Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt20e18
(635 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1762 - 39716723-39717016,39717256-39717332,39717452-397174... 31 0.58
06_01_1095 + 8984363-8984789,8985175-8985416,8985500-8985622,898... 31 0.77
04_04_0329 + 24449574-24449633,24450261-24450320,24450510-244505... 31 0.77
01_01_1034 + 8181373-8181484,8182810-8183384,8185410-8185468,818... 31 1.0
02_05_0856 - 32272757-32273494,32273578-32273866,32273961-322743... 30 1.3
01_05_0407 - 21883009-21883950 30 1.3
05_03_0231 - 10696096-10696315,10696348-10696697 30 1.8
05_06_0277 + 26885621-26886064,26886148-26886317,26887038-268879... 29 2.3
01_06_0141 - 26905855-26906928 29 2.3
05_06_0276 + 26878732-26879574,26879920-26880387,26880800-268810... 29 3.1
02_05_0912 - 32689665-32690007,32690117-32690275,32690380-326905... 29 3.1
08_02_1512 + 27627740-27629009,27629111-27629256,27629842-276301... 29 4.1
01_01_0971 + 7669209-7669446,7671259-7671446 29 4.1
01_01_0572 - 4244714-4245311,4245694-4245736,4246172-4246283,424... 29 4.1
06_03_0867 + 25534760-25539620,25540662-25540857,25540957-255411... 28 5.4
11_04_0250 + 15335457-15335882 28 7.1
10_07_0016 + 11826066-11826773 28 7.1
08_02_1459 - 27289319-27290440 28 7.1
07_03_1004 + 23244479-23244648,23245104-23245276,23245535-232456... 28 7.1
04_03_0965 - 21296608-21297165,21297332-21297682,21297781-212979... 28 7.1
02_02_0379 + 9565001-9565515,9565553-9565833,9565884-9566084,956... 28 7.1
02_01_0161 - 1123890-1124210,1124599-1124673,1124841-1124903,112... 28 7.1
>01_06_1762 -
39716723-39717016,39717256-39717332,39717452-39717498,
39717953-39718053,39718271-39718360,39718556-39720133
Length = 728
Score = 31.5 bits (68), Expect = 0.58
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 373 SDSRHQHSSPGVQGSAGGWNGAAKRERALPVRTGLAR 483
S + H H +PG QG GG G + A +R AR
Sbjct: 7 SSAPHSHGNPGKQGGGGGGGGGRGKAPAAEIRGEAAR 43
>06_01_1095 +
8984363-8984789,8985175-8985416,8985500-8985622,
8985783-8985899,8986258-8986399,8986587-8986627,
8987194-8987453,8987505-8987607,8987698-8987776,
8987856-8988115
Length = 597
Score = 31.1 bits (67), Expect = 0.77
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -1
Query: 527 PSRRKRPRTRVGDRL-RASPVRTGRARSRLAAPFQPPALPCT 405
PS++K+ + + D R V G S P +PPA PCT
Sbjct: 67 PSKKKKKKKKAADESGRWKSVPPGMRESAAPVPDEPPASPCT 108
>04_04_0329 +
24449574-24449633,24450261-24450320,24450510-24450562,
24450913-24450973,24451481-24451666,24451877-24451984,
24452196-24453418,24453571-24454405
Length = 861
Score = 31.1 bits (67), Expect = 0.77
Identities = 22/87 (25%), Positives = 33/87 (37%), Gaps = 11/87 (12%)
Frame = +2
Query: 275 QTGNESDRVKLAENRTH*AIADATHERSDLRPEVTAGINIHL-RVYKEALAAGMEPLSEN 451
+ G S L E R + + H D++ E A +HL R Y + +
Sbjct: 230 RVGVASSATALTERRALRRLLERAHAEEDIKKESVASYLLHLMRKYSSIFRSETTDFTNT 289
Query: 452 GLCLS----------ELDLHGGGHLHE 502
+C S +DLHG GH+ E
