Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt20f07
(711 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y00472-1|CAA68533.1| 222|Homo sapiens protein ( Human mRNA for ... 294 2e-79
BT006967-1|AAP35613.1| 222|Homo sapiens superoxide dismutase 2,... 293 4e-79
BC012423-1|AAH12423.1| 222|Homo sapiens superoxide dismutase 2,... 293 4e-79
AY267901-1|AAP03428.1| 222|Homo sapiens superoxide dismutase 2,... 293 4e-79
AL135914-1|CAI21845.1| 222|Homo sapiens superoxide dismutase 2,... 293 4e-79
DQ003134-1|AAY21807.1| 212|Homo sapiens manganese-containing su... 293 5e-79
AY280721-1|AAP34410.1| 213|Homo sapiens manganese-containing su... 293 5e-79
AY280719-1|AAP34408.1| 210|Homo sapiens manganese-containing su... 293 5e-79
AY280718-1|AAP34407.1| 213|Homo sapiens manganese-containing su... 293 5e-79
X59445-1|CAA42066.1| 222|Homo sapiens manganese superoxide dism... 292 9e-79
X15132-1|CAA33228.1| 222|Homo sapiens protein ( Human mRNA for ... 292 9e-79
X07834-1|CAA30687.1| 222|Homo sapiens protein ( Human mRNA for ... 291 2e-78
AY280720-1|AAP34409.1| 209|Homo sapiens manganese-containing su... 291 2e-78
Y00985-1|CAA68791.1| 222|Homo sapiens protein ( Human mRNA for ... 291 2e-78
X14322-1|CAA32502.1| 222|Homo sapiens Manganese superoxide dism... 291 2e-78
M36693-1|AAA36622.1| 222|Homo sapiens protein ( Human manganese... 291 2e-78
AL135914-2|CAI21846.1| 161|Homo sapiens superoxide dismutase 2,... 92 2e-18
BC016934-1|AAH16934.1| 140|Homo sapiens SOD2 protein protein. 91 3e-18
L34157-1|AAA83933.1| 75|Homo sapiens manganese superoxide dism... 89 1e-17
D83493-1|BAA18955.1| 38|Homo sapiens MnSOD precursor protein. 35 0.33
U02619-1|AAA17985.1| 2109|Homo sapiens TFIIIC Box B-binding subu... 31 4.1
BC044857-1|AAH44857.1| 978|Homo sapiens GTF3C1 protein protein. 31 4.1
AK131479-1|BAD18624.1| 279|Homo sapiens Da (GTF3C1). protein. 31 4.1
AC002303-1|AAB67637.1| 1857|Homo sapiens Transcription factor (T... 31 4.1
Y15635-1|CAA75729.1| 2273|Homo sapiens ABCR protein. 30 9.4
AF001945-1|AAC05632.1| 2273|Homo sapiens rim ABC transporter pro... 30 9.4
AF000148-1|AAC23915.1| 2273|Homo sapiens ATP-binding cassette tr... 30 9.4
AB210040-1|BAE06122.1| 2303|Homo sapiens ABCA4 variant protein p... 30 9.4
>Y00472-1|CAA68533.1| 222|Homo sapiens protein ( Human mRNA for Mn
superoxide dismutase (EC 1.15.1.1.). ).
Length = 222
Score = 294 bits (721), Expect = 2e-79
Identities = 131/185 (70%), Positives = 152/185 (82%), Gaps = 1/185 (0%)
Frame = +3
Query: 159 SRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAKGDIDTI 338
SRQKH+LP+LPY+Y ALEP I+ +IM LHHSKHHA Y+NNLNV EEK +A AKGD+
Sbjct: 22 SRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQ 81
Query: 339 INLAPALKFNGGGHINHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVA 515
I L PALKFNGGGHINHSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV
Sbjct: 82 IALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVG 141
Query: 516 VQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYV 695
VQGSGWGWLG+NKQ LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+
Sbjct: 142 VQGSGWGWLGFNKQRGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYL 201
Query: 696 KAIFD 710
KAI++
Sbjct: 202 KAIWN 206
>BT006967-1|AAP35613.1| 222|Homo sapiens superoxide dismutase 2,
mitochondrial protein.
