Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt20e19
(639 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024881-3|AAK71413.1| 306|Caenorhabditis elegans Serpentine re... 33 0.23
U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to tran... 31 0.53
U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to tran... 31 0.53
Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z83244-6|CAD18877.1| 502|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z83244-5|CAB54315.1| 568|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z81119-4|CAB03335.2| 389|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical p... 29 2.1
AL021503-1|CAA16420.2| 309|Caenorhabditis elegans Hypothetical ... 29 2.1
Z92826-1|CAB07320.1| 263|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z49127-8|CAD56567.1| 183|Caenorhabditis elegans Hypothetical pr... 28 4.9
AL031627-13|CAA20964.1| 304|Caenorhabditis elegans Hypothetical... 28 4.9
Z81048-9|CAI79126.1| 560|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z81048-8|CAB51463.1| 602|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z79639-6|CAB01919.3| 957|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z79639-5|CAD42645.2| 972|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z79598-9|CAB01869.3| 957|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z79598-8|CAD42646.2| 972|Caenorhabditis elegans Hypothetical pr... 28 6.5
AL031627-15|CAA20966.1| 318|Caenorhabditis elegans Hypothetical... 28 6.5
AF519110-1|AAM74224.1| 957|Caenorhabditis elegans EOR-2B protein. 28 6.5
AF519109-1|AAM74223.1| 972|Caenorhabditis elegans EOR-2A protein. 28 6.5
AF502570-1|AAM74152.1| 972|Caenorhabditis elegans EOR-2 protein. 28 6.5
AF039570-1|AAC00000.1| 602|Caenorhabditis elegans aryl hydrocar... 28 6.5
>AC024881-3|AAK71413.1| 306|Caenorhabditis elegans Serpentine
receptor, class sx protein6 protein.
Length = 306
Score = 32.7 bits (71), Expect = 0.23
Identities = 21/104 (20%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +1
Query: 289 VILTHCVTLFLTAIML-VGTLREKPHLMRPWLVWMSVQIMIYVLMFVFWTTTNMVSHMGD 465
++ + +TL + I++ + +++ W V +QI + + + ++ + S
Sbjct: 173 ILFLNLLTLIVFLILIRIFYAKDQAKRGDSWKVMKRLQISVVIFVCSWFIAQSANSVFIA 232
Query: 466 TSMLGYALEFLTLLIRFYMLVLVA-SYYDLLEKDREYGERLKSL 594
+ G FL + F++L+ + S+Y ++ K +EY + KSL
Sbjct: 233 LGITGETFNFLVANVSFFVLLSFSQSFYVIIWKSKEYRQHFKSL 276
>U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform a
protein.
Length = 428
Score = 31.5 bits (68), Expect = 0.53
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 459 HMTDHVSCGPKHEHENVDHDLHRHPHQPRTH 367
H DH G H H++ HD H H H H
Sbjct: 363 HSHDHNDHGHSHGHDDHGHDSHGHSHDHNEH 393
>U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform b
protein.
Length = 446
Score = 31.5 bits (68), Expect = 0.53
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 459 HMTDHVSCGPKHEHENVDHDLHRHPHQPRTH 367
H DH G H H++ HD H H H H
Sbjct: 381 HSHDHNDHGHSHGHDDHGHDSHGHSHDHNEH 411
>Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical
protein W06F12.2a protein.
Length = 562
Score = 31.1 bits (67), Expect = 0.70
Identities = 23/97 (23%), Positives = 42/97 (43%)
Frame = +1
Query: 256 EGVLTYGVLATVILTHCVTLFLTAIMLVGTLREKPHLMRPWLVWMSVQIMIYVLMFVFWT 435
EG+ VL + V F +A M+ G +L+ PW M I+ + + W
Sbjct: 74 EGLFVIQVLCLIAAFFLV--FASAAMIYGIHTWSKYLVWPWFPVMLSSILATLAYCIMWW 131
Query: 436 TTNMVSHMGDTSMLGYALEFLTLLIRFYMLVLVASYY 546
++ S+ ++ +E + + I Y +V+V YY
Sbjct: 132 CGDVRSYWLAITI----IEIIVVFINIYCVVVVMMYY 164
>Z83244-6|CAD18877.1| 502|Caenorhabditis elegans Hypothetical
protein W06F12.2c protein.
Length = 502
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/78 (23%), Positives = 36/78 (46%)
Frame = +1
Query: 313 LFLTAIMLVGTLREKPHLMRPWLVWMSVQIMIYVLMFVFWTTTNMVSHMGDTSMLGYALE 492
+F +A M+ G +L+ PW M I+ + + W ++ S+ ++ +E
Sbjct: 97 VFASAAMIYGIHTWSKYLVWPWFPVMLSSILATLAYCIMWWCGDVRSYWLAITI----IE 152
Query: 493 FLTLLIRFYMLVLVASYY 546
+ + I Y +V+V YY
Sbjct: 153 IIVVFINIYCVVVVMMYY 170
>Z83244-5|CAB54315.1| 568|Caenorhabditis elegans Hypothetical
protein W06F12.2b protein.
