Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt20e22
(641 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0674 - 21745321-21746223,21746229-21747608 34 0.083
10_08_1049 - 22555738-22555744,22556157-22556286,22556613-225567... 31 0.59
12_02_0669 + 21695391-21697443,21698319-21699030,21699169-21699775 31 1.0
01_05_0086 - 18009957-18010107,18010428-18010557,18010700-180108... 31 1.0
05_01_0013 - 85732-86829 30 1.4
09_04_0038 - 13996505-13996836,13997047-13997077,13997307-139974... 30 1.8
05_07_0041 + 27261968-27262145,27262160-27262717,27262814-27263589 30 1.8
03_05_0520 + 25139314-25139364,25139580-25139711,25141594-251417... 30 1.8
02_04_0185 - 20748206-20748405,20749067-20749232,20749373-207494... 29 3.1
06_01_0805 + 6043248-6043551,6043654-6043755,6044858-6044964,604... 29 4.1
03_05_0954 - 29113938-29114024,29114277-29114444,29115156-291152... 29 4.1
12_02_0385 + 18424617-18425594,18426811-18426850,18427581-184276... 28 5.5
04_03_0974 + 21367304-21369634 27 9.6
03_06_0427 - 33857008-33857137,33857224-33857258,33857966-338580... 27 9.6
03_02_0350 - 7734494-7734952,7735765-7736133 27 9.6
>12_02_0674 - 21745321-21746223,21746229-21747608
Length = 760
Score = 34.3 bits (75), Expect = 0.083
Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 5/120 (4%)
Frame = -3
Query: 615 VPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPS---EGEASFATTAVVEIAAS-V 448
VPL SS +P+T G+S+ ++ A E+ + T +P+ GE S T+ + A++
Sbjct: 459 VPLSSSTSEIPTTTGTSE--LSTASTGELPSPTVKIPTTACTGELSTPTSQIPSTASTRE 516
Query: 447 IKSTTGPLLDISTVAP-ATLVDELVSVSTVAVLPSAVTETSAATDLTFLEGVTSSFQRLT 271
+ + TG + P +T ++ S ++L S+ ++ + L T T
Sbjct: 517 LSTATGKIPSTPRTNPLSTATSKIPSTPRTSLLSSSTSKIPSTPSTCELSTATGKIPSTT 576
>10_08_1049 -
22555738-22555744,22556157-22556286,22556613-22556790,
22556990-22557099,22557234-22557349,22557707-22557968,
22558097-22558406,22558450-22558500,22558545-22558628
Length = 415
Score = 31.5 bits (68), Expect = 0.59
Identities = 28/117 (23%), Positives = 50/117 (42%)
Frame = -3
Query: 609 LGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASVIKSTTG 430
LG L PS G+ D ++ +S ++ + EI S+ ++T
Sbjct: 274 LGDYLTESPSNPGAGDILMGFLGSVIIS---FAFSMFNQRKLVRRHAAEIFTSIAVASTF 330
Query: 429 PLLDISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLEGVTSSFQRLTVLVS 259
L ST +V EL + T+++LP +T A ++ EGV +S V+++
Sbjct: 331 SLY--STAILGRVV-ELEPILTISILPRCITVALALRVVSLFEGVNTSVTAAVVVLT 384
>12_02_0669 + 21695391-21697443,21698319-21699030,21699169-21699775
Length = 1123
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +2
Query: 428 GPVVDLITDAAISTTAVVAKDASPSEGSEYVSADTSSSSAIVTIRSDEPTVDGKLINEEP 607
G + D++I+ A+ + SE ++ +++ V I D+ TVDGKL+ EP
Sbjct: 412 GNAESVAIDSSITEVKETDSIAAVEKDSEISKTESVETASSVVISEDDSTVDGKLV--EP 469
Query: 608 KGTIN 622
+++
Sbjct: 470 TASVS 474
>01_05_0086 -
18009957-18010107,18010428-18010557,18010700-18010877,
18011032-18011141,18011217-18011332,18011449-18011710,
