Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt20f05
(694 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical pr... 197 7e-51
AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein. 197 7e-51
Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical pr... 67 1e-11
AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein. 67 1e-11
Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical pr... 64 7e-11
AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h at... 64 7e-11
AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein ... 64 7e-11
AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein. 64 7e-11
AF016449-13|AAG24003.1| 350|Caenorhabditis elegans Serpentine r... 31 0.78
U29614-2|AAM54190.1| 1020|Caenorhabditis elegans Temporarily ass... 29 3.2
U29614-1|AAM54191.1| 1061|Caenorhabditis elegans Temporarily ass... 29 3.2
Z69718-2|CAA93536.1| 139|Caenorhabditis elegans Hypothetical pr... 28 5.5
AF385631-1|AAK84832.1| 671|Caenorhabditis elegans serotonin reu... 28 5.5
AF036705-2|AAM98021.1| 237|Caenorhabditis elegans Hypothetical ... 28 5.5
AF036705-1|AAB95170.1| 249|Caenorhabditis elegans Hypothetical ... 28 5.5
AC024812-6|AAF59549.2| 671|Caenorhabditis elegans Modulation of... 28 5.5
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical pr... 28 7.3
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 28 7.3
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 28 7.3
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z83238-1|CAB05792.1| 339|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z81139-7|CAI46624.1| 358|Caenorhabditis elegans Hypothetical pr... 27 9.6
U80023-15|AAG24046.1| 343|Caenorhabditis elegans Serpentine rec... 27 9.6
U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical pr... 27 9.6
AL034365-6|CAA22263.1| 347|Caenorhabditis elegans Hypothetical ... 27 9.6
AF040642-9|AAB94950.1| 589|Caenorhabditis elegans Hypothetical ... 27 9.6
AC084152-7|AAK39310.1| 172|Caenorhabditis elegans Hypothetical ... 27 9.6
>Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical
protein T01H3.1 protein.
Length = 214
Score = 197 bits (480), Expect = 7e-51
Identities = 97/189 (51%), Positives = 128/189 (67%), Gaps = 5/189 (2%)
Frame = +3
Query: 138 LYYVLNGKGEQISLGWFLENTSPYMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKA 317
L+Y+L+G+G + +GWFL +TSP+MW LGI FS++LSV+GA GI TTG SI+GGGVKA
Sbjct: 26 LFYMLSGQGHRFDIGWFLTSTSPHMWAGLGIGFSLSLSVLGAGWGIFTTGSSILGGGVKA 85
Query: 318 PRIKTKNLISVIFCEAVAIYGLITAIVLSGMLEKYSE---PFT--SVSVKQQNWMAGYVM 482
PRI+TKNL+S+IFCEAVAI+G+I A V G L ++ P T +++ +N +GY++
Sbjct: 86 PRIRTKNLVSIIFCEAVAIFGIIMAFVFVGKLAEFRREDLPDTEDGMAILARNLASGYMI 145
Query: 483 FGAGLAVGLVNLFCXXXXXXXXXXXXXXXXXXXXXFVKILIVEIFGSAIGLFGLIVGIYM 662
FG GL VGL NL C FVKILI+EIF SAIGLFG+I+GI
Sbjct: 146 FGGGLTVGLSNLVCGLAVGIVGSGAAIADAANPALFVKILIIEIFASAIGLFGMIIGIVQ 205
Query: 663 TSKVKMGNQ 689
T+K GN+
Sbjct: 206 TNKASFGNK 214
>AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein.
Length = 214
Score = 197 bits (480), Expect = 7e-51
Identities = 97/189 (51%), Positives = 128/189 (67%), Gaps = 5/189 (2%)
Frame = +3
Query: 138 LYYVLNGKGEQISLGWFLENTSPYMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKA 317
L+Y+L+G+G + +GWFL +TSP+MW LGI FS++LSV+GA GI TTG SI+GGGVKA
Sbjct: 26 LFYMLSGQGHRFDIGWFLTSTSPHMWAGLGIGFSLSLSVLGAGWGIFTTGSSILGGGVKA 85
Query: 318 PRIKTKNLISVIFCEAVAIYGLITAIVLSGMLEKYSE---PFT--SVSVKQQNWMAGYVM 482
PRI+TKNL+S+IFCEAVAI+G+I A V G L ++ P T +++ +N +GY++
Sbjct: 86 PRIRTKNLVSIIFCEAVAIFGIIMAFVFVGKLAEFRREDLPDTEDGMAILARNLASGYMI 145
Query: 483 FGAGLAVGLVNLFCXXXXXXXXXXXXXXXXXXXXXFVKILIVEIFGSAIGLFGLIVGIYM 662
FG GL VGL NL C FVKILI+EIF SAIGLFG+I+GI
Sbjct: 146 FGGGLTVGLSNLVCGLAVGIVGSGAAIADAANPALFVKILIIEIFASAIGLFGMIIGIVQ 205
Query: 663 TSKVKMGNQ 689
T+K GN+
Sbjct: 206 TNKASFGNK 214
>Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical
protein R10E11.8 protein.