Length = 222
Score = 293 bits (719), Expect = 4e-79
Identities = 132/198 (66%), Positives = 159/198 (80%), Gaps = 1/198 (0%)
Frame = +3
Query: 120 SQRIGSLIRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEK 299
S+++ ++ G SRQKH+LP+LPY+Y ALEP I+ +IM LHHSKHHA Y+NNLNV EEK
Sbjct: 10 SRQLAPVLGYLG-SRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEK 68
Query: 300 LAQAQAKGDIDTIINLAPALKFNGGGHINHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSW 476
+A AKGD+ I L PALKFNGGGHINHSIFW NLSPNGG +P L +A+++DFGS+
Sbjct: 69 YQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSF 128
Query: 477 DNLKNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHA 656
D K +L+ ASV VQGSGWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHA
Sbjct: 129 DKFKEKLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHA 188
Query: 657 YYLQYKNVRADYVKAIFD 710
YYLQYKNVR DY+KAI++
Sbjct: 189 YYLQYKNVRPDYLKAIWN 206
>BC012423-1|AAH12423.1| 222|Homo sapiens superoxide dismutase 2,
mitochondrial protein.
Length = 222
Score = 293 bits (719), Expect = 4e-79
Identities = 132/198 (66%), Positives = 159/198 (80%), Gaps = 1/198 (0%)
Frame = +3
Query: 120 SQRIGSLIRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEK 299
S+++ ++ G SRQKH+LP+LPY+Y ALEP I+ +IM LHHSKHHA Y+NNLNV EEK
Sbjct: 10 SRQLAPVLGYLG-SRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEK 68
Query: 300 LAQAQAKGDIDTIINLAPALKFNGGGHINHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSW 476
+A AKGD+ I L PALKFNGGGHINHSIFW NLSPNGG +P L +A+++DFGS+
Sbjct: 69 YQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSF 128
Query: 477 DNLKNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHA 656
D K +L+ ASV VQGSGWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHA
Sbjct: 129 DKFKEKLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHA 188
Query: 657 YYLQYKNVRADYVKAIFD 710
YYLQYKNVR DY+KAI++
Sbjct: 189 YYLQYKNVRPDYLKAIWN 206
>AY267901-1|AAP03428.1| 222|Homo sapiens superoxide dismutase 2,
mitochondrial protein.
Length = 222
Score = 293 bits (719), Expect = 4e-79
Identities = 132/198 (66%), Positives = 159/198 (80%), Gaps = 1/198 (0%)
Frame = +3
Query: 120 SQRIGSLIRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEK 299
S+++ ++ G SRQKH+LP+LPY+Y ALEP I+ +IM LHHSKHHA Y+NNLNV EEK
Sbjct: 10 SRQLAPVLGYLG-SRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEK 68
Query: 300 LAQAQAKGDIDTIINLAPALKFNGGGHINHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSW 476
+A AKGD+ I L PALKFNGGGHINHSIFW NLSPNGG +P L +A+++DFGS+
Sbjct: 69 YQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSF 128
Query: 477 DNLKNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHA 656
D K +L+ ASV VQGSGWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHA
Sbjct: 129 DKFKEKLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHA 188
Query: 657 YYLQYKNVRADYVKAIFD 710
YYLQYKNVR DY+KAI++
Sbjct: 189 YYLQYKNVRPDYLKAIWN 206
>AL135914-1|CAI21845.1| 222|Homo sapiens superoxide dismutase 2,
mitochondrial protein.
Length = 222
Score = 293 bits (719), Expect = 4e-79
Identities = 132/198 (66%), Positives = 159/198 (80%), Gaps = 1/198 (0%)
Frame = +3
Query: 120 SQRIGSLIRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEK 299
S+++ ++ G SRQKH+LP+LPY+Y ALEP I+ +IM LHHSKHHA Y+NNLNV EEK
Sbjct: 10 SRQLAPVLGYLG-SRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEK 68
Query: 300 LAQAQAKGDIDTIINLAPALKFNGGGHINHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSW 476
+A AKGD+ I L PALKFNGGGHINHSIFW NLSPNGG +P L +A+++DFGS+
Sbjct: 69 YQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSF 128
Query: 477 DNLKNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHA 656
D K +L+ ASV VQGSGWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHA
Sbjct: 129 DKFKEKLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHA 188
Query: 657 YYLQYKNVRADYVKAIFD 710
YYLQYKNVR DY+KAI++
Sbjct: 189 YYLQYKNVRPDYLKAIWN 206
>DQ003134-1|AAY21807.1| 212|Homo sapiens manganese-containing
superoxide dismutase protein.