18012345-18012660,18012685-18012927
Length = 501
Score = 30.7 bits (66), Expect = 1.0
Identities = 28/117 (23%), Positives = 51/117 (43%)
Frame = -3
Query: 609 LGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASVIKSTTG 430
LG L PS G+ D ++ +S ++ + EI S+ ++T
Sbjct: 312 LGDYLTKAPSNPGAGDVLMGFLGSVIIS---FAFSMFKQRKLVKRHAAEIFTSIAIASTF 368
Query: 429 PLLDISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLEGVTSSFQRLTVLVS 259
L ST ++ S+ T+++LP +T A + ++F EGV SS V+++
Sbjct: 369 SLY--STAILGRVIGLEPSL-TISILPRCITVALALSIVSFFEGVNSSLTAAVVVLT 422
>05_01_0013 - 85732-86829
Length = 365
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/35 (37%), Positives = 24/35 (68%)
Frame = +2
Query: 443 LITDAAISTTAVVAKDASPSEGSEYVSADTSSSSA 547
+++ +++ + DA+P+EG YVSA +SSSS+
Sbjct: 158 VVSSSSLHFLSRAPADAAPNEGRMYVSASSSSSSS 192
>09_04_0038 -
13996505-13996836,13997047-13997077,13997307-13997420,
13997546-13997686,13997787-13997851,13997943-13998039,
13998096-13998257,13998360-13998473,14001263-14001311,
14001967-14002047,14003504-14003561,14003671-14004031,
14004129-14004213,14004320-14004591,14004712-14004914,
14005419-14005494
Length = 746
Score = 29.9 bits (64), Expect = 1.8
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Frame = -3
Query: 639 AGVTSSLMVPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEI 460
A VT + P ++ P V S + I+ V ++ SLP +S +
Sbjct: 244 AKVTVPEVSPTKPMMLQKPQLVSSP--VPAISKPISVVSQATSLPRSASSS-------NV 294
Query: 459 AASVIKSTTGPLLDISTVAPATLVDELVSVSTVA-VLPSAVTETSAATDLTFLE 301
++V KS+ GPL+ T P E ++ +T A ++P AV + A+ FLE
Sbjct: 295 DSNVTKSS-GPLVVPPTSLPPPAQPETLATTTAAAIMPRAVPQARKASLARFLE 347
>05_07_0041 + 27261968-27262145,27262160-27262717,27262814-27263589
Length = 503
Score = 29.9 bits (64), Expect = 1.8
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = -3
Query: 630 TSSLMVPLGSSLISLPSTVGSSDRIVTIADEDEVSAE-TYSLPSEGEASFATTAVVEIAA 454
T+ ++ +L + + SS R + A V+A T ++ S +T A+V
Sbjct: 105 TTGVIASSTRTLATTTGVIASSTRTIAAATGSHVAAAITAAIAS------STCALVTATT 158
Query: 453 SVIKSTTGPLL-DISTVAPATLVDELVSVSTVAVLPSAVTET 331
SVI STTG L ++ A A+ L++ +T +PS T
Sbjct: 159 SVITSTTGALFATAASGAIASSTGALLAATTSGGIPSTTGST 200
>03_05_0520 +
25139314-25139364,25139580-25139711,25141594-25141731,
25143191-25143241,25143662-25143751,25143854-25144000,
25144108-25144218,25144307-25144375,25144777-25145517,
25145840-25146004,25146376-25146442,25146580-25146704,
25148714-25148983,25149065-25149199,25149316-25149497,
25149669-25149744
Length = 849
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = -3
Query: 471 VVEIAASVIKSTTGPLLDISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLT 310
V E+ +++ L D+ ++AP++LV + SVST AVL T++S AT T
Sbjct: 212 VEELYSTLPMEKVEALEDMVSLAPSSLVKGVASVSTTAVLS---TKSSVATSPT 262
>02_04_0185 -
20748206-20748405,20749067-20749232,20749373-20749471,
20749487-20749561,20749663-20749743,20750121-20750274,
