Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt20e22
(641 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3 prot... 36 0.12
AF007194-1|AAC02272.1| 957|Homo sapiens mucin protein. 36 0.12
AB038784-1|BAB12118.1| 877|Homo sapiens intestinal mucin protein. 36 0.12
AB038782-1|BAB12116.1| 878|Homo sapiens intestinal mucin protein. 36 0.12
X58521-1|CAA41411.1| 522|Homo sapiens nucleoporin p62 protein. 34 0.37
BC101107-1|AAI01108.1| 522|Homo sapiens nucleoporin 62kDa protein. 34 0.37
BC101106-1|AAI01107.1| 522|Homo sapiens nucleoporin 62kDa protein. 34 0.37
BC101105-1|AAI01106.1| 522|Homo sapiens nucleoporin 62kDa protein. 34 0.37
BC095410-1|AAH95410.1| 522|Homo sapiens nucleoporin 62kDa protein. 34 0.37
BC003663-1|AAH03663.1| 522|Homo sapiens nucleoporin 62kDa protein. 34 0.37
X79198-1|CAA55790.1| 1938|Homo sapiens host cell factor protein. 33 0.65
CR541721-1|CAG46522.1| 522|Homo sapiens NUP62 protein. 33 0.65
BC101104-1|AAI01105.1| 522|Homo sapiens nucleoporin 62kDa protein. 33 0.65
BC050717-1|AAH50717.1| 522|Homo sapiens nucleoporin 62kDa protein. 33 0.65
BC014842-1|AAH14842.1| 522|Homo sapiens nucleoporin 62kDa protein. 33 0.65
U07932-1|AAA21145.1| 1093|Homo sapiens AF-17 protein. 31 2.6
BC007859-1|AAH07859.2| 303|Homo sapiens MLLT6 protein protein. 31 2.6
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr... 31 2.6
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr... 31 2.6
AF007197-1|AAB84381.1| 335|Homo sapiens mucin protein. 31 2.6
AF007193-1|AAC02271.1| 441|Homo sapiens mucin protein. 31 2.6
AB209633-1|BAD92870.1| 1089|Homo sapiens trithorax homolog protein. 31 2.6
BC126315-1|AAI26316.1| 1224|Homo sapiens MUC17 protein protein. 31 4.6
AF430017-1|AAL89737.1| 1029|Homo sapiens intestinal membrane muc... 31 4.6
AF016692-1|AAB71685.1| 648|Homo sapiens small intestinal mucin ... 31 4.6
>AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3
protein.
Length = 1217
Score = 35.9 bits (79), Expect = 0.12
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 4/120 (3%)
Frame = -3
Query: 615 VPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASVIKST 436
+P S PS+VG+S + T D + + +LP+ ++ ++ S + T
Sbjct: 378 IPTTSLRTLTPSSVGTSTSLTTTTDFPSIPTDISTLPTRTHIISSSPSIQSTETSSLVGT 437
Query: 435 TGPLLDISTVAPATLVDELVSVS----TVAVLPSAVTETSAATDLTFLEGVTSSFQRLTV 268
T P + STV + E +S ++ V+P T+T LT G +S TV
Sbjct: 438 TSPTM--STVRMTLRITENTPISSFSTSIVVIPETPTQTPPV--LTSATGTQTSPAPTTV 493
>AF007194-1|AAC02272.1| 957|Homo sapiens mucin protein.
Length = 957
Score = 35.9 bits (79), Expect = 0.12
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 4/120 (3%)
Frame = -3
Query: 615 VPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASVIKST 436
+P S PS+VG+S + T D + + +LP+ ++ ++ S + T
Sbjct: 378 IPTTSLRTLTPSSVGTSTSLTTTTDFPSIPTDISTLPTRTHIISSSPSIQSTETSSLVGT 437
Query: 435 TGPLLDISTVAPATLVDELVSVS----TVAVLPSAVTETSAATDLTFLEGVTSSFQRLTV 268
T P + STV + E +S ++ V+P T+T LT G +S TV
Sbjct: 438 TSPTM--STVRMTLRITENTPISSFSTSIVVIPETPTQTPPV--LTSATGTQTSPAPTTV 493
>AB038784-1|BAB12118.1| 877|Homo sapiens intestinal mucin protein.