Length = 212
Score = 293 bits (718), Expect = 5e-79
Identities = 130/185 (70%), Positives = 152/185 (82%), Gaps = 1/185 (0%)
Frame = +3
Query: 159 SRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAKGDIDTI 338
SRQKH+LP+LPY+Y ALEP I+ +IM LHHSKHHA Y+NNLNV EEK +A AKGD+
Sbjct: 21 SRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQ 80
Query: 339 INLAPALKFNGGGHINHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVA 515
I L PALKFNGGGHINHSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV
Sbjct: 81 IALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVG 140
Query: 516 VQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYV 695
VQGSGWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+
Sbjct: 141 VQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYL 200
Query: 696 KAIFD 710
KAI++
Sbjct: 201 KAIWN 205
>AY280721-1|AAP34410.1| 213|Homo sapiens manganese-containing
superoxide dismutase protein.
Length = 213
Score = 293 bits (718), Expect = 5e-79
Identities = 130/185 (70%), Positives = 152/185 (82%), Gaps = 1/185 (0%)
Frame = +3
Query: 159 SRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAKGDIDTI 338
SRQKH+LP+LPY+Y ALEP I+ +IM LHHSKHHA Y+NNLNV EEK +A AKGD+
Sbjct: 18 SRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQ 77
Query: 339 INLAPALKFNGGGHINHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVA 515
I L PALKFNGGGHINHSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV
Sbjct: 78 IALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVG 137
Query: 516 VQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYV 695
VQGSGWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+
Sbjct: 138 VQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYL 197
Query: 696 KAIFD 710
KAI++
Sbjct: 198 KAIWN 202
>AY280719-1|AAP34408.1| 210|Homo sapiens manganese-containing
superoxide dismutase protein.
Length = 210
Score = 293 bits (718), Expect = 5e-79
Identities = 130/185 (70%), Positives = 152/185 (82%), Gaps = 1/185 (0%)
Frame = +3
Query: 159 SRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAKGDIDTI 338
SRQKH+LP+LPY+Y ALEP I+ +IM LHHSKHHA Y+NNLNV EEK +A AKGD+
Sbjct: 18 SRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQ 77
Query: 339 INLAPALKFNGGGHINHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVA 515
I L PALKFNGGGHINHSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV
Sbjct: 78 IALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVG 137
Query: 516 VQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYV 695
VQGSGWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+
Sbjct: 138 VQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYL 197
Query: 696 KAIFD 710
KAI++
Sbjct: 198 KAIWN 202
>AY280718-1|AAP34407.1| 213|Homo sapiens manganese-containing
superoxide dismutase protein.
Length = 213
Score = 293 bits (718), Expect = 5e-79
Identities = 130/185 (70%), Positives = 152/185 (82%), Gaps = 1/185 (0%)
Frame = +3
Query: 159 SRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAKGDIDTI 338
SRQKH+LP+LPY+Y ALEP I+ +IM LHHSKHHA Y+NNLNV EEK +A AKGD+
Sbjct: 21 SRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQ 80
Query: 339 INLAPALKFNGGGHINHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVA 515
I L PALKFNGGGHINHSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV
Sbjct: 81 IALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVG 140
Query: 516 VQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYV 695
VQGSGWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+
Sbjct: 141 VQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYL 200
Query: 696 KAIFD 710
KAI++
Sbjct: 201 KAIWN 205
>X59445-1|CAA42066.1| 222|Homo sapiens manganese superoxide
dismutase (MnSOD) protein.
