Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt20g17
         (730 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC025275-1|AAH25275.1|  483|Homo sapiens ATPase, H+ transporting...   174   2e-43
AF298777-1|AAG22809.1|  483|Homo sapiens vacuolar ATPase subunit...   174   2e-43
AF132945-1|AAD27720.1|  483|Homo sapiens CGI-11 protein protein.      174   2e-43
AF112204-1|AAF17192.1|  483|Homo sapiens Vacuolar proton pump su...   174   2e-43
AF125105-1|AAL75942.1|  476|Homo sapiens vacuolar proton pump su...   170   5e-42
AL139244-2|CAI18990.1|  569|Homo sapiens novel protein protein.        30   9.8  

>BC025275-1|AAH25275.1|  483|Homo sapiens ATPase, H+ transporting,
           lysosomal 50/57kDa, V1 subunit H protein.
          Length = 483

 Score =  174 bits (424), Expect = 2e-43
 Identities = 88/213 (41%), Positives = 133/213 (62%), Gaps = 24/213 (11%)
 Frame = +1

Query: 163 IDMIAATSVLQIRASEIRQTRINWQSYLQSQMITQRDHDFIVNLDQRG----QKDLPDKN 330
           +D    T+++  +A+E+R  ++NWQSYLQ QMI+  D +FI   + +     ++++    
Sbjct: 10  VDAAVPTNIIAAKAAEVRANKVNWQSYLQGQMISAEDCEFIQRFEMKRSPEEKQEMLQTE 69

Query: 331 PDACAEVFLNLLTHISKDHTIQYILVLIDDILSEDKSRVKIFRE-TKFSGNV-WQPFLNL 504
              CA+ F+NL+THI K+ T+QYIL ++DD+L E+  RV IF +  + S N  W  FL +
Sbjct: 70  GSQCAKTFINLMTHICKEQTVQYILTMVDDMLQENHQRVSIFFDYARCSKNTAWPYFLPM 129

Query: 505 LNRQDEFVQHMTARIIAKLACWHPQLMDKSDLHFYLSWLKDQL----------------- 633
           LNRQD F  HM ARIIAKLA W  +LM+ SDL++Y +W+K QL                 
Sbjct: 130 LNRQDPFTVHMAARIIAKLAAWGKELMEGSDLNYYFNWIKTQLSSQKLRGSGVAVETGTV 189

Query: 634 -KTNNNDYIQSVARCLQMMLRIDEYRFAFLSVD 729
             ++++ Y+Q VA CLQ+MLR++EYRFA++  D
Sbjct: 190 SSSDSSQYVQCVAGCLQLMLRVNEYRFAWVEAD 222


>AF298777-1|AAG22809.1|  483|Homo sapiens vacuolar ATPase subunit H
           protein.
          Length = 483

 Score =  174 bits (424), Expect = 2e-43
 Identities = 88/213 (41%), Positives = 133/213 (62%), Gaps = 24/213 (11%)
 Frame = +1

Query: 163 IDMIAATSVLQIRASEIRQTRINWQSYLQSQMITQRDHDFIVNLDQRG----QKDLPDKN 330
           +D    T+++  +A+E+R  ++NWQSYLQ QMI+  D +FI   + +     ++++    
Sbjct: 10  VDAAVPTNIIAAKAAEVRANKVNWQSYLQGQMISAEDCEFIQRFEMKRSPEEKQEMLQTE 69

Query: 331 PDACAEVFLNLLTHISKDHTIQYILVLIDDILSEDKSRVKIFRE-TKFSGNV-WQPFLNL 504
              CA+ F+NL+THI K+ T+QYIL ++DD+L E+  RV IF +  + S N  W  FL +
Sbjct: 70  GSQCAKTFINLMTHICKEQTVQYILTMVDDMLQENHQRVSIFFDYARCSKNTAWPYFLPM 129

Query: 505 LNRQDEFVQHMTARIIAKLACWHPQLMDKSDLHFYLSWLKDQL----------------- 633
           LNRQD F  HM ARIIAKLA W  +LM+ SDL++Y +W+K QL                 
Sbjct: 130 LNRQDPFTVHMAARIIAKLAAWGKELMEGSDLNYYFNWIKTQLSSQKLRGSGVAVETGTV 189

Query: 634 -KTNNNDYIQSVARCLQMMLRIDEYRFAFLSVD 729
             ++++ Y+Q VA CLQ+MLR++EYRFA++  D
Sbjct: 190 SSSDSSQYVQCVAGCLQLMLRVNEYRFAWVEAD 222


>AF132945-1|AAD27720.1|  483|Homo sapiens CGI-11 protein protein.
          Length = 483

 Score =  174 bits (424), Expect = 2e-43
 Identities = 88/213 (41%), Positives = 133/213 (62%), Gaps = 24/213 (11%)
 Frame = +1

Query: 163 IDMIAATSVLQIRASEIRQTRINWQSYLQSQMITQRDHDFIVNLDQRG----QKDLPDKN 330
           +D    T+++  +A+E+R  ++NWQSYLQ QMI+  D +FI   + +     ++++    
Sbjct: 10  VDAAVPTNIIAAKAAEVRANKVNWQSYLQGQMISAEDCEFIQRFEMKRSPEEKQEMLQTE 69