Length = 877
Score = 35.9 bits (79), Expect = 0.12
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 4/120 (3%)
Frame = -3
Query: 615 VPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASVIKST 436
+P S PS+VG+S + T D + + +LP+ ++ ++ S + T
Sbjct: 38 IPTTSLRTLTPSSVGTSTSLTTTTDFPSIPTDISTLPTRTHIISSSPSIQSTETSSLVGT 97
Query: 435 TGPLLDISTVAPATLVDELVSVS----TVAVLPSAVTETSAATDLTFLEGVTSSFQRLTV 268
T P + STV + E +S ++ V+P T+T LT G +S TV
Sbjct: 98 TSPTM--STVRMTLRITENTPISSFSTSIVVIPETPTQTPPV--LTSATGTQTSPAPTTV 153
>AB038782-1|BAB12116.1| 878|Homo sapiens intestinal mucin protein.
Length = 878
Score = 35.9 bits (79), Expect = 0.12
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 4/120 (3%)
Frame = -3
Query: 615 VPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASVIKST 436
+P S PS+VG+S + T D + + +LP+ ++ ++ S + T
Sbjct: 38 IPTTSLRTLTPSSVGTSTSLTTTTDFPSIPTDISTLPTRTHIISSSPSIQSTETSSLVGT 97
Query: 435 TGPLLDISTVAPATLVDELVSVS----TVAVLPSAVTETSAATDLTFLEGVTSSFQRLTV 268
T P + STV + E +S ++ V+P T+T LT G +S TV
Sbjct: 98 TSPTM--STVRMTLRITENTPISSFSTSIVVIPETPTQTPPV--LTSATGTQTSPAPTTV 153
>X58521-1|CAA41411.1| 522|Homo sapiens nucleoporin p62 protein.
Length = 522
Score = 34.3 bits (75), Expect = 0.37
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Frame = -3
Query: 624 SLMVPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEAS-----FATTAVVEI 460
SL + ++ S +T S VT A + +SL + G AS +T A
Sbjct: 220 SLFASIATAPTSSATTGLSLCTPVTTAGAPTAGTQGFSLKAPGAASGTSTTTSTAATATA 279
Query: 459 AASVIKSTTGPLLDISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLE 301
+ STTG L++ +APA + + T P A +A++ +T+ +
Sbjct: 280 TTTTSSSTTGFALNLKPLAPAGIPSNTAAAVTAPPGPGAAAGAAASSAMTYAQ 332
>BC101107-1|AAI01108.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 34.3 bits (75), Expect = 0.37
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Frame = -3
Query: 624 SLMVPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEAS-----FATTAVVEI 460
SL + ++ S +T S VT A + +SL + G AS +T A
Sbjct: 220 SLFASIATAPTSSATTGLSLCTPVTTAGAPTAGTQGFSLKAPGAASGTSTTTSTAATATA 279
Query: 459 AASVIKSTTGPLLDISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLE 301
+ STTG L++ +APA + + T P A +A++ +T+ +
Sbjct: 280 TTTTSSSTTGFALNLKPLAPAGIPSNTAAAVTAPPGPGAAAGAAASSAMTYAQ 332
>BC101106-1|AAI01107.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 34.3 bits (75), Expect = 0.37
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Frame = -3
Query: 624 SLMVPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEAS-----FATTAVVEI 460
SL + ++ S +T S VT A + +SL + G AS +T A
Sbjct: 220 SLFASIATAPTSSATTGLSLCTPVTTAGAPTAGTQGFSLKAPGAASGTSTTTSTAATATA 279
Query: 459 AASVIKSTTGPLLDISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLE 301
+ STTG L++ +APA + + T P A +A++ +T+ +
Sbjct: 280 TTTTSSSTTGFALNLKPLAPAGIPSNTAAAVTAPPGPGAAAGAAASSAMTYAQ 332
>BC101105-1|AAI01106.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 34.3 bits (75), Expect = 0.37
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Frame = -3
Query: 624 SLMVPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEAS-----FATTAVVEI 460
SL + ++ S +T S VT A + +SL + G AS +T A
Sbjct: 220 SLFASIATAPTSSATTGLSLCTPVTTAGAPTAGTQGFSLKAPGAASGTSTTTSTAATATA 279
Query: 459 AASVIKSTTGPLLDISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLE 301
+ STTG L++ +APA + + T P A +A++ +T+ +
Sbjct: 280 TTTTSSSTTGFALNLKPLAPAGIPSNTAAAVTAPPGPGAAAGAAASSAMTYAQ 332
>BC095410-1|AAH95410.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 34.3 bits (75), Expect = 0.37
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Frame = -3
Query: 624 SLMVPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEAS-----FATTAVVEI 460
