Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt20j02
(721 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y14823-1|CAA75100.1| 270|Drosophila melanogaster SURF-4 protein... 305 4e-83
AY118406-1|AAM48435.1| 270|Drosophila melanogaster RE62265p pro... 305 4e-83
AE014297-2017|AAN13656.1| 270|Drosophila melanogaster CG6202-PB... 305 4e-83
AE014297-2016|AAF55176.1| 270|Drosophila melanogaster CG6202-PA... 305 4e-83
U91980-1|AAC47506.1| 2346|Drosophila melanogaster Tpr homolog pr... 31 2.1
AE013599-1350|AAF58615.1| 2346|Drosophila melanogaster CG8274-PA... 31 2.1
AY121716-1|AAM52043.1| 90|Drosophila melanogaster SD25037p pro... 30 3.6
S63550-1|AAB27433.1| 921|Drosophila melanogaster transcription ... 29 4.8
BT025195-1|ABF17886.2| 851|Drosophila melanogaster FI01125p pro... 29 4.8
AY069807-1|AAL39952.1| 851|Drosophila melanogaster SD04735p pro... 29 4.8
AE014296-2641|AAS64986.1| 851|Drosophila melanogaster CG5444-PD... 29 4.8
AE014296-2640|AAO41248.1| 851|Drosophila melanogaster CG5444-PC... 29 4.8
AE014296-2639|AAF49536.1| 921|Drosophila melanogaster CG5444-PB... 29 4.8
AE014296-2638|AAF49535.1| 921|Drosophila melanogaster CG5444-PA... 29 4.8
>Y14823-1|CAA75100.1| 270|Drosophila melanogaster SURF-4 protein
protein.
Length = 270
Score = 305 bits (749), Expect = 4e-83
Identities = 144/222 (64%), Positives = 168/222 (75%)
Frame = +3
Query: 54 MQIPNEYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLEDGLRMWFQWSEQRDYMDMSW 233
M IPNEY++ EDVA+QVI++GKNVLPTVARLCLI+TF EDGLRM+ QW+EQR+YMDMSW
Sbjct: 1 MSIPNEYIAKTEDVAEQVIKRGKNVLPTVARLCLIATFFEDGLRMYIQWNEQREYMDMSW 60
Query: 234 GCGKFLATMFVIVNLFGQLGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFXXX 413
GCGKFLAT+FV+VNL GQLGGC MV+ R KVDIA G+LFFIVVLQT AYSILWD QF
Sbjct: 61 GCGKFLATVFVLVNLLGQLGGCGMVMARFKVDIAVGLLFFIVVLQTVAYSILWDFQFLLR 120
Query: 414 XXXXXXXXXXXXXXXXXXXXSLFAGVPSLGENKPKTYLQLAGRILLAFMFITLLRFEISF 593
SLFAGVPS+GENKPK ++QLAGRILLAFMFITL+RFE+S
Sbjct: 121 NFALIGALLLVLAEARIEGRSLFAGVPSMGENKPKNFMQLAGRILLAFMFITLIRFELSV 180
Query: 594 LQIIQDLLGSILMILVTVGYRTKXXXXXXXXXXXXXXXYHNA 719
Q+IQD++GSILM+LV +GY+TK YHNA
Sbjct: 181 WQVIQDIIGSILMVLVVLGYKTKLSALILVALLTILNLYHNA 222
>AY118406-1|AAM48435.1| 270|Drosophila melanogaster RE62265p
protein.
Length = 270
Score = 305 bits (749), Expect = 4e-83
Identities = 144/222 (64%), Positives = 168/222 (75%)
Frame = +3
Query: 54 MQIPNEYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLEDGLRMWFQWSEQRDYMDMSW 233
M IPNEY++ EDVA+QVI++GKNVLPTVARLCLI+TF EDGLRM+ QW+EQR+YMDMSW
Sbjct: 1 MSIPNEYIAKTEDVAEQVIKRGKNVLPTVARLCLIATFFEDGLRMYIQWNEQREYMDMSW 60
Query: 234 GCGKFLATMFVIVNLFGQLGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFXXX 413
GCGKFLAT+FV+VNL GQLGGC MV+ R KVDIA G+LFFIVVLQT AYSILWD QF
Sbjct: 61 GCGKFLATVFVLVNLLGQLGGCGMVMARFKVDIAVGLLFFIVVLQTVAYSILWDFQFLLR 120
Query: 414 XXXXXXXXXXXXXXXXXXXXSLFAGVPSLGENKPKTYLQLAGRILLAFMFITLLRFEISF 593
SLFAGVPS+GENKPK ++QLAGRILLAFMFITL+RFE+S
Sbjct: 121 NFALIGALLLVLAEARIEGRSLFAGVPSMGENKPKNFMQLAGRILLAFMFITLIRFELSV 180
Query: 594 LQIIQDLLGSILMILVTVGYRTKXXXXXXXXXXXXXXXYHNA 719
Q+IQD++GSILM+LV +GY+TK YHNA
Sbjct: 181 WQVIQDIIGSILMVLVVLGYKTKLSALILVALLTILNLYHNA 222
>AE014297-2017|AAN13656.1| 270|Drosophila melanogaster CG6202-PB,
isoform B protein.