20750330-20750425,20750518-20750727,20750746-20750957
Length = 430
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +2
Query: 425 KGPVVDLITDAAISTTAVVAKDASPSEGSEYVSADTSSSSAIVTIRSDEPTVDGKLINEE 604
K V + A+ + A + + V+ SS A+ T +S +P+ DG+ IN+E
Sbjct: 307 KNEVNSYTSAKALQKVKRLPASALKKDNAPDVAMKESSDGALET-QSTKPSSDGQQINKE 365
Query: 605 PKGTIND 625
P + D
Sbjct: 366 PPSVVED 372
>06_01_0805 +
6043248-6043551,6043654-6043755,6044858-6044964,
6045687-6045824,6046340-6046651
Length = 320
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +2
Query: 464 STTAVVAKDASPSEGSEYVSADTSSSSAIVTIRSDEPTVD--GKLINEEPK 610
S T V A A +E S+YVS +SSS+ + + + T+ GK + E K
Sbjct: 73 SPTYVAAATAEAAESSQYVSRGPASSSSKGAVEAMKETLSRWGKSVGETTK 123
>03_05_0954 -
29113938-29114024,29114277-29114444,29115156-29115212,
29115314-29115369,29115463-29115572,29116142-29116310,
29116418-29116742,29117378-29117442,29117541-29117712,
29118191-29118484
Length = 500
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +2
Query: 422 SKGPVVDLITDAAISTTAVVAKDASPSEGSEYVSADTSSSSAIVT 556
+K P + A + TT K A P EG V + SS A+ T
Sbjct: 241 AKAPPPPALPSAPLFTTEKSPKSAQPKEGMSAVFQEISSGKAVTT 285
>12_02_0385 +
18424617-18425594,18426811-18426850,18427581-18427636,
18428032-18428151
Length = 397
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 90 QSPNLLKAGLMTSSP*RLTQHHHH 161
+S +LL+ GL TSS +L HHHH
Sbjct: 75 ESASLLRRGLPTSS--KLPHHHHH 96
>04_03_0974 + 21367304-21369634
Length = 776
Score = 27.5 bits (58), Expect = 9.6
Identities = 26/93 (27%), Positives = 37/93 (39%)
Frame = -3
Query: 573 GSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASVIKSTTGPLLDISTVAPAT 394
G R + I+D+D S Y +S A A V AS G ++ +A
Sbjct: 193 GLRQRGLNISDDDYDSPRDYYGHGSHTSSTAAGAAVP-GASYFGYANGTATGVAPMARVA 251
Query: 393 LVDELVSVSTVAVLPSAVTETSAATDLTFLEGV 295
+ + S T L SA T+ AA D +GV
Sbjct: 252 MYKAVFSADT---LESASTDVLAAMDQAIADGV 281
>03_06_0427 -
33857008-33857137,33857224-33857258,33857966-33858046,
33858213-33858338,33858410-33858568,33858797-33858934,
33859084-33859155,33859359-33860273
Length = 551
Score = 27.5 bits (58), Expect = 9.6
Identities = 21/82 (25%), Positives = 32/82 (39%)
Frame = -3
Query: 612 PLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASVIKSTT 433
P L LP +S DED+ + EG A++ + A + S T
Sbjct: 242 PQAPKLKHLPDDRAASGGDDAEYDEDQGPGDGDETGGEGSAAYGLHDIAAFAVAFSNSPT 301
Query: 432 GPLLDISTVAPATLVDELVSVS 367
GP L + PA L + + V+
Sbjct: 302 GPTLAVEN-NPAFLALQQIKVA 322
>03_02_0350 - 7734494-7734952,7735765-7736133
Length = 275
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 126 SSP*RLTQHHHHGMLQHQNLTHRSR 200
+SP + QHHHH HQ H+ R
Sbjct: 192 ASPLQQQQHHHHQHHHHQQQQHQLR 216
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,412,814
Number of Sequences: 37544
Number of extensions: 196952
Number of successful extensions: 845
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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