Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt20f06
(520 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical pr... 32 0.21
Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical p... 32 0.21
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 32 0.21
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 32 0.21
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 32 0.21
AY874872-1|AAX62733.1| 1668|Caenorhabditis elegans chitin syntha... 29 2.6
AF026210-2|AAB71283.2| 1668|Caenorhabditis elegans Chitin syntha... 29 2.6
Z99709-5|CAB16860.1| 246|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical pr... 27 8.0
X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase... 27 8.0
D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosi... 27 8.0
AF077533-1|AAZ91357.1| 1126|Caenorhabditis elegans Hypothetical ... 27 8.0
AF003137-1|AAB93642.1| 294|Caenorhabditis elegans Hypothetical ... 27 8.0
>Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical
protein ZK637.1 protein.
Length = 520
Score = 32.3 bits (70), Expect = 0.21
Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +1
Query: 364 EKGSNSEKA-DFERAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILP 513
++ +SEK + A+E G+GRF L + G+ ++ M+++ +S I P
Sbjct: 58 QRSPDSEKTFTVDEAVEALGFGRFQLKLSILTGMAWMADAMEMMLLSLISP 108
>Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical
protein ZK637.1 protein.
Length = 520
Score = 32.3 bits (70), Expect = 0.21
Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +1
Query: 364 EKGSNSEKA-DFERAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILP 513
++ +SEK + A+E G+GRF L + G+ ++ M+++ +S I P
Sbjct: 58 QRSPDSEKTFTVDEAVEALGFGRFQLKLSILTGMAWMADAMEMMLLSLISP 108
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 32.3 bits (70), Expect = 0.21
Identities = 27/93 (29%), Positives = 41/93 (44%)
Frame = -3
Query: 425 PYPVSSIARSKSAFSELEPFSGSDFDFLTEGTTPSSAVLEPGPFSCRSPFTSQL*GFLGP 246
P P SS S S SG+ G+T S+ + PG S + T + P
Sbjct: 118 PVPGSSSTIGSSTPSASSSSSGTMSTI--SGSTGSTVTVVPGSSSTFASSTP-IASSSSP 174
Query: 245 GSVSTILCGRAALYGGRGDTQTSLTGGSGATNS 147
GS T+ G ++ YG + +S + G+ +TNS
Sbjct: 175 GSTVTVAPGSSSTYGSSTPSASSSSSGTMSTNS 207
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 32.3 bits (70), Expect = 0.21
Identities = 27/93 (29%), Positives = 41/93 (44%)
Frame = -3
Query: 425 PYPVSSIARSKSAFSELEPFSGSDFDFLTEGTTPSSAVLEPGPFSCRSPFTSQL*GFLGP 246
P P SS S S SG+ G+T S+ + PG S + T + P
Sbjct: 325 PVPGSSSTIGSSTPSASSSSSGTMSTI--SGSTGSTVTVVPGSSSTFASSTP-IASSSSP 381
Query: 245 GSVSTILCGRAALYGGRGDTQTSLTGGSGATNS 147
GS T+ G ++ YG + +S + G+ +TNS
Sbjct: 382 GSTVTVAPGSSSTYGSSTPSASSSSSGTMSTNS 414
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 32.3 bits (70), Expect = 0.21
Identities = 27/93 (29%), Positives = 41/93 (44%)
Frame = -3
Query: 425 PYPVSSIARSKSAFSELEPFSGSDFDFLTEGTTPSSAVLEPGPFSCRSPFTSQL*GFLGP 246
P P SS S S SG+ G+T S+ + PG S + T + P
Sbjct: 325 PVPGSSSTIGSSTPSASSSSSGTMSTI--SGSTGSTVTVVPGSSSTFASSTP-IASSSSP 381
Query: 245 GSVSTILCGRAALYGGRGDTQTSLTGGSGATNS 147
GS T+ G ++ YG + +S + G+ +TNS
Sbjct: 382 GSTVTVAPGSSSTYGSSTPSASSSSSGTMSTNS 414
>AY874872-1|AAX62733.1| 1668|Caenorhabditis elegans chitin synthase 2
protein.
Length = 1668
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/42 (28%), Positives = 17/42 (40%)
Frame = -2
Query: 261 RILGPRVSFYHPMRAGGFVWWSRGHSNVSHWGEWRYQQRIAC 136
R LG HP G VW+ + + HW + + I C
Sbjct: 887 RRLGAACGRIHPRGDGAMVWYQKFEYAIGHWLQKATEHMIGC 928
>AF026210-2|AAB71283.2| 1668|Caenorhabditis elegans Chitin synthase
protein 2 protein.
Length = 1668
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/42 (28%), Positives = 17/42 (40%)
Frame = -2
Query: 261 RILGPRVSFYHPMRAGGFVWWSRGHSNVSHWGEWRYQQRIAC 136
R LG HP G VW+ + + HW + + I C
Sbjct: 887 RRLGAACGRIHPRGDGAMVWYQKFEYAIGHWLQKATEHMIGC 928
>Z99709-5|CAB16860.1| 246|Caenorhabditis elegans Hypothetical
protein C47B2.5 protein.
Length = 246
Score = 27.9 bits (59), Expect = 4.6
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +1
Query: 400 RAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFIL 510
R EL G G +A CGL STS E+ V+ F L
Sbjct: 188 RGSELIGAGMVVNDWVAFCGLDSTSTELSVVESIFKL 224
>Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical protein
ZK1067.1 protein.
Length = 1323
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 59 TRTVHSHLKWRNAHKQQGRSTSDRHRQAIRCW 154
T ++H+ LK N Q + D +++ +RCW
Sbjct: 1093 TDSIHNFLKDGNRLSQPPNCSQDLYQELLRCW 1124
>X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase
protein.
Length = 1323
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 59 TRTVHSHLKWRNAHKQQGRSTSDRHRQAIRCW 154
T ++H+ LK N Q + D +++ +RCW
Sbjct: 1093 TDSIHNFLKDGNRLSQPPNCSQDLYQELLRCW 1124
>D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosine
kinase protein.
Length = 1374
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 59 TRTVHSHLKWRNAHKQQGRSTSDRHRQAIRCW 154
T ++H+ LK N Q + D +++ +RCW
Sbjct: 1144 TDSIHNFLKDGNRLSQPPNCSQDLYQELLRCW 1175
>AF077533-1|AAZ91357.1| 1126|Caenorhabditis elegans Hypothetical
protein F54G2.1a protein.
Length = 1126
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/62 (24%), Positives = 27/62 (43%)
Frame = -3
Query: 494 EMTSISSEVLTRPHTANSM*WKRPYPVSSIARSKSAFSELEPFSGSDFDFLTEGTTPSSA 315
++ ++ S L+ P + K YP + ++K L P F+F PS+A
Sbjct: 987 QIIALDSNGLSDPFVVIEIIPKFRYPAVPVVKTKVVSKSLNPIFDETFEFHIPPNPPSTA 1046
Query: 314 VL 309
+L
Sbjct: 1047 ML 1048
>AF003137-1|AAB93642.1| 294|Caenorhabditis elegans Hypothetical
protein C27A12.4 protein.
Length = 294
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1
Query: 238 TDPGPKNPHNCDVKGDLQLNGPGSKTAELGVVPSVKKSKS 357
TDP H+ GDL SKTAE+ V+P + + KS
Sbjct: 4 TDPSQLYNHHSVTNGDLCT----SKTAEMEVLPPIGRDKS 39
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.130 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,670,689
Number of Sequences: 27780
Number of extensions: 278904
Number of successful extensions: 754
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 753
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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