SL + ++ S +T S VT A + +SL + G AS +T A
Sbjct: 220 SLFASIATAPTSSATTGLSLCTPVTTAGAPTAGTQGFSLKAPGAASGTSTTTSTAATATA 279
Query: 459 AASVIKSTTGPLLDISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLE 301
+ STTG L++ +APA + + T P A +A++ +T+ +
Sbjct: 280 TTTTSSSTTGFALNLKPLAPAGIPSNTAAAVTAPPGPGAAAGAAASSAMTYAQ 332
>BC003663-1|AAH03663.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 34.3 bits (75), Expect = 0.37
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Frame = -3
Query: 624 SLMVPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEAS-----FATTAVVEI 460
SL + ++ S +T S VT A + +SL + G AS +T A
Sbjct: 220 SLFASIATAPTSSATTGLSLCTPVTTAGAPTAGTQGFSLKAPGAASGTSTTTSTAATATA 279
Query: 459 AASVIKSTTGPLLDISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLE 301
+ STTG L++ +APA + + T P A +A++ +T+ +
Sbjct: 280 TTTTSSSTTGFALNLKPLAPAGIPSNTAAAVTAPPGPGAAAGAAASSAMTYAQ 332
>X79198-1|CAA55790.1| 1938|Homo sapiens host cell factor protein.
Length = 1938
Score = 33.5 bits (73), Expect = 0.65
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = -3
Query: 561 RIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASV-IKSTTGPLLDISTVAPATLVD 385
R+VT V +L +G T V S + G S P T +
Sbjct: 758 RLVTPVTVSAVKPAVTTLVVKGTTGVTTLGTVTGTVSTSLAGAGGHSTSASLATPITTLG 817
Query: 384 ELVSVSTVAVLPSAVTETSAATDLTFLEGVTS 289
+ ++S+ + P+A+T ++A T LT G+T+
Sbjct: 818 TIATLSSQVINPTAITVSAAQTTLTAAGGLTT 849
>CR541721-1|CAG46522.1| 522|Homo sapiens NUP62 protein.
Length = 522
Score = 33.5 bits (73), Expect = 0.65
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Frame = -3
Query: 624 SLMVPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASVI 445
SL + ++ S +T S VT A + +SL + G AS +T A +
Sbjct: 220 SLFASIATAPTSSATTGLSLCTPVTTAGAPTAGTQGFSLKAPGAASGTSTTTSTAATATA 279
Query: 444 -----KSTTGPLLDISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLE 301
STTG L++ +APA + + T P A +A++ +T+ +
Sbjct: 280 TTTSSSSTTGFALNLKPLAPAGIPSNTAAAVTAPPGPGAAAGAAASSAMTYAQ 332
>BC101104-1|AAI01105.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 33.5 bits (73), Expect = 0.65
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Frame = -3
Query: 624 SLMVPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASVI 445
SL + ++ S +T S VT A + +SL + G AS +T A +
Sbjct: 220 SLFASIATAPTSSATTGLSLCTPVTTAGAPTAGTQGFSLKAPGAASGTSTTTSTAATATA 279
Query: 444 -----KSTTGPLLDISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLE 301
STTG L++ +APA + + T P A +A++ +T+ +
Sbjct: 280 TTTSSSSTTGFALNLKPLAPAGIPSNTAAAVTAPPGPGAAAGAAASSAMTYAQ 332
>BC050717-1|AAH50717.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 33.5 bits (73), Expect = 0.65
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Frame = -3
Query: 624 SLMVPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASVI 445
SL + ++ S +T S VT A + +SL + G AS +T A +
Sbjct: 220 SLFASIATAPTSSATTGLSLCTPVTTAGAPTAGTQGFSLKAPGAASGTSTTTSTAATATA 279
Query: 444 -----KSTTGPLLDISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLE 301
STTG L++ +APA + + T P A +A++ +T+ +
Sbjct: 280 TTTSSSSTTGFALNLKPLAPAGIPSNTAAAVTAPPGPGAAAGAAASSAMTYAQ 332
>BC014842-1|AAH14842.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 33.5 bits (73), Expect = 0.65
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Frame = -3
Query: 624 SLMVPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASVI 445
SL + ++ S +T S VT A + +SL + G AS +T A +
Sbjct: 220 SLFASIATAPTSSATTGLSLCTPVTTAGAPTAGTQGFSLKAPGAASGTSTTTSTAATATA 279
Query: 444 -----KSTTGPLLDISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLE 301
STTG L++ +APA + + T P A +A++ +T+ +
Sbjct: 280 TTTSSSSTTGFALNLKPLAPAGIPSNTAAAVTAPPGPGAAAGAAASSAMTYAQ 332
>U07932-1|AAA21145.1| 1093|Homo sapiens AF-17 protein.
