Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt20g06
(590 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC009428-1|AAH09428.1| 152|Homo sapiens fission 1 (mitochondria... 144 2e-34
BC003540-1|AAH03540.1| 152|Homo sapiens fission 1 (mitochondria... 144 2e-34
AC006329-1|AAP22366.1| 152|Homo sapiens unknown protein. 144 2e-34
AF151893-1|AAD34130.1| 152|Homo sapiens CGI-135 protein protein. 142 1e-33
AF065163-1|AAG29340.1| 394|Homo sapiens Kcnk3 channel protein. 29 9.3
AF006823-1|AAC51777.1| 394|Homo sapiens TWIK-related acid-sensi... 29 9.3
AC015977-1|AAY24312.1| 394|Homo sapiens unknown protein. 29 9.3
>BC009428-1|AAH09428.1| 152|Homo sapiens fission 1 (mitochondrial
outer membrane) homolog (S. cerevisiae) protein.
Length = 152
Score = 144 bits (349), Expect = 2e-34
Identities = 71/121 (58%), Positives = 87/121 (71%), Gaps = 1/121 (0%)
Frame = +1
Query: 148 MEDVLDEIVSSEDLQKFERVFHEQLHQGNVSHKAQFEYAWCLVRSKYPTDIRKGILLLKE 327
ME VL+E+VS EDL KFE+ F + G+VS QFEYAWCLVRSKY DIRKGI+LL+E
Sbjct: 1 MEAVLNELVSVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEE 60
Query: 328 LF-NSHPEGKRDYLFYLAIGNARIKEYNKALHYVKSFLEIEPANQQVLALERQINKRMEK 504
L E +RDY+FYLA+GN R+KEY KAL YV+ L+ EP N Q LER I+K M+K
Sbjct: 61 LLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMKK 120
Query: 505 E 507
+
Sbjct: 121 D 121
>BC003540-1|AAH03540.1| 152|Homo sapiens fission 1 (mitochondrial
outer membrane) homolog (S. cerevisiae) protein.
Length = 152
Score = 144 bits (349), Expect = 2e-34
Identities = 71/121 (58%), Positives = 87/121 (71%), Gaps = 1/121 (0%)
Frame = +1
Query: 148 MEDVLDEIVSSEDLQKFERVFHEQLHQGNVSHKAQFEYAWCLVRSKYPTDIRKGILLLKE 327
ME VL+E+VS EDL KFE+ F + G+VS QFEYAWCLVRSKY DIRKGI+LL+E
Sbjct: 1 MEAVLNELVSVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEE 60
Query: 328 LF-NSHPEGKRDYLFYLAIGNARIKEYNKALHYVKSFLEIEPANQQVLALERQINKRMEK 504
L E +RDY+FYLA+GN R+KEY KAL YV+ L+ EP N Q LER I+K M+K
Sbjct: 61 LLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMKK 120
Query: 505 E 507
+
Sbjct: 121 D 121
>AC006329-1|AAP22366.1| 152|Homo sapiens unknown protein.
Length = 152
Score = 144 bits (349), Expect = 2e-34
Identities = 71/121 (58%), Positives = 87/121 (71%), Gaps = 1/121 (0%)
Frame = +1
Query: 148 MEDVLDEIVSSEDLQKFERVFHEQLHQGNVSHKAQFEYAWCLVRSKYPTDIRKGILLLKE 327
ME VL+E+VS EDL KFE+ F + G+VS QFEYAWCLVRSKY DIRKGI+LL+E
Sbjct: 1 MEAVLNELVSVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEE 60
Query: 328 LF-NSHPEGKRDYLFYLAIGNARIKEYNKALHYVKSFLEIEPANQQVLALERQINKRMEK 504
L E +RDY+FYLA+GN R+KEY KAL YV+ L+ EP N Q LER I+K M+K
Sbjct: 61 LLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMKK 120
Query: 505 E 507
+
Sbjct: 121 D 121
>AF151893-1|AAD34130.1| 152|Homo sapiens CGI-135 protein protein.
Length = 152
Score = 142 bits (343), Expect = 1e-33
Identities = 69/121 (57%), Positives = 87/121 (71%), Gaps = 1/121 (0%)
Frame = +1
Query: 148 MEDVLDEIVSSEDLQKFERVFHEQLHQGNVSHKAQFEYAWCLVRSKYPTDIRKGILLLKE 327
ME VL+E+VS EDL KFE+ F + G+VS QFEYAWCLVR++Y DIRKGI+LL+E
Sbjct: 1 MEAVLNELVSVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEE 60
Query: 328 LF-NSHPEGKRDYLFYLAIGNARIKEYNKALHYVKSFLEIEPANQQVLALERQINKRMEK 504
L E +RDY+FYLA+GN R+KEY KAL YV+ L+ EP N Q LER I+K M+K
Sbjct: 61 LLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMKK 120
Query: 505 E 507
+
Sbjct: 121 D 121
>AF065163-1|AAG29340.1| 394|Homo sapiens Kcnk3 channel protein.
Length = 394
Score = 29.5 bits (63), Expect = 9.3
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 290 QRIYERESYFLKNCSTLILKANVTTFSTLPLVMPE*RSTIRLCIM*NHSS 439
+ +Y +F CS L K+ ++P+++P ST C+ +HSS
Sbjct: 297 RNVYAEVLHFQSMCSCLWYKSREKLQYSIPMIIPRDLSTSDTCVEQSHSS 346
>AF006823-1|AAC51777.1| 394|Homo sapiens TWIK-related
acid-sensitive K+ channel protein.
Length = 394
Score = 29.5 bits (63), Expect = 9.3
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 290 QRIYERESYFLKNCSTLILKANVTTFSTLPLVMPE*RSTIRLCIM*NHSS 439
+ +Y +F CS L K+ ++P+++P ST C+ +HSS
Sbjct: 297 RNVYAEVLHFQSMCSCLWYKSREKLQYSIPMIIPRDLSTSDTCVEQSHSS 346
>AC015977-1|AAY24312.1| 394|Homo sapiens unknown protein.
Length = 394
Score = 29.5 bits (63), Expect = 9.3
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 290 QRIYERESYFLKNCSTLILKANVTTFSTLPLVMPE*RSTIRLCIM*NHSS 439
+ +Y +F CS L K+ ++P+++P ST C+ +HSS
Sbjct: 297 RNVYAEVLHFQSMCSCLWYKSREKLQYSIPMIIPRDLSTSDTCVEQSHSS 346
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,267,957
Number of Sequences: 237096
Number of extensions: 1723662
Number of successful extensions: 3722
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3718
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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