Length = 222
Score = 292 bits (716), Expect = 9e-79
Identities = 130/185 (70%), Positives = 152/185 (82%), Gaps = 1/185 (0%)
Frame = +3
Query: 159 SRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAKGDIDTI 338
SRQKH+LP+LPY+Y ALEP I+ +IM LHHSKHHA Y+NNLNV EEK +A AKGD+
Sbjct: 22 SRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVNEEKYQEALAKGDVTAQ 81
Query: 339 INLAPALKFNGGGHINHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVA 515
I L PALKFNGGGHINHSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV
Sbjct: 82 IALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVG 141
Query: 516 VQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYV 695
VQGSGWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+
Sbjct: 142 VQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYL 201
Query: 696 KAIFD 710
KAI++
Sbjct: 202 KAIWN 206
>X15132-1|CAA33228.1| 222|Homo sapiens protein ( Human mRNA for
manganese containing superoxide dismutase (EC
1.15.1.1). ).
Length = 222
Score = 292 bits (716), Expect = 9e-79
Identities = 130/185 (70%), Positives = 152/185 (82%), Gaps = 1/185 (0%)
Frame = +3
Query: 159 SRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAKGDIDTI 338
SRQKH+LP+LPY+Y ALEP I+ +IM LHHSKHHA Y+NNLNV EEK +A AKGD+
Sbjct: 22 SRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVNEEKYQEALAKGDVTAQ 81
Query: 339 INLAPALKFNGGGHINHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVA 515
I L PALKFNGGGHINHSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV
Sbjct: 82 IALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVG 141
Query: 516 VQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYV 695
VQGSGWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+
Sbjct: 142 VQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYL 201
Query: 696 KAIFD 710
KAI++
Sbjct: 202 KAIWN 206
>X07834-1|CAA30687.1| 222|Homo sapiens protein ( Human mRNA for
manganese superoxide dismutase (EC 1.15.1.1). ).
Length = 222
Score = 291 bits (714), Expect = 2e-78
Identities = 130/185 (70%), Positives = 151/185 (81%), Gaps = 1/185 (0%)
Frame = +3
Query: 159 SRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAKGDIDTI 338
SRQKH+LP+LPY+Y ALEP I+ +IM LHHSKHHA Y+NNLNV EEK +A AKGD+
Sbjct: 22 SRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQ 81
Query: 339 INLAPALKFNGGGHINHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVA 515
I L PALKFNGGGHINHSIFW NLSPNGG +P L +A++ DFGS+D K +L+ ASV
Sbjct: 82 IALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKLDFGSFDKFKEKLTAASVG 141
Query: 516 VQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYV 695
VQGSGWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+
Sbjct: 142 VQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYL 201
Query: 696 KAIFD 710
KAI++
Sbjct: 202 KAIWN 206
>AY280720-1|AAP34409.1| 209|Homo sapiens manganese-containing
superoxide dismutase protein.
Length = 209
Score = 291 bits (714), Expect = 2e-78
Identities = 131/198 (66%), Positives = 158/198 (79%), Gaps = 1/198 (0%)
Frame = +3
Query: 120 SQRIGSLIRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEK 299
S+++ ++ G SRQKH+LP+LPY+Y ALEP I+ +IM LHHSKHHA Y+NNLNV EEK
Sbjct: 6 SRQLAPVLGYLG-SRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEK 64
Query: 300 LAQAQAKGDIDTIINLAPALKFNGGGHINHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSW 476
+A AKGD+ L PALKFNGGGHINHSIFW NLSPNGG +P L +A+++DFGS+
Sbjct: 65 YQEALAKGDVTAQTALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSF 124
Query: 477 DNLKNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHA 656
D K +L+ ASV VQGSGWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHA
Sbjct: 125 DKFKEKLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHA 184
Query: 657 YYLQYKNVRADYVKAIFD 710
YYLQYKNVR DY+KAI++
Sbjct: 185 YYLQYKNVRPDYLKAIWN 202
>Y00985-1|CAA68791.1| 222|Homo sapiens protein ( Human mRNA for
manganese-containing superoxide dismutase. ).