Length = 1093
Score = 31.5 bits (68), Expect = 2.6
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Frame = -3
Query: 633 VTSSLMVPLGSSLIS------LPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTA 472
++SSL+ P G+S + ST+ SS ++ ++ T+SLPS A
Sbjct: 575 LSSSLLGPPGTSALPRLSRSPFTSTLPSSSASISTTQVFSLAGSTFSLPSTHIFGTPMGA 634
Query: 471 VVEIAASVIKSTTGP-LLDISTVAPATLVDE-LVSVSTVAVLPSAVTETSAA 322
V + + S T P L D S T E L S+S ++ LP+ +T++A
Sbjct: 635 VNPLLSQAESSHTEPDLEDCSFRCRGTSPQESLSSMSPISSLPALFDQTASA 686
>BC007859-1|AAH07859.2| 303|Homo sapiens MLLT6 protein protein.
Length = 303
Score = 31.5 bits (68), Expect = 2.6
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Frame = -3
Query: 633 VTSSLMVPLGSSLIS------LPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTA 472
++SSL+ P G+S + ST+ SS ++ ++ T+SLPS A
Sbjct: 29 LSSSLLGPPGTSALPRLSRSPFTSTLPSSSASISTTQVFSLAGSTFSLPSTHIFGTPMGA 88
Query: 471 VVEIAASVIKSTTGP-LLDISTVAPATLVDE-LVSVSTVAVLPSAVTETSAA 322
V + + S T P L D S T E L S+S ++ LP+ +T++A
Sbjct: 89 VNPLLSQAESSHTEPDLEDCSFRCRGTSPQESLSSMSPISSLPALFDQTASA 140
>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
protein.
Length = 4262
Score = 31.5 bits (68), Expect = 2.6
Identities = 25/101 (24%), Positives = 40/101 (39%)
Frame = -3
Query: 633 VTSSLMVPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAA 454
V SS + L ++ + + V +S + E ++ S PSEG F + V +
Sbjct: 2173 VASSAISTLSTTPVDTSTPVTNSTEARSSPTTSEGTSMPTSTPSEGSTPFTSMPVSTMPV 2232
Query: 453 SVIKSTTGPLLDISTVAPATLVDELVSVSTVAVLPSAVTET 331
+++T + T P T E S T A S T T
Sbjct: 2233 VTSEASTLSATPVDTSTPVTTSTEATSSPTTAEGTSIPTST 2273
Score = 30.7 bits (66), Expect = 4.6
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 3/119 (2%)
Frame = -3
Query: 633 VTSSLMVPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAV--VEI 460
V SS L ++ + + V SS + + +V+ S PSEG +S T + +
Sbjct: 3529 VASSEASTLSTTPVDSNTFVTSSSQASSSPATLQVTTMRMSTPSEGSSSLTTMLLSSTYV 3588
Query: 459 AASVIKSTTGPLLDIST-VAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLEGVTSS 286
+S + + P +D ST V +T + + V LP + T + +T LT + T+S
Sbjct: 3589 TSSEASTPSTPSVDRSTPVTTSTQSNSTPTPPEVITLPMS-TPSEVSTPLTIMPVSTTS 3646
Score = 30.3 bits (65), Expect = 6.1
Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 2/110 (1%)
Frame = -3
Query: 633 VTSSLMVPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAA 454
V SS L ++ + + V +S + EV++ S PSEG + +V +
Sbjct: 464 VASSEASNLSTTPVDSKTQVTTSTEASSSPPTAEVNSMPTSTPSEGSTPLTSMSVSTMPV 523
Query: 453 SVIKSTTGPLLDISTVAPATLVDELVSVSTVAVLPSAVTET--SAATDLT 310
+ +++T + T P T E S ST S T T +T LT
Sbjct: 524 ASSEASTLSTTPVDTSTPVTTSSEASSSSTTPEGTSIPTSTPSEGSTPLT 573
>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
protein.