Length = 169
Score = 67.3 bits (157), Expect = 1e-11
Identities = 41/150 (27%), Positives = 67/150 (44%)
Frame = +3
Query: 213 WGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITA 392
+G+LG+ ++A + G+A G G I V P + K +I V+ VAIYGL+ A
Sbjct: 25 FGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIYGLVVA 84
Query: 393 IVLSGMLEKYSEPFTSVSVKQQNWMAGYVMFGAGLAVGLVNLFCXXXXXXXXXXXXXXXX 572
+++SG +E +T + Q F GL GL L
Sbjct: 85 VIVSGKVEPAGANYTINNAFSQ--------FAGGLVCGLCGLGAGYAIGIAGDAGVRALS 136
Query: 573 XXXXXFVKILIVEIFGSAIGLFGLIVGIYM 662
FV ++++ IF +GL+G+IV + +
Sbjct: 137 QQPRMFVGMILILIFAEVLGLYGMIVALIL 166
>AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein.
Length = 169
Score = 67.3 bits (157), Expect = 1e-11
Identities = 41/150 (27%), Positives = 67/150 (44%)
Frame = +3
Query: 213 WGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITA 392
+G+LG+ ++A + G+A G G I V P + K +I V+ VAIYGL+ A
Sbjct: 25 FGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIYGLVVA 84
Query: 393 IVLSGMLEKYSEPFTSVSVKQQNWMAGYVMFGAGLAVGLVNLFCXXXXXXXXXXXXXXXX 572
+++SG +E +T + Q F GL GL L
Sbjct: 85 VIVSGKVEPAGANYTINNAFSQ--------FAGGLVCGLCGLGAGYAIGIAGDAGVRALS 136
Query: 573 XXXXXFVKILIVEIFGSAIGLFGLIVGIYM 662
FV ++++ IF +GL+G+IV + +
Sbjct: 137 QQPRMFVGMILILIFAEVLGLYGMIVALIL 166
>Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical
protein R10E11.2 protein.
Length = 161
Score = 64.5 bits (150), Expect = 7e-11
Identities = 44/150 (29%), Positives = 68/150 (45%)
Frame = +3
Query: 213 WGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITA 392
+G +G A + +V+GAA G + V I GV P + K++I VI + IYGL+ A
Sbjct: 17 FGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLVVA 76
Query: 393 IVLSGMLEKYSEPFTSVSVKQQNWMAGYVMFGAGLAVGLVNLFCXXXXXXXXXXXXXXXX 572
+VL G + TS S + G+ AGL GL L
Sbjct: 77 MVLKGKV-------TSASA-GYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTA 128
Query: 573 XXXXXFVKILIVEIFGSAIGLFGLIVGIYM 662
FV ++++ IF +GL+G+IV + +
Sbjct: 129 QQPRLFVGMILILIFSEVLGLYGMIVALIL 158
>AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h
atpase protein 3 protein.
Length = 161
Score = 64.5 bits (150), Expect = 7e-11
Identities = 44/150 (29%), Positives = 68/150 (45%)
Frame = +3
Query: 213 WGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITA 392
+G +G A + +V+GAA G + V I GV P + K++I VI + IYGL+ A
Sbjct: 17 FGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLVVA 76
Query: 393 IVLSGMLEKYSEPFTSVSVKQQNWMAGYVMFGAGLAVGLVNLFCXXXXXXXXXXXXXXXX 572
+VL G + TS S + G+ AGL GL L
Sbjct: 77 MVLKGKV-------TSASA-GYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTA 128
Query: 573 XXXXXFVKILIVEIFGSAIGLFGLIVGIYM 662
FV ++++ IF +GL+G+IV + +
Sbjct: 129 QQPRLFVGMILILIFSEVLGLYGMIVALIL 158
>AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein
protein.