Length = 568
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/78 (23%), Positives = 36/78 (46%)
Frame = +1
Query: 313 LFLTAIMLVGTLREKPHLMRPWLVWMSVQIMIYVLMFVFWTTTNMVSHMGDTSMLGYALE 492
+F +A M+ G +L+ PW M I+ + + W ++ S+ ++ +E
Sbjct: 97 VFASAAMIYGIHTWSKYLVWPWFPVMLSSILATLAYCIMWWCGDVRSYWLAITI----IE 152
Query: 493 FLTLLIRFYMLVLVASYY 546
+ + I Y +V+V YY
Sbjct: 153 IIVVFINIYCVVVVMMYY 170
>Z81119-4|CAB03335.2| 389|Caenorhabditis elegans Hypothetical
protein T10H4.5 protein.
Length = 389
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/85 (17%), Positives = 39/85 (45%)
Frame = +1
Query: 298 THCVTLFLTAIMLVGTLREKPHLMRPWLVWMSVQIMIYVLMFVFWTTTNMVSHMGDTSML 477
T+C+ + V L + RP VW+++ + + + VF+ +N + +
Sbjct: 104 TNCLRGDFVQVTSVNILNIFVQMARPTAVWLAMMMALIRTLSVFFPMSNWIQKLAKAKT- 162
Query: 478 GYALEFLTLLIRFYMLVLVASYYDL 552
A+ + ++ F++L + Y+++
Sbjct: 163 --AILIVLIMFTFWILYYSSPYFEM 185
>Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical
protein F26E4.11 protein.
Length = 564
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +1
Query: 304 CVTLFLTAIMLVGTLREKPHLMRPWLVWMSVQIMIYVLMFVFWTTTNMVSHMGDTSMLG- 480
C L + V +K H + PW++W + + L F+ T + H+ + G
Sbjct: 127 CYVLLTIVYLSVVIGPQKGHRVMPWMIWGGICAFLSHLQFI---TCQRLKHISPSCDRGS 183
Query: 481 YALEFLTLLIRFYMLVL 531
+ FL+L + F + +
Sbjct: 184 QKISFLSLFLFFVSIAM 200
>Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical
protein F26E4.11 protein.
Length = 564
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +1
Query: 304 CVTLFLTAIMLVGTLREKPHLMRPWLVWMSVQIMIYVLMFVFWTTTNMVSHMGDTSMLG- 480
C L + V +K H + PW++W + + L F+ T + H+ + G
Sbjct: 127 CYVLLTIVYLSVVIGPQKGHRVMPWMIWGGICAFLSHLQFI---TCQRLKHISPSCDRGS 183
Query: 481 YALEFLTLLIRFYMLVL 531
+ FL+L + F + +
Sbjct: 184 QKISFLSLFLFFVSIAM 200
>AL021503-1|CAA16420.2| 309|Caenorhabditis elegans Hypothetical
protein Y68A4A.2 protein.
Length = 309
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 400 IMIYVLMFVFWTTTNMVSHMGDTSMLGYAL-EFLTLLIRFYMLVLVASYYDLL 555
I+IY ++ F+ TN V+H D M Y + +++ LV V++ ++ +
Sbjct: 35 IIIYTILLPFYLFTNKVNHKRDNEMFIYPITAHFCQMVKVSYLVFVSACFNFI 87
>Z92826-1|CAB07320.1| 263|Caenorhabditis elegans Hypothetical
protein C18D11.1 protein.
Length = 263
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +1
Query: 271 YGVLATVILTHCVTLFLTAIMLVGTLREKPHLMRPWLVWMSVQIM--IYVLMFVFWTTTN 444
Y L IL + + + ++L+G L+ PW M + I+ + F+FW +
Sbjct: 108 YVSLVIDILLYVSLVLASIVLLIGLCSYNQWLLLPWAFLMIIDIVRGFISVFFIFWYSYG 167
Query: 445 MVSHMGDTSMLGYALEFL 498
++ + T + L+FL
Sbjct: 168 NLARIA-TGIFFLGLQFL 184
>Z49127-8|CAD56567.1| 183|Caenorhabditis elegans Hypothetical
protein F13D12.10 protein.
Length = 183
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = +1
Query: 277 VLATVILTHCVTLFLTAIMLVGTLREKPHLMRPWLVWMSVQIMIYVLMFVFWTTTNMVS 453
V A + H +LF T ++G R LM PWL + + + + V W ++S
Sbjct: 52 VFAAIFTFH--SLF-TTFYIIGAFRLVECLMVPWLTLQLIFLTTFAMFVVVWWIATLLS 107
>AL031627-13|CAA20964.1| 304|Caenorhabditis elegans Hypothetical
protein Y102A5C.23 protein.