Length = 4493
Score = 31.5 bits (68), Expect = 2.6
Identities = 25/101 (24%), Positives = 40/101 (39%)
Frame = -3
Query: 633 VTSSLMVPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAA 454
V SS + L ++ + + V +S + E ++ S PSEG F + V +
Sbjct: 2173 VASSAISTLSTTPVDTSTPVTNSTEARSSPTTSEGTSMPTSTPSEGSTPFTSMPVSTMPV 2232
Query: 453 SVIKSTTGPLLDISTVAPATLVDELVSVSTVAVLPSAVTET 331
+++T + T P T E S T A S T T
Sbjct: 2233 VTSEASTLSATPVDTSTPVTTSTEATSSPTTAEGTSIPTST 2273
Score = 30.7 bits (66), Expect = 4.6
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 3/119 (2%)
Frame = -3
Query: 633 VTSSLMVPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAV--VEI 460
V SS L ++ + + V SS + + +V+ S PSEG +S T + +
Sbjct: 3529 VASSEASTLSTTPVDSNTFVTSSSQASSSPATLQVTTMRMSTPSEGSSSLTTMLLSSTYV 3588
Query: 459 AASVIKSTTGPLLDIST-VAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLEGVTSS 286
+S + + P +D ST V +T + + V LP + T + +T LT + T+S
Sbjct: 3589 TSSEASTPSTPSVDRSTPVTTSTQSNSTPTPPEVITLPMS-TPSEVSTPLTIMPVSTTS 3646
Score = 30.3 bits (65), Expect = 6.1
Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 2/110 (1%)
Frame = -3
Query: 633 VTSSLMVPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAA 454
V SS L ++ + + V +S + EV++ S PSEG + +V +
Sbjct: 464 VASSEASNLSTTPVDSKTQVTTSTEASSSPPTAEVNSMPTSTPSEGSTPLTSMSVSTMPV 523
Query: 453 SVIKSTTGPLLDISTVAPATLVDELVSVSTVAVLPSAVTET--SAATDLT 310
+ +++T + T P T E S ST S T T +T LT
Sbjct: 524 ASSEASTLSTTPVDTSTPVTTSSEASSSSTTPEGTSIPTSTPSEGSTPLT 573
>AF007197-1|AAB84381.1| 335|Homo sapiens mucin protein.
Length = 335
Score = 31.5 bits (68), Expect = 2.6
Identities = 26/115 (22%), Positives = 47/115 (40%)
Frame = -3
Query: 627 SSLMVPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASV 448
SS + G+ + S+ +S + T+ ++S ++ T+++
Sbjct: 154 SSTVATTGTGQTTFTSSTATSPKTTTLTPTSDISTGSFKTAVSSTPPI-TSSITSTYTVT 212
Query: 447 IKSTTGPLLDISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLEGVTSSF 283
+TT PL A TL SVS+ +PS TS T+ T L + ++F
Sbjct: 213 SMTTTTPL---GPTATNTLPSFTSSVSSSTPVPSTEAITSGTTNTTPLSTLVTTF 264
>AF007193-1|AAC02271.1| 441|Homo sapiens mucin protein.
