Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt20j23
         (710 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    24   1.2  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   2.2  
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    23   3.8  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    23   3.8  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   3.8  
AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein ...    22   6.6  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    21   8.7  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 232 VGMWNRSPQPCLWEGHIHFAAV 167
           V +W+     C+W+  I FAAV
Sbjct: 354 VNLWSGFCSQCIWQEKIVFAAV 375


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +2

Query: 482 NASGFANTSTASSYPGTCPGRNLINTSSTKHANFLTLSPVT 604
           N S  A TST+ SYPG   G +   + S+  + F ++SP +
Sbjct: 70  NDSAAAITSTSPSYPG---GGSSSPSPSSPSSFFSSVSPTS 107


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 76  NSDVSAILFDLDNTLIQTRKGDTKACN 156
           N+D   ++  + N  I+  KG+T  CN
Sbjct: 101 NADDIQLVKGIANECIENAKGETDECN 127


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 76  NSDVSAILFDLDNTLIQTRKGDTKACN 156
           N+D   ++  + N  I+  KG+T  CN
Sbjct: 101 NADDIQLVKGIANECIENAKGETDECN 127


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 12/49 (24%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
 Frame = +2

Query: 446 RTDHRELNGRKSNASGF----ANTSTASSYPGTCPGRNLINTSSTKHAN 580
           +++H E  G++  A+ F     N+ + +     CPG  +  +  T+H N
Sbjct: 779 KSEHCE-KGKEYYAASFHTDIGNSQSLAHQDQCCPGFTMTKSGKTRHQN 826


>AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein
           protein.
          Length = 87

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -3

Query: 552 IRFLPGQVPGYEDAVEVFAKPEAFDFLP 469
           + F PG  P  ED+  V      + F+P
Sbjct: 49  VLFPPGPPPNNEDSSGVIVGASGYGFVP 76


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 189 PSQRHGCGERFHIPTRLQG 245
           P + H CG+ F  P  LQG
Sbjct: 42  PCKCHLCGKAFSRPWLLQG 60


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,094
Number of Sequences: 438
Number of extensions: 4382
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)