Length = 161
Score = 64.5 bits (150), Expect = 7e-11
Identities = 44/150 (29%), Positives = 68/150 (45%)
Frame = +3
Query: 213 WGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITA 392
+G +G A + +V+GAA G + V I GV P + K++I VI + IYGL+ A
Sbjct: 17 FGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLVVA 76
Query: 393 IVLSGMLEKYSEPFTSVSVKQQNWMAGYVMFGAGLAVGLVNLFCXXXXXXXXXXXXXXXX 572
+VL G + TS S + G+ AGL GL L
Sbjct: 77 MVLKGKV-------TSASA-GYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTA 128
Query: 573 XXXXXFVKILIVEIFGSAIGLFGLIVGIYM 662
FV ++++ IF +GL+G+IV + +
Sbjct: 129 QQPRLFVGMILILIFSEVLGLYGMIVALIL 158
>AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein.
Length = 161
Score = 64.5 bits (150), Expect = 7e-11
Identities = 44/150 (29%), Positives = 68/150 (45%)
Frame = +3
Query: 213 WGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITA 392
+G +G A + +V+GAA G + V I GV P + K++I VI + IYGL+ A
Sbjct: 17 FGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLVVA 76
Query: 393 IVLSGMLEKYSEPFTSVSVKQQNWMAGYVMFGAGLAVGLVNLFCXXXXXXXXXXXXXXXX 572
+VL G + TS S + G+ AGL GL L
Sbjct: 77 MVLKGKV-------TSASA-GYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTA 128
Query: 573 XXXXXFVKILIVEIFGSAIGLFGLIVGIYM 662
FV ++++ IF +GL+G+IV + +
Sbjct: 129 QQPRLFVGMILILIFSEVLGLYGMIVALIL 158
>AF016449-13|AAG24003.1| 350|Caenorhabditis elegans Serpentine
receptor, class t protein8 protein.
Length = 350
Score = 31.1 bits (67), Expect = 0.78
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Frame = +3
Query: 81 YFLSYLFVLLVGLAIPIFSLYYVLNGKGEQISLGWFLENTSPYMWGTLGIAFSVA----- 245
YFL +L VL + L IP++ L VL+ + +SL + + + ++ +GI+F
Sbjct: 52 YFLCFLAVLKLNLKIPVYQLMLVLS-IFDILSLS--VNSVATGIFDIIGISFCQCPHAIF 108
Query: 246 -LSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVLS 404
L +G A + + SI+ + I K ++ +F + V L T I+ S
Sbjct: 109 FLGAIGQASWMSGSACSILLAVERCVEINPKFILERLFRKRVFCCVLATIIIYS 162
>U29614-2|AAM54190.1| 1020|Caenorhabditis elegans Temporarily
assigned gene nameprotein 279, isoform a protein.
Length = 1020
Score = 29.1 bits (62), Expect = 3.2
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 5/93 (5%)
Frame = -3
Query: 539 TNSNSTE*IHQANSESSAEHHVSRHPVLLLDGHTSKWFRIFLQHTREHDSSDQTVNGDGL 360
+N ++ Q + E +S L + + + +QHT SS T +GD
Sbjct: 188 SNDKLSDMTEQIGNNQHLEKLISEKTEKSLSDNETTLKPVPVQHTNSVGSSIGTTSGDSE 247
Query: 359 AEDDGDQIL-----SLDSRCFDTSSHYADTSSV 276
DD + SLD + TSS + +T+SV
Sbjct: 248 ISDDDQKSWSPKNESLDYQPASTSSEFTETTSV 280
>U29614-1|AAM54191.1| 1061|Caenorhabditis elegans Temporarily
assigned gene nameprotein 279, isoform b protein.
Length = 1061
Score = 29.1 bits (62), Expect = 3.2
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 5/93 (5%)
Frame = -3
Query: 539 TNSNSTE*IHQANSESSAEHHVSRHPVLLLDGHTSKWFRIFLQHTREHDSSDQTVNGDGL 360
+N ++ Q + E +S L + + + +QHT SS T +GD
Sbjct: 229 SNDKLSDMTEQIGNNQHLEKLISEKTEKSLSDNETTLKPVPVQHTNSVGSSIGTTSGDSE 288
Query: 359 AEDDGDQIL-----SLDSRCFDTSSHYADTSSV 276
DD + SLD + TSS + +T+SV
Sbjct: 289 ISDDDQKSWSPKNESLDYQPASTSSEFTETTSV 321
>Z69718-2|CAA93536.1| 139|Caenorhabditis elegans Hypothetical
protein W06D11.3 protein.