Length = 222
Score = 291 bits (713), Expect = 2e-78
Identities = 129/185 (69%), Positives = 151/185 (81%), Gaps = 1/185 (0%)
Frame = +3
Query: 159 SRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAKGDIDTI 338
SRQKH+LP+LPY+Y ALEP I+ +IM LHHSKHHA Y+NNLNV EEK +A AKGD+
Sbjct: 22 SRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQ 81
Query: 339 INLAPALKFNGGGHINHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVA 515
L PALKFNGGGHINHSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV
Sbjct: 82 TALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVG 141
Query: 516 VQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYV 695
VQGSGWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+
Sbjct: 142 VQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYL 201
Query: 696 KAIFD 710
KAI++
Sbjct: 202 KAIWN 206
>X14322-1|CAA32502.1| 222|Homo sapiens Manganese superoxide
dismutase protein.
Length = 222
Score = 291 bits (713), Expect = 2e-78
Identities = 129/185 (69%), Positives = 151/185 (81%), Gaps = 1/185 (0%)
Frame = +3
Query: 159 SRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAKGDIDTI 338
SRQKH+LP+LPY+Y ALEP I+ +IM LHHSKHHA Y+NNLNV EEK +A AKGD+
Sbjct: 22 SRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQ 81
Query: 339 INLAPALKFNGGGHINHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVA 515
L PALKFNGGGHINHSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV
Sbjct: 82 TALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVG 141
Query: 516 VQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYV 695
VQGSGWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+
Sbjct: 142 VQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYL 201
Query: 696 KAIFD 710
KAI++
Sbjct: 202 KAIWN 206
>M36693-1|AAA36622.1| 222|Homo sapiens protein ( Human
manganese-containing superoxide dismutase mRNA, complete
cds. ).
Length = 222
Score = 291 bits (713), Expect = 2e-78
Identities = 129/185 (69%), Positives = 151/185 (81%), Gaps = 1/185 (0%)
Frame = +3
Query: 159 SRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAKGDIDTI 338
SRQKH+LP+LPY+Y ALEP I+ +IM LHHSKHHA Y+NNLNV EEK +A AKGD+
Sbjct: 22 SRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQ 81
Query: 339 INLAPALKFNGGGHINHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVA 515
L PALKFNGGGHINHSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV
Sbjct: 82 TALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVG 141
Query: 516 VQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYV 695
VQGSGWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+
Sbjct: 142 VQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYL 201
Query: 696 KAIFD 710
KAI++
Sbjct: 202 KAIWN 206
>AL135914-2|CAI21846.1| 161|Homo sapiens superoxide dismutase 2,
mitochondrial protein.
Length = 161
Score = 91.9 bits (218), Expect = 2e-18
Identities = 41/68 (60%), Positives = 53/68 (77%)
Frame = +3
Query: 120 SQRIGSLIRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEK 299
S+++ ++ G SRQKH+LP+LPY+Y ALEP I+ +IM LHHSKHHA Y+NNLNV EEK
Sbjct: 31 SRQLAPVLGYLG-SRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEK 89
Query: 300 LAQAQAKG 323
+A AKG
Sbjct: 90 YQEALAKG 97
>BC016934-1|AAH16934.1| 140|Homo sapiens SOD2 protein protein.
Length = 140
Score = 91.5 bits (217), Expect = 3e-18
Identities = 39/55 (70%), Positives = 46/55 (83%)
Frame = +3
Query: 159 SRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAKG 323
SRQKH+LP+LPY+Y ALEP I+ +IM LHHSKHHA Y+NNLNV EEK +A AKG
Sbjct: 22 SRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKG 76
>L34157-1|AAA83933.1| 75|Homo sapiens manganese superoxide
dismutase protein.
Length = 75
Score = 89.0 bits (211), Expect = 1e-17
Identities = 38/54 (70%), Positives = 45/54 (83%)
Frame = +3
Query: 159 SRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAK 320
SRQKH+LP+LPY+Y ALEP I+ +IM LHHSKHHA Y+NNLNV EEK +A AK
Sbjct: 22 SRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAK 75
>D83493-1|BAA18955.1| 38|Homo sapiens MnSOD precursor protein.
Length = 38
Score = 34.7 bits (76), Expect = 0.33
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +3
Query: 159 SRQKHTLPELPYEYNAL 209
SRQKH+LP+LPY+Y AL
Sbjct: 22 SRQKHSLPDLPYDYGAL 38
>U02619-1|AAA17985.1| 2109|Homo sapiens TFIIIC Box B-binding subunit
protein.