Length = 270
Score = 305 bits (749), Expect = 4e-83
Identities = 144/222 (64%), Positives = 168/222 (75%)
Frame = +3
Query: 54 MQIPNEYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLEDGLRMWFQWSEQRDYMDMSW 233
M IPNEY++ EDVA+QVI++GKNVLPTVARLCLI+TF EDGLRM+ QW+EQR+YMDMSW
Sbjct: 1 MSIPNEYIAKTEDVAEQVIKRGKNVLPTVARLCLIATFFEDGLRMYIQWNEQREYMDMSW 60
Query: 234 GCGKFLATMFVIVNLFGQLGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFXXX 413
GCGKFLAT+FV+VNL GQLGGC MV+ R KVDIA G+LFFIVVLQT AYSILWD QF
Sbjct: 61 GCGKFLATVFVLVNLLGQLGGCGMVMARFKVDIAVGLLFFIVVLQTVAYSILWDFQFLLR 120
Query: 414 XXXXXXXXXXXXXXXXXXXXSLFAGVPSLGENKPKTYLQLAGRILLAFMFITLLRFEISF 593
SLFAGVPS+GENKPK ++QLAGRILLAFMFITL+RFE+S
Sbjct: 121 NFALIGALLLVLAEARIEGRSLFAGVPSMGENKPKNFMQLAGRILLAFMFITLIRFELSV 180
Query: 594 LQIIQDLLGSILMILVTVGYRTKXXXXXXXXXXXXXXXYHNA 719
Q+IQD++GSILM+LV +GY+TK YHNA
Sbjct: 181 WQVIQDIIGSILMVLVVLGYKTKLSALILVALLTILNLYHNA 222
>AE014297-2016|AAF55176.1| 270|Drosophila melanogaster CG6202-PA,
isoform A protein.
Length = 270
Score = 305 bits (749), Expect = 4e-83
Identities = 144/222 (64%), Positives = 168/222 (75%)
Frame = +3
Query: 54 MQIPNEYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLEDGLRMWFQWSEQRDYMDMSW 233
M IPNEY++ EDVA+QVI++GKNVLPTVARLCLI+TF EDGLRM+ QW+EQR+YMDMSW
Sbjct: 1 MSIPNEYIAKTEDVAEQVIKRGKNVLPTVARLCLIATFFEDGLRMYIQWNEQREYMDMSW 60
Query: 234 GCGKFLATMFVIVNLFGQLGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFXXX 413
GCGKFLAT+FV+VNL GQLGGC MV+ R KVDIA G+LFFIVVLQT AYSILWD QF
Sbjct: 61 GCGKFLATVFVLVNLLGQLGGCGMVMARFKVDIAVGLLFFIVVLQTVAYSILWDFQFLLR 120
Query: 414 XXXXXXXXXXXXXXXXXXXXSLFAGVPSLGENKPKTYLQLAGRILLAFMFITLLRFEISF 593
SLFAGVPS+GENKPK ++QLAGRILLAFMFITL+RFE+S
Sbjct: 121 NFALIGALLLVLAEARIEGRSLFAGVPSMGENKPKNFMQLAGRILLAFMFITLIRFELSV 180
Query: 594 LQIIQDLLGSILMILVTVGYRTKXXXXXXXXXXXXXXXYHNA 719
Q+IQD++GSILM+LV +GY+TK YHNA
Sbjct: 181 WQVIQDIIGSILMVLVVLGYKTKLSALILVALLTILNLYHNA 222
>U91980-1|AAC47506.1| 2346|Drosophila melanogaster Tpr homolog
protein.
Length = 2346
Score = 30.7 bits (66), Expect = 2.1
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Frame = -3
Query: 680 KHQSRQLRPVAHRHQ-----YHQDAP-EKILYDLQE*DFKS*ERDEHEGQQDATGELQVR 519
+ ++R LR + R Q YH++ + +L + E + ER E EG+Q L
Sbjct: 783 RQENRILRDTSSRLQIEKETYHREQQSQSLLLNSLEFIKTNLERSEMEGRQRLEQRLDDT 842
Query: 518 LRFVLSERRHAREQTAPFSSGLRQHQQ*RSDQCQIAEKE 402
+R + ++RRH +E+ F + + ++ ++ ++E
Sbjct: 843 VRELAAQRRHFQEEEEKFRESINEFKRQAETAIKLKDEE 881
>AE013599-1350|AAF58615.1| 2346|Drosophila melanogaster CG8274-PA
protein.