Length = 139
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = -3
Query: 383 QTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSE 222
+TV+ + + DG++I S ++ +H DTSS D G +D+ N K E
Sbjct: 82 ETVDAEN-EQQDGEKIAS-NTGDAPNITHLVDTSSSDIAGTTDSNNNNDKKTEE 133
>AF385631-1|AAK84832.1| 671|Caenorhabditis elegans serotonin
reuptake transporter protein.
Length = 671
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 87 LSYLFVLLVGLAIPIFSLYYVLNGKG 164
L + LL LAIP+F++ Y+L+G G
Sbjct: 602 LGWFLRLLSVLAIPVFAIIYLLSGTG 627
>AF036705-2|AAM98021.1| 237|Caenorhabditis elegans Hypothetical
protein F37C4.4b protein.
Length = 237
Score = 28.3 bits (60), Expect = 5.5
Identities = 21/88 (23%), Positives = 44/88 (50%)
Frame = +3
Query: 246 LSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVLSGMLEKYS 425
++ V A + + T + + G V R +T ++ ++FC A+ L+ I L+ YS
Sbjct: 92 MNTVSAIVSLLTGAMGL--GAVHRYRWRTMLILWLVFCIMSAVGSLLAVITTGIWLDHYS 149
Query: 426 EPFTSVSVKQQNWMAGYVMFGAGLAVGL 509
+ V N ++G+++ A +A+G+
Sbjct: 150 K--MKVRTAIGNGLSGFMLL-ASVALGV 174
>AF036705-1|AAB95170.1| 249|Caenorhabditis elegans Hypothetical
protein F37C4.4a protein.
Length = 249
Score = 28.3 bits (60), Expect = 5.5
Identities = 21/88 (23%), Positives = 44/88 (50%)
Frame = +3
Query: 246 LSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVLSGMLEKYS 425
++ V A + + T + + G V R +T ++ ++FC A+ L+ I L+ YS
Sbjct: 104 MNTVSAIVSLLTGAMGL--GAVHRYRWRTMLILWLVFCIMSAVGSLLAVITTGIWLDHYS 161
Query: 426 EPFTSVSVKQQNWMAGYVMFGAGLAVGL 509
+ V N ++G+++ A +A+G+
Sbjct: 162 K--MKVRTAIGNGLSGFMLL-ASVALGV 186
>AC024812-6|AAF59549.2| 671|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 5 protein.
Length = 671
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 87 LSYLFVLLVGLAIPIFSLYYVLNGKG 164
L + LL LAIP+F++ Y+L+G G
Sbjct: 602 LGWFLRLLSVLAIPVFAIIYLLSGTG 627
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 27.9 bits (59), Expect = 7.3
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +2
Query: 530 CCWYRGLWCCSSGCCQRC 583
CC R CC + CC RC
Sbjct: 95 CCCRRCCTCCRTCCCTRC 112
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 27.9 bits (59), Expect = 7.3
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +2
Query: 530 CCWYRGLWCCSSGCCQRC 583
CC R CC + CC RC
Sbjct: 93 CCCRRCCTCCRTCCCTRC 110
>Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical
protein F59B10.2 protein.
Length = 482
Score = 27.9 bits (59), Expect = 7.3
Identities = 22/89 (24%), Positives = 34/89 (38%)
Frame = -3
Query: 638 KKTNGRSKNLNDEDLDEQGSVGSIR*SSTRAHDTNSNSTE*IHQANSESSAEHHVSRHPV 459
K+ R K E S SST T+S S+ ++ SES +E VS
Sbjct: 197 KEQKARKKKEKTPTPTESSFESSSDSSSTSESSTSSESSSSASESESESKSESQVSSSKT 256
Query: 458 LLLDGHTSKWFRIFLQHTREHDSSDQTVN 372
+SK + + + SS T++
Sbjct: 257 STSKASSSKAYGSDFESEKSSSSSASTIS 285
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 27.9 bits (59), Expect = 7.3
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +2
Query: 530 CCWYRGLWCCSSGCCQRC 583
CC R CC + CC RC
Sbjct: 94 CCCRRCCTCCRTCCCTRC 111
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 27.9 bits (59), Expect = 7.3
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +2
Query: 530 CCWYRGLWCCSSGCCQRC 583
CC R CC + CC RC
Sbjct: 94 CCCRRCCTCCRTCCCTRC 111
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 27.9 bits (59), Expect = 7.3
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +2
Query: 530 CCWYRGLWCCSSGCCQRC 583
CC R CC + CC RC
Sbjct: 95 CCCRRCCTCCRTCCCTRC 112
>Z83238-1|CAB05792.1| 339|Caenorhabditis elegans Hypothetical
protein T08G3.1 protein.