Length = 304
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 400 IMIYVLMFVFWTTTNMVSHMGDTSMLGYAL--EFLTLLIRFYMLVLV 534
I+IY ++ F+ N V+H D +L Y + F ++I +Y++ ++
Sbjct: 34 IIIYTIVLPFYICANKVNHERDKEILIYPITKHFYHMVIIYYLIFVL 80
>Z81048-9|CAI79126.1| 560|Caenorhabditis elegans Hypothetical
protein C41G7.5b protein.
Length = 560
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -2
Query: 104 SIEKGRLVYIVYKRIGTKFMKKYFVQSQTSQF 9
+I+ G +VY+ + TK + YFVQS F
Sbjct: 296 AIKNGSSGLLVYRLVSTKTRRTYFVQSSCRMF 327
>Z81048-8|CAB51463.1| 602|Caenorhabditis elegans Hypothetical
protein C41G7.5a protein.
Length = 602
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -2
Query: 104 SIEKGRLVYIVYKRIGTKFMKKYFVQSQTSQF 9
+I+ G +VY+ + TK + YFVQS F
Sbjct: 338 AIKNGSSGLLVYRLVSTKTRRTYFVQSSCRMF 369
>Z79639-6|CAB01919.3| 957|Caenorhabditis elegans Hypothetical
protein C44H4.7b protein.
Length = 957
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 471 RRVAHMTDHVSCGPKHEHENVDHDLH 394
RRV H D SC K EN+ D+H
Sbjct: 839 RRVIHFFDKTSCNEKLLVENLSSDIH 864
>Z79639-5|CAD42645.2| 972|Caenorhabditis elegans Hypothetical
protein C44H4.7a protein.
Length = 972
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 471 RRVAHMTDHVSCGPKHEHENVDHDLH 394
RRV H D SC K EN+ D+H
Sbjct: 854 RRVIHFFDKTSCNEKLLVENLSSDIH 879
>Z79598-9|CAB01869.3| 957|Caenorhabditis elegans Hypothetical
protein C44H4.7b protein.
Length = 957
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 471 RRVAHMTDHVSCGPKHEHENVDHDLH 394
RRV H D SC K EN+ D+H
Sbjct: 839 RRVIHFFDKTSCNEKLLVENLSSDIH 864
>Z79598-8|CAD42646.2| 972|Caenorhabditis elegans Hypothetical
protein C44H4.7a protein.
Length = 972
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 471 RRVAHMTDHVSCGPKHEHENVDHDLH 394
RRV H D SC K EN+ D+H
Sbjct: 854 RRVIHFFDKTSCNEKLLVENLSSDIH 879
>AL031627-15|CAA20966.1| 318|Caenorhabditis elegans Hypothetical
protein Y102A5C.25 protein.
Length = 318
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +1
Query: 400 IMIYVLMFVFWTTTNMVSHMGDTSMLGYAL--EFLTLLIRFYMLVL 531
I+IY ++ F+ N V+H D +L Y + F ++I +Y++ +
Sbjct: 34 IIIYTVVLPFYIYANKVNHERDKEILIYPITNHFYKMVIVYYLIFI 79
>AF519110-1|AAM74224.1| 957|Caenorhabditis elegans EOR-2B protein.
Length = 957
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 471 RRVAHMTDHVSCGPKHEHENVDHDLH 394
RRV H D SC K EN+ D+H
Sbjct: 839 RRVIHFFDKTSCNEKLLVENLSSDIH 864
>AF519109-1|AAM74223.1| 972|Caenorhabditis elegans EOR-2A protein.
Length = 972
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 471 RRVAHMTDHVSCGPKHEHENVDHDLH 394
RRV H D SC K EN+ D+H
Sbjct: 854 RRVIHFFDKTSCNEKLLVENLSSDIH 879
>AF502570-1|AAM74152.1| 972|Caenorhabditis elegans EOR-2 protein.
Length = 972
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 471 RRVAHMTDHVSCGPKHEHENVDHDLH 394
RRV H D SC K EN+ D+H
Sbjct: 854 RRVIHFFDKTSCNEKLLVENLSSDIH 879
>AF039570-1|AAC00000.1| 602|Caenorhabditis elegans aryl hydrocarbon
receptor orthologAHR-1 protein.
Length = 602
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -2
Query: 104 SIEKGRLVYIVYKRIGTKFMKKYFVQSQTSQF 9
+I+ G +VY+ + TK + YFVQS F
Sbjct: 338 AIKNGSSGLLVYRLVSTKTRRTYFVQSSCRMF 369
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,129,851
Number of Sequences: 27780
Number of extensions: 294188
Number of successful extensions: 909
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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