Length = 441
Score = 31.5 bits (68), Expect = 2.6
Identities = 26/115 (22%), Positives = 47/115 (40%)
Frame = -3
Query: 627 SSLMVPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASV 448
SS + G+ + S+ +S + T+ ++S ++ T+++
Sbjct: 188 SSTVATTGTGQTTFTSSTATSPKTTTLTPTSDISTGSFKTAVSSTPPI-TSSITSTYTVT 246
Query: 447 IKSTTGPLLDISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLEGVTSSF 283
+TT PL A TL SVS+ +PS TS T+ T L + ++F
Sbjct: 247 SMTTTTPL---GPTATNTLPSFTSSVSSSTPVPSTEAITSGTTNTTPLSTLVTTF 298
>AB209633-1|BAD92870.1| 1089|Homo sapiens trithorax homolog protein.
Length = 1089
Score = 31.5 bits (68), Expect = 2.6
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Frame = -3
Query: 633 VTSSLMVPLGSSLIS------LPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTA 472
++SSL+ P G+S + ST+ SS ++ ++ T+SLPS A
Sbjct: 571 LSSSLLGPPGTSALPRLSRSPFTSTLPSSSASISTTQVFSLAGSTFSLPSTHIFGTPMGA 630
Query: 471 VVEIAASVIKSTTGP-LLDISTVAPATLVDE-LVSVSTVAVLPSAVTETSAA 322
V + + S T P L D S T E L S+S ++ LP+ +T++A
Sbjct: 631 VNPLLSQAESSHTEPDLEDCSFRCRGTSPQESLSSMSPISSLPALFDQTASA 682
>BC126315-1|AAI26316.1| 1224|Homo sapiens MUC17 protein protein.
Length = 1224
Score = 30.7 bits (66), Expect = 4.6
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 3/119 (2%)
Frame = -3
Query: 633 VTSSLMVPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAV--VEI 460
V SS L ++ + + V SS + + +V+ S PSEG +S T + +
Sbjct: 260 VASSEASTLSTTPVDSNTFVTSSSQASSSPATLQVTTMRMSTPSEGSSSLTTMLLSSTYV 319
Query: 459 AASVIKSTTGPLLDIST-VAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLEGVTSS 286
+S + + P +D ST V +T + + V LP + T + +T LT + T+S
Sbjct: 320 TSSEASTPSTPSVDRSTPVTTSTQSNSTPTPPEVITLPMS-TPSEVSTPLTIMPVSTTS 377
>AF430017-1|AAL89737.1| 1029|Homo sapiens intestinal membrane mucin
MUC17 protein.
Length = 1029
Score = 30.7 bits (66), Expect = 4.6
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 3/119 (2%)
Frame = -3
Query: 633 VTSSLMVPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAV--VEI 460
V SS L ++ + + V SS + + +V+ S PSEG +S T + +
Sbjct: 65 VASSEASTLSTTPVDSNTFVTSSSQASSSPATLQVTTMRMSTPSEGSSSLTTMLLSSTYV 124
Query: 459 AASVIKSTTGPLLDIST-VAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLEGVTSS 286
+S + + P +D ST V +T + + V LP + T + +T LT + T+S
Sbjct: 125 TSSEASTPSTPSVDRSTPVTTSTQSNSTPTPPEVITLPMS-TPSEVSTPLTIMPVSTTS 182
>AF016692-1|AAB71685.1| 648|Homo sapiens small intestinal mucin
MUC3 protein.
Length = 648
Score = 30.7 bits (66), Expect = 4.6
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 3/119 (2%)
Frame = -3
Query: 633 VTSSLMVPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAV--VEI 460
V SS L ++ + + V SS + + +V+ S PSEG +S T + +
Sbjct: 65 VASSEASTLSTTPVDSNTFVTSSSQASSSPATLQVTTMRMSTPSEGSSSLTTMLLSSTYV 124
Query: 459 AASVIKSTTGPLLDIST-VAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLEGVTSS 286
+S + + P +D ST V +T + + V LP + T + +T LT + T+S
Sbjct: 125 TSSEASTPSTPSVDRSTPVTTSTQSNSTPTPPEVITLPMS-TPSEVSTPLTIMPVSTTS 182
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,461,875
Number of Sequences: 237096
Number of extensions: 1051273
Number of successful extensions: 2877
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2866
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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