Length = 339
Score = 27.5 bits (58), Expect = 9.6
Identities = 18/106 (16%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Frame = +3
Query: 210 MWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLIT 389
++ T+G+ F++ ++ A G+H+ + + P +K ++V+ ++Y
Sbjct: 46 LFSTVGVLFALLEFLLYPASGLHSHSAAYIVYINNRPFDASKEFLTVLLAVYCSLYCAAI 105
Query: 390 AIVLSGMLEKYSEPFTSVSVKQQN------WMAGYVMFGAGLAVGL 509
+++ + +Y F + +K N W+ V+ G +G+
Sbjct: 106 SLLAVQFIYRYIAVFCPIHLKYFNKCYLLIWIFYAVLIGVEWGIGI 151
>Z81139-7|CAI46624.1| 358|Caenorhabditis elegans Hypothetical
protein W05H5.5 protein.
Length = 358
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +3
Query: 54 YLNQNLKMRYFLSYLFVLLVGLAIPIFSLYYVL 152
Y++ LK+R F L++L +IP+F L+YVL
Sbjct: 50 YVHVTLKIRLFHRNLYIL----SIPVFFLWYVL 78
>U80023-15|AAG24046.1| 343|Caenorhabditis elegans Serpentine
receptor, class h protein200 protein.
Length = 343
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 39 KNSTKYLNQNLKMRYFLSYLFVLLVGLAIPIFSLYYVL 152
KN+ NL+ ++F++ L L+V L F +YVL
Sbjct: 229 KNTMSRRTFNLQRKFFITLLIQLIVPLVFFFFPSFYVL 266
>U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical
protein K07E3.1 protein.
Length = 1061
Score = 27.5 bits (58), Expect = 9.6
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = -3
Query: 560 SSTRAHDT-NSNSTE*IHQANSESSAEHHVSRHPVLLLDGHTSKWFRIFLQHTR--EHDS 390
+ HD N+N E + ++S SS H++R V +G +SK + ++ + EH
Sbjct: 309 AKNEVHDQKNTNGYENANTSSSSSSVTAHIARSTVSEEEGTSSKSEEVAIEDSSKFEHQE 368
Query: 389 SDQTVNGDGLAE 354
+V+ G E
Sbjct: 369 PSTSVDVVGYVE 380
>AL034365-6|CAA22263.1| 347|Caenorhabditis elegans Hypothetical
protein Y69E1A.6 protein.
Length = 347
Score = 27.5 bits (58), Expect = 9.6
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 2/111 (1%)
Frame = +3
Query: 57 LNQNLKMRYFLSYLFVLLVGLAIPIFSLYYVLNGKGEQISLGWFLENTSPYMWGTLGIAF 236
L+ +++M FL L++ + + I + Y+V++ G+ L + S W + +
Sbjct: 94 LSSHIQMAMFLLLLYLQVASIVCAIVTKYHVVSNIGK-------LSDRSILFWIFVIVYH 146
Query: 237 SVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTK--NLISVIFCEAVAIYGL 383
A + G VS + + IKTK N ISV E VAIY L
Sbjct: 147 GCAFVITGFF------SVSCLARQEEENLIKTKFPNAISVFTLENVAIYDL 191
>AF040642-9|AAB94950.1| 589|Caenorhabditis elegans Hypothetical
protein C50D2.2 protein.
Length = 589
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/60 (23%), Positives = 30/60 (50%)
Frame = +3
Query: 219 TLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIV 398
++G F + S+VG + S+ G+ + + N + + +A+ I+G +TAI+
Sbjct: 320 SVGALFGMTTSLVGGMFALPRCVFSMADDGLLFSSLASVNPKTQVPTQALLIFGFLTAII 379
>AC084152-7|AAK39310.1| 172|Caenorhabditis elegans Hypothetical
protein Y102A11A.7 protein.
Length = 172
Score = 27.5 bits (58), Expect = 9.6
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +2
Query: 539 YRGLWCCSSGCC 574
YR + CC+SGCC
Sbjct: 72 YRDIGCCASGCC 83
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,961,017
Number of Sequences: 27780
Number of extensions: 348158
Number of successful extensions: 1416
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1392
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -