4483307-4483404,4483688-4483828,4485736-4485788,
4486578-4486649,4487730-4487801,4487895-4487987,
4489040-4489107,4489268-4489358
Length = 316
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 544 KPDQHIFHEACKLLNVEPRNCIMVGDKLETDIKGGK 651
KP + K N+E MVGD+L+TDI G+
Sbjct: 251 KPSSFLMDFLLKSFNLETSRMCMVGDRLDTDILFGQ 286
>02_05_0581 - 30122279-30123124
Length = 281
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = +1
Query: 232 RAFRARPDDESYALHEWPAHLWRNCLPKNYKHIAKSVSTEWLRLR 366
R F AR D+E LH WR Y + + W++LR
Sbjct: 156 RPFTARDDEELVRLHRHTGGSWRKISRSVYGRTSAIMRDRWIQLR 200
>03_06_0576 +
34832900-34832911,34833006-34833122,34833752-34833810,
34833901-34833960,34834197-34834250,34834332-34834380,
34834493-34834540,34834889-34834954,34835591-34835641,
34835732-34835851,34835921-34836005,34836428-34836509,
34836666-34836774,34837005-34837051,34837131-34837188,
34839114-34839220,34839700-34839765,34839833-34839879,
34839977-34840042,34840146-34840243,34840344-34840469,
34840551-34840835,34840920-34840985,34841079-34841228
Length = 675
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 73 ENSDVSAILFDLDNTLIQTRKGDTKACNKLVE 168
E S +LFDLD+TL G AC K ++
Sbjct: 403 EGSKYECLLFDLDDTLYPFSSGINLACRKNIQ 434
>01_04_0082 + 15835137-15836312
Length = 391
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 554 NTSSTKHANFLTLSPVTALWLEI 622
NTSS ANF+ +P T W+E+
Sbjct: 113 NTSSPSVANFVVCNPATRQWMEL 135
>11_06_0015 +
19281918-19282043,19282263-19282365,19282514-19282581,
19282687-19282842,19282950-19283078,19283161-19283278,
19283368-19283462,19283579-19283731,19283822-19283917,
19284095-19284196
Length = 381
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = +1
Query: 70 DENSDVSAILFDLDNTLIQTRKGDTKACNKLVELLQNEYGLPKDMAVESGSTFLRAFRAR 249
DEN D+ + D D+ L+++ GD K + ++ L + D+A S + F +
Sbjct: 73 DENGDIYFEV-DNDDALLESIMGDDKTAHVIIGLDNTQVFADLDLAAASATEFAQEDDDD 131
Query: 250 PDDE 261
DD+
Sbjct: 132 DDDD 135
>08_01_0685 + 6025975-6026074,6026168-6026357,6026963-6027034,
6027187-6027258,6027354-6027425,6027784-6027855,
6027980-6028051,6028134-6028205,6028483-6028554,
6028791-6028865,6028970-6029041,6029134-6029199,
6029267-6029332,6029409-6029453,6029542-6029606,
6029697-6030076,6030455-6030653,6030725-6030883,
6030966-6031084,6031156-6031200,6031226-6031791,
6031871-6032021,6032117-6032454,6033702-6033765,
6034329-6034370,6035572-6035575,6035853-6036039,
6037252-6037323,6037687-6037758,6037867-6037938,
6038019-6038090,6038651-6038725,6038815-6038886,
6038988-6039053,6039163-6039228,6039348-6039392,
6039469-6039533,6039615-6039994,6040070-6040202,
6040354-6040512,6040599-6040717,6040805-6041015,
6041155-6041386,6041469-6041619,6041725-6042084
Length = 1952
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -1
Query: 305 QLRHRCAGHSCNAYDSSSGRALKARRNVEPLSTAMSLGR 189
QLR R + H Y S+ L +R PL+ ++ + R
Sbjct: 1907 QLRGRNSSHVTTGYSGSTADELSGQRETSPLTPSLEINR 1945
>03_06_0300 +
32967935-32968029,32968975-32969077,32969175-32969244,
32969464-32969581,32969687-32969744,32969831-32969895,
32969990-32969996,32970087-32970147,32970757-32970776,
32970858-32970923,32971126-32971293,32971372-32971629,
32972098-32972310,32972824-32973099
Length = 525
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -3
Query: 594 LNVKKFACFVEDVLIRFLPGQVPGYEDAVEVFAK 493
LN K+F F++ +L G++P VE+F K
Sbjct: 266 LNGKEFVSFLQQILEALNKGEIPSTGSLVEIFNK 299
>09_02_0177 -
5390594-5390692,5391924-5391998,5392843-5392942,
5393143-5393244,5393335-5393444,5393896-5393968,
5394976-5395043,5395382-5395475,5396804-5397165
Length = 360
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 567 VEDVLIRFLPGQVPGYEDAVEVFAKPEAF 481
+E++ R L VPGYE+AVE K E++
Sbjct: 188 IEELAAR-LASLVPGYENAVEAIRKEESY 215
>07_01_0584 +
4345134-4345237,4346165-4346267,4346397-4346466,
4346552-4346590,4346684-4346801,4346894-4346951,
4347031-4347095,4347281-4347341,4347678-4347779,
4348005-4348070,4348399-4348443,4348540-4348797,
4349289-4349501,4350103-4350411,4350461-4350613
Length = 587
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 594 LNVKKFACFVEDVLIRFLPGQVPGYEDAVEVFAK 493
LN K+F F+ +L G++P VEVF K
Sbjct: 266 LNGKEFVSFLRQILEALNKGEIPSTGSLVEVFNK 299
>06_03_1220 - 28505306-28508497
Length = 1063
Score = 27.9 bits (59), Expect = 8.4
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2
Query: 232 VGMWNRSPQPCLWEG 188
VG W RSP C W+G
Sbjct: 50 VGEWQRSPDCCTWDG 64
>06_03_1219 - 28491185-28494415
Length = 1076
Score = 27.9 bits (59), Expect = 8.4
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2
Query: 232 VGMWNRSPQPCLWEG 188
VG W RSP C W+G
Sbjct: 51 VGEWQRSPDCCTWDG 65
>05_01_0362 -
2832100-2832123,2832566-2832596,2832805-2833541,
2834333-2834825,2835762-2835770,2838062-2838561
Length = 597
Score = 27.9 bits (59), Expect = 8.4
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -3
Query: 189 AIFILQQFHELITSF-SISFSCLY*SVI*IE*YSRNITIFVKISTICHNLLRSKM*N 22
+I L F E TS +++FSCL V NIT+ ++ T CHNL K+ N
Sbjct: 186 SIHWLSLFPESFTSLVTLNFSCLEGEV--------NITVLERLVTRCHNLKTLKLNN 234
>03_06_0244 + 32613914-32614666
Length = 250
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 568 RGRCVDQVSPRAGPRIRGRSRSICEARGV 482
R RC + S PR+R R R++ EAR V
Sbjct: 53 RRRCGRRESVTGSPRVRPRGRAVREARAV 81
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,125,195
Number of Sequences: 37544
Number of extensions: 433300
Number of successful extensions: 1283
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1280
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -