Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt20g22
         (628 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D38521-1|BAA07526.1| 1798|Homo sapiens KIAA0077 protein.               30   7.7  
BC113668-1|AAI13669.1| 1729|Homo sapiens proteasome (prosome, ma...    30   7.7  
BC112169-1|AAI12170.1| 1729|Homo sapiens proteasome (prosome, ma...    30   7.7  
AY894756-1|AAX83871.1| 1210|Homo sapiens proteasome activator 20...    30   7.7  

>D38521-1|BAA07526.1| 1798|Homo sapiens KIAA0077 protein.
          Length = 1798

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = +2

Query: 332 LIKYIELLMLTPNKTQL*LQR*MSLKPNCLSPVDMTHKLKHNICTRFI 475
           L K ++LL   PN     L R    KP+ L+PV  +HKL     T F+
Sbjct: 305 LNKLMKLLQRLPNSVVRRLHRERYKKPSWLTPVPDSHKLTDQDVTDFV 352


>BC113668-1|AAI13669.1| 1729|Homo sapiens proteasome (prosome,
           macropain) activator subunit 4 protein.
          Length = 1729

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = +2

Query: 332 LIKYIELLMLTPNKTQL*LQR*MSLKPNCLSPVDMTHKLKHNICTRFI 475
           L K ++LL   PN     L R    KP+ L+PV  +HKL     T F+
Sbjct: 236 LNKLMKLLQRLPNSVVRRLHRERYKKPSWLTPVPDSHKLTDQDVTDFV 283


>BC112169-1|AAI12170.1| 1729|Homo sapiens proteasome (prosome,
           macropain) activator subunit 4 protein.
          Length = 1729

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = +2

Query: 332 LIKYIELLMLTPNKTQL*LQR*MSLKPNCLSPVDMTHKLKHNICTRFI 475
           L K ++LL   PN     L R    KP+ L+PV  +HKL     T F+
Sbjct: 236 LNKLMKLLQRLPNSVVRRLHRERYKKPSWLTPVPDSHKLTDQDVTDFV 283


>AY894756-1|AAX83871.1| 1210|Homo sapiens proteasome activator 200
           kDa i protein.
          Length = 1210

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = +2

Query: 332 LIKYIELLMLTPNKTQL*LQR*MSLKPNCLSPVDMTHKLKHNICTRFI 475
           L K ++LL   PN     L R    KP+ L+PV  +HKL     T F+
Sbjct: 350 LNKLMKLLQRLPNSVVRRLHRERYKKPSWLTPVPDSHKLTDQDVTDFV 397


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,622,938
Number of Sequences: 237096
Number of extensions: 1531834
Number of successful extensions: 2094
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2094
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)