Length = 2346
Score = 30.7 bits (66), Expect = 2.1
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Frame = -3
Query: 680 KHQSRQLRPVAHRHQ-----YHQDAP-EKILYDLQE*DFKS*ERDEHEGQQDATGELQVR 519
+ ++R LR + R Q YH++ + +L + E + ER E EG+Q L
Sbjct: 783 RQENRILRDTSSRLQIEKETYHREQQSQSLLLNSLEFIKTNLERSEMEGRQRLEQRLDDT 842
Query: 518 LRFVLSERRHAREQTAPFSSGLRQHQQ*RSDQCQIAEKE 402
+R + ++RRH +E+ F + + ++ ++ ++E
Sbjct: 843 VRELAAQRRHFQEEEEKFRESINEFKRQAETAIKLKDEE 881
>AY121716-1|AAM52043.1| 90|Drosophila melanogaster SD25037p
protein.
Length = 90
Score = 29.9 bits (64), Expect = 3.6
Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = -2
Query: 246 ICRSPRTCPCSLS--ALTTGTTCGDRPPGMWI 157
ICR+PR PC TG CG P W+
Sbjct: 44 ICRTPRRSPCCPDPYRTATGRPCGPEIPAGWV 75
>S63550-1|AAB27433.1| 921|Drosophila melanogaster transcription
initiation factorTFIID 110 kda protein.
Length = 921
Score = 29.5 bits (63), Expect = 4.8
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -2
Query: 519 SSVCSLRATARPRTDCALQLGPPPTPAVALRSMPNCGEGTVRPI 388
+ + ++ + P + A+ GPPPTP +++ S N T PI
Sbjct: 516 TQIKAITPSLHPPSLAAISGGPPPTPTLSVLSTLNSASTTTLPI 559
>BT025195-1|ABF17886.2| 851|Drosophila melanogaster FI01125p
protein.
Length = 851
Score = 29.5 bits (63), Expect = 4.8
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -2
Query: 519 SSVCSLRATARPRTDCALQLGPPPTPAVALRSMPNCGEGTVRPI 388
+ + ++ + P + A+ GPPPTP +++ S N T PI
Sbjct: 446 TQIKAITPSLHPPSLAAISGGPPPTPTLSVLSTLNSASTTTLPI 489
>AY069807-1|AAL39952.1| 851|Drosophila melanogaster SD04735p
protein.
Length = 851
Score = 29.5 bits (63), Expect = 4.8
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -2
Query: 519 SSVCSLRATARPRTDCALQLGPPPTPAVALRSMPNCGEGTVRPI 388
+ + ++ + P + A+ GPPPTP +++ S N T PI
Sbjct: 446 TQIKAITPSLHPPSLAAISGGPPPTPTLSVLSTLNSASTTTLPI 489
>AE014296-2641|AAS64986.1| 851|Drosophila melanogaster CG5444-PD,
isoform D protein.
Length = 851
Score = 29.5 bits (63), Expect = 4.8
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -2
Query: 519 SSVCSLRATARPRTDCALQLGPPPTPAVALRSMPNCGEGTVRPI 388
+ + ++ + P + A+ GPPPTP +++ S N T PI
Sbjct: 446 TQIKAITPSLHPPSLAAISGGPPPTPTLSVLSTLNSASTTTLPI 489
>AE014296-2640|AAO41248.1| 851|Drosophila melanogaster CG5444-PC,
isoform C protein.
Length = 851
Score = 29.5 bits (63), Expect = 4.8
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -2
Query: 519 SSVCSLRATARPRTDCALQLGPPPTPAVALRSMPNCGEGTVRPI 388
+ + ++ + P + A+ GPPPTP +++ S N T PI
Sbjct: 446 TQIKAITPSLHPPSLAAISGGPPPTPTLSVLSTLNSASTTTLPI 489
>AE014296-2639|AAF49536.1| 921|Drosophila melanogaster CG5444-PB,
isoform B protein.
Length = 921
Score = 29.5 bits (63), Expect = 4.8
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -2
Query: 519 SSVCSLRATARPRTDCALQLGPPPTPAVALRSMPNCGEGTVRPI 388
+ + ++ + P + A+ GPPPTP +++ S N T PI
Sbjct: 516 TQIKAITPSLHPPSLAAISGGPPPTPTLSVLSTLNSASTTTLPI 559
>AE014296-2638|AAF49535.1| 921|Drosophila melanogaster CG5444-PA,
isoform A protein.
Length = 921
Score = 29.5 bits (63), Expect = 4.8
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -2
Query: 519 SSVCSLRATARPRTDCALQLGPPPTPAVALRSMPNCGEGTVRPI 388
+ + ++ + P + A+ GPPPTP +++ S N T PI
Sbjct: 516 TQIKAITPSLHPPSLAAISGGPPPTPTLSVLSTLNSASTTTLPI 559
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,445,040
Number of Sequences: 53049
Number of extensions: 776530
Number of successful extensions: 2912
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2890
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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