Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt20g05
         (755 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   5.4  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   9.4  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   9.4  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   9.4  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   9.4  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -2

Query: 706 LNLEEYSRPESTITLHNWNH 647
           L +EE++    T+ +H W H
Sbjct: 525 LEVEEWNPLTDTVPIHTWIH 544


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = +3

Query: 42  YYMYKNLKVFFCNFRSLSSKVRSGYKMVRY 131
           YY YK L V       L   + SGY +  Y
Sbjct: 320 YYKYKYLNVINALEMRLMDAIDSGYLIDEY 349


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = +3

Query: 42  YYMYKNLKVFFCNFRSLSSKVRSGYKMVRY 131
           YY YK L V       L   + SGY +  Y
Sbjct: 320 YYKYKYLNVINALEMRLMDAIDSGYLIDEY 349


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/31 (25%), Positives = 14/31 (45%)
 Frame = +1

Query: 277 ALREFLSCFTIWPKICACQKINQLILQKHWN 369
           A R+F S   +W     C ++     + +WN
Sbjct: 811 AFRKFTSASDVWSMGIVCWEVMSYGERPYWN 841


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 682 PESTITLHNWNHSSGDNIGVCSSLVS 605
           PE + T   +   S D +G CSSL++
Sbjct: 375 PEVSSTYTGFGIQSTDFVGDCSSLLN 400


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,030
Number of Sequences: 438
Number of extensions: 4748
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)