Sbjct: 290 SMCSSPSCSSRSLSSSIDLHGNGHVIE 316
>01_01_1034 +
8181373-8181484,8182810-8183384,8185410-8185468,
8185785-8185878
Length = 279
Score = 30.7 bits (66), Expect = 1.0
Identities = 26/71 (36%), Positives = 29/71 (40%)
Frame = +1
Query: 277 DRK*VRPRKIGRESHALSHSRRDSRALRLETRSDSRHQHSSPGVQGSAGGWNGAAKRERA 456
DRK + GRE A R D A R S + VQ AGGW G R R
Sbjct: 78 DRKQRGSKLHGREQRA--RRRPDLAAPRRRPGSREELRRPCDSVQLQAGGWGGGVGR-RQ 134
Query: 457 LPVRTGLARRR 489
P +T RRR
Sbjct: 135 QPSKTMRRRRR 145
>02_05_0856 -
32272757-32273494,32273578-32273866,32273961-32274312,
32275232-32275850
Length = 665
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -1
Query: 527 PSRRKRPRTRVGDRLRASPVRTGRARSRL 441
PSRR P V DR+RA + TGR R R+
Sbjct: 109 PSRRPHPPRAVVDRVRAVLLDTGRGRCRV 137
>01_05_0407 - 21883009-21883950
Length = 313
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 325 LSHSRRDSRALRLET-RSDSRHQHSSPGVQGSAGGWNGAAKRERALPVRTGLARRRSPTR 501
L S S+A R E S S + S+PG +GS+GG G++ + A A +
Sbjct: 57 LPSSSSSSKAARRERGASSSTRRRSAPGDEGSSGGVGGSSAKAAATAAAAAAATATTAAE 116
Query: 502 V 504
V
Sbjct: 117 V 117
>05_03_0231 - 10696096-10696315,10696348-10696697
Length = 189
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 524 SRRKRPRTRVGDRLRASPVRTGRARSRLAAPFQPPALPC 408
+ R +PR R RLR +G+ R R PF P + C
Sbjct: 114 THRSQPRRRRATRLRVKAQPSGQQRRRPRTPFSPWGVVC 152
>05_06_0277 +
26885621-26886064,26886148-26886317,26887038-26887941,
26888544-26888575,26888862-26888928,26889116-26889173,
26889329-26889421,26890366-26890480,26890847-26890894,
26891012-26891057,26891161-26891231,26891865-26891870,
26891991-26892038,26892439-26892488,26892892-26893154
Length = 804
Score = 29.5 bits (63), Expect = 2.3
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = +1
Query: 331 HSRRDSRALRLETRSDSRHQHSSPGVQGSAGGWNGAAKRERALPVRTGLARRRSPTRVRG 510
HSRR R+ +RS +R + S P + A+RER+ R+ RRRSP +
Sbjct: 217 HSRRSGRS---RSRSPARDRGSPPRRRSPP------ARRERSPAPRSRSPRRRSPVKTTS 267
Query: 511 RFRRLGHIKSDG 546
R ++ +G
Sbjct: 268 SHRERSPVRRNG 279
>01_06_0141 - 26905855-26906928
Length = 357
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/36 (50%), Positives = 19/36 (52%)
Frame = +1
Query: 403 GVQGSAGGWNGAAKRERALPVRTGLARRRSPTRVRG 510
G +G GG G A E A VRTG RRR RV G
Sbjct: 27 GARGDVGGGGGGAG-EAAAAVRTGGERRRRCGRVGG 61
>05_06_0276 +
26878732-26879574,26879920-26880387,26880800-26881021,
26881153-26881278,26881309-26881573,26881719-26881936
Length = 713
Score = 29.1 bits (62), Expect = 3.1
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Frame = +1
Query: 304 IGRESHALSHSRRDSRALRLETRSDSRHQHSSPGVQGSAGGWNGAAK-----RERALPVR 468
+ R H+ R SR+ + S R + SP + + K RER+ PVR
Sbjct: 5 VERREHSRRSGRSRSRSPARDRGSPPRRRERSPAARSRSPRRRSPVKSTSSHRERS-PVR 63
Query: 469 TGLARRRSPTRVRGRFRRLGHIK 537
+ RRSP R GR + +K
Sbjct: 64 RNGSPRRSPVRSIGRSPQRDRVK 86
>02_05_0912 -
32689665-32690007,32690117-32690275,32690380-32690573,
32690669-32690861,32690956-32692169
Length = 700