Query: 331 PDACAEVFLNLLTHISKDHTIQYILVLIDDILSEDKSRVKIFRE-TKFSGNV-WQPFLNL 504
              CA+ F+NL+THI K+ T+QYIL ++DD+L E+  RV IF +  + S N  W  FL +
Sbjct: 70  GSQCAKTFINLMTHICKEQTVQYILTMVDDMLQENHQRVSIFFDYARCSKNTAWPYFLPI 129

Query: 505 LNRQDEFVQHMTARIIAKLACWHPQLMDKSDLHFYLSWLKDQL----------------- 633
           LNRQD F  HM ARIIAKLA W  +LM+ SDL++Y +W+K QL                 
Sbjct: 130 LNRQDPFTVHMAARIIAKLAAWGKELMEGSDLNYYFNWIKTQLSSQKLRGSGVAVETGTV 189

Query: 634 -KTNNNDYIQSVARCLQMMLRIDEYRFAFLSVD 729
             ++++ Y+Q VA CLQ+MLR++EYRFA++  D
Sbjct: 190 SSSDSSQYVQCVAGCLQLMLRVNEYRFAWVEAD 222


>AF112204-1|AAF17192.1|  483|Homo sapiens Vacuolar proton pump
           subunit SFD alpha isoform protein.
          Length = 483

 Score =  174 bits (424), Expect = 2e-43
 Identities = 88/213 (41%), Positives = 133/213 (62%), Gaps = 24/213 (11%)
 Frame = +1

Query: 163 IDMIAATSVLQIRASEIRQTRINWQSYLQSQMITQRDHDFIVNLDQRG----QKDLPDKN 330
           +D    T+++  +A+E+R  ++NWQSYLQ QMI+  D +FI   + +     ++++    
Sbjct: 10  VDAAVPTNIIAAKAAEVRANKVNWQSYLQGQMISAEDCEFIQRFEMKRSPEEKQEMLQTE 69

Query: 331 PDACAEVFLNLLTHISKDHTIQYILVLIDDILSEDKSRVKIFRE-TKFSGNV-WQPFLNL 504
              CA+ F+NL+THI K+ T+QYIL ++DD+L E+  RV IF +  + S N  W  FL +
Sbjct: 70  GSQCAKTFINLMTHICKEQTVQYILTMVDDMLQENHQRVSIFFDYARCSKNTAWPYFLPM 129

Query: 505 LNRQDEFVQHMTARIIAKLACWHPQLMDKSDLHFYLSWLKDQL----------------- 633
           LNRQD F  HM ARIIAKLA W  +LM+ SDL++Y +W+K QL                 
Sbjct: 130 LNRQDPFTVHMAARIIAKLAAWGKELMEGSDLNYYFNWIKTQLSSQKLRGSGVAVETGTV 189

Query: 634 -KTNNNDYIQSVARCLQMMLRIDEYRFAFLSVD 729
             ++++ Y+Q VA CLQ+MLR++EYRFA++  D
Sbjct: 190 SSSDSSQYVQCVAGCLQLMLRVNEYRFAWVEAD 222


>AF125105-1|AAL75942.1|  476|Homo sapiens vacuolar proton pump
           subunit SFD alpha isoform protein.
          Length = 476

 Score =  170 bits (413), Expect = 5e-42
 Identities = 87/213 (40%), Positives = 131/213 (61%), Gaps = 24/213 (11%)
 Frame = +1

Query: 163 IDMIAATSVLQIRASEIRQTRINWQSYLQSQMITQRDHDFIVNLDQRG----QKDLPDKN 330
           +D    T+++  +A+E+R  ++NWQSYLQ QMI+  D +FI   +       ++++    
Sbjct: 10  VDAAVPTNIIAAKAAEVRANKVNWQSYLQGQMISAEDCEFIQRFEMERSPEEKQEMLQTE 69

Query: 331 PDACAEVFLNLLTHISKDHTIQYILVLIDDILSEDKSRVKIFRE-TKFSGNV-WQPFLNL 504
              CA+ F+NL+THI K+ T+QYIL ++DD+L E+  RV IF +  + S N  W  FL +
Sbjct: 70  GSQCAKTFINLMTHICKEQTVQYILTMVDDMLQENHQRVSIFFDYARCSKNTAWPYFLPM 129

Query: 505 LNRQDEFVQHMTARIIAKLACWHPQLMDKSDLHFYLSWLKDQL----------------- 633
           LNRQ  F  HM ARIIAKLA W  +LM+ SDL++Y +W+K QL                 
Sbjct: 130 LNRQVPFTVHMAARIIAKLAAWGKELMEGSDLNYYFNWIKTQLSSQKLRGSGVAVETGTV 189

Query: 634 -KTNNNDYIQSVARCLQMMLRIDEYRFAFLSVD 729
             ++++ Y+Q VA CLQ+MLR++EYRFA++  D
Sbjct: 190 SSSDSSQYVQCVAGCLQLMLRVNEYRFAWVEAD 222


>AL139244-2|CAI18990.1|  569|Homo sapiens novel protein protein.
          Length = 569

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 15/55 (27%), Positives = 26/55 (47%)
 Frame = +1

Query: 211 IRQTRINWQSYLQSQMITQRDHDFIVNLDQRGQKDLPDKNPDACAEVFLNLLTHI 375
           +R   +NWQ+Y     I  R +   +   + G   +PD+N  ACA+  L  +  +
Sbjct: 325 LRDPELNWQAYCTRAKIHIRAYLHDLKRAKMGLGGMPDRNHLACAKADLEEVVRV 379


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,630,879
Number of Sequences: 237096
Number of extensions: 2002296
Number of successful extensions: 4007
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3997
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)