Length = 2109
Score = 31.1 bits (67), Expect = 4.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 498 STASVAVQGSGWGWLGYNKQMKKLQIATCQNQDP 599
+TA + GS W WL ++ ++K + A Q +DP
Sbjct: 1799 NTARLVAMGSAWPWLLHSVRLKDREDADIQREDP 1832
>BC044857-1|AAH44857.1| 978|Homo sapiens GTF3C1 protein protein.
Length = 978
Score = 31.1 bits (67), Expect = 4.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 498 STASVAVQGSGWGWLGYNKQMKKLQIATCQNQDP 599
+TA + GS W WL ++ ++K + A Q +DP
Sbjct: 693 NTARLVAMGSAWPWLLHSVRLKDREDADIQREDP 726
>AK131479-1|BAD18624.1| 279|Homo sapiens Da (GTF3C1). protein.
Length = 279
Score = 31.1 bits (67), Expect = 4.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 498 STASVAVQGSGWGWLGYNKQMKKLQIATCQNQDP 599
+TA + GS W WL ++ ++K + A Q +DP
Sbjct: 100 NTARLVAMGSAWPWLLHSVRLKDREDADIQREDP 133
>AC002303-1|AAB67637.1| 1857|Homo sapiens Transcription factor
(TFIIIC) alpha chain, partial protein.
Length = 1857
Score = 31.1 bits (67), Expect = 4.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 498 STASVAVQGSGWGWLGYNKQMKKLQIATCQNQDP 599
+TA + GS W WL ++ ++K + A Q +DP
Sbjct: 1547 NTARLVAMGSAWPWLLHSVRLKDREDADIQREDP 1580
>Y15635-1|CAA75729.1| 2273|Homo sapiens ABCR protein.
Length = 2273
Score = 29.9 bits (64), Expect = 9.4
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = -2
Query: 635 SEERDQSSGGLQRILVLACSYLQFLHLFVVAKPTPA*ALYCHRSCRQLIL*VIPGSKVFL 456
+EE SGG+QR L +A +++ + ++ +PT Y RS L+L G + +
Sbjct: 1056 NEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDLLLKYRSGRTIIM 1115
Query: 455 N 453
+
Sbjct: 1116 S 1116
>AF001945-1|AAC05632.1| 2273|Homo sapiens rim ABC transporter protein.
Length = 2273
Score = 29.9 bits (64), Expect = 9.4
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = -2
Query: 635 SEERDQSSGGLQRILVLACSYLQFLHLFVVAKPTPA*ALYCHRSCRQLIL*VIPGSKVFL 456
+EE SGG+QR L +A +++ + ++ +PT Y RS L+L G + +
Sbjct: 1056 NEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDLLLKYRSGRTIIM 1115
Query: 455 N 453
+
Sbjct: 1116 S 1116
>AF000148-1|AAC23915.1| 2273|Homo sapiens ATP-binding cassette
transporter protein.
Length = 2273
Score = 29.9 bits (64), Expect = 9.4
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = -2
Query: 635 SEERDQSSGGLQRILVLACSYLQFLHLFVVAKPTPA*ALYCHRSCRQLIL*VIPGSKVFL 456
+EE SGG+QR L +A +++ + ++ +PT Y RS L+L G + +
Sbjct: 1056 NEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDLLLKYRSGRTIIM 1115
Query: 455 N 453
+
Sbjct: 1116 S 1116
>AB210040-1|BAE06122.1| 2303|Homo sapiens ABCA4 variant protein
protein.
Length = 2303
Score = 29.9 bits (64), Expect = 9.4
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = -2
Query: 635 SEERDQSSGGLQRILVLACSYLQFLHLFVVAKPTPA*ALYCHRSCRQLIL*VIPGSKVFL 456
+EE SGG+QR L +A +++ + ++ +PT Y RS L+L G + +
Sbjct: 1086 NEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDLLLKYRSGRTIIM 1145
Query: 455 N 453
+
Sbjct: 1146 S 1146
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,906,458
Number of Sequences: 237096
Number of extensions: 2556433
Number of successful extensions: 5649
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 5377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5632
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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