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -3
Query: 381 AVTSGLKSERS*VASAMA*CVRFSANFTRSDSFPV 277
AV +G K +++ AMA C F N+ R DS+P+
Sbjct: 332 AVDAGGKKKKTHWIEAMASCDMFYGNWVRDDSYPL 366
>08_02_1512 +
27627740-27629009,27629111-27629256,27629842-27630101,
27630346-27630412,27630511-27630545,27630818-27631587,
27631633-27631793
Length = 902
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 398 LRVYKEALAAGMEPLSENGLCLSELDLHGGGHLH 499
LR +L A + PL + + + ++D GGGH+H
Sbjct: 86 LRKGDHSLPAAVVPLPVDAVVIKQVDDDGGGHIH 119
>01_01_0971 + 7669209-7669446,7671259-7671446
Length = 141
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/30 (53%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = -1
Query: 479 ASPVRTGRARSRLAAPFQPPAL-PCTPGDE 393
A+PV GRAR +AAP +PP + C GDE
Sbjct: 39 ATPV-PGRARPGVAAPSRPPRIAECLIGDE 67
>01_01_0572 -
4244714-4245311,4245694-4245736,4246172-4246283,
4246462-4246551,4246625-4246787,4246909-4247015,
4247149-4247230,4247314-4247351,4247434-4247542,
4248031-4248095,4248358-4248468,4248610-4248747
Length = 551
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 479 ASPVRTGRARSRLAAPFQPPALPCTPGDEC 390
ASP + RAR ++P PPA P P D C
Sbjct: 2 ASPAK--RARPPASSPVDPPASPPAPEDPC 29
>06_03_0867 +
25534760-25539620,25540662-25540857,25540957-25541104,
25541673-25541751,25542151-25542238,25542330-25542600,
25542676-25542718,25542801-25542904,25543374-25543790
Length = 2068
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +1
Query: 361 LETRSDSRHQHSSPGVQGSAGGWNGAAKRER 453
L R S H H PG G +GG AA R R
Sbjct: 11 LHRRHYSDHHHFPPGGSGGSGGAASAAARSR 41
>11_04_0250 + 15335457-15335882
Length = 141
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 337 RRDSRALRLETRSDSRHQHSSPGVQGSAGGWNGA 438
RR LR+ R SR ++ G AGGW GA
Sbjct: 17 RRGCAVLRISDRRQSRGGPTAGGGVRRAGGWGGA 50
>10_07_0016 + 11826066-11826773
Length = 235
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1
Query: 521 RRKRPRTRVGDRLRASPVRTGRARSR 444
RR PR R+ RLR P R R+R R
Sbjct: 196 RRPPPRPRLASRLRPPPARRRRSRYR 221
>08_02_1459 - 27289319-27290440
Length = 373
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +1
Query: 379 SRHQHSSPGVQGSAGGWNG---AAKRERALPVRTGLARRRSPTRVRG 510
+R QH+ G G+AGG G AA A+P+ + L + P G
Sbjct: 17 TRQQHAQAGPVGAAGGGGGGGAAAVAMSAIPMNSWLVPKPEPVEFFG 63
>07_03_1004 +
23244479-23244648,23245104-23245276,23245535-23245638,
23245849-23246037,23246508-23248076
Length = 734
Score = 27.9 bits (59), Expect = 7.1
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +1
Query: 310 RESHALSHSRRDSRALRLE-TRSDS-RHQHSSPGVQGSAGGWNGAAKRERALPVRTGLAR 483
+ A H +D +A+R+ TRS+ +HS G S G A+ V AR
Sbjct: 69 KSRQAKPHLLKDGQAMRVGITRSEVIAIRHSRTGRAESLGAHWFLARASGVCLVFPWPAR 128
Query: 484 RRSPTRVRGRFR 519
RR P+R R FR
Sbjct: 129 RRCPSRRRSLFR 140
>04_03_0965 -
21296608-21297165,21297332-21297682,21297781-21297965,
21298076-21298172,21298859-21299071,21299206-21299334,
21299442-21299567,21301280-21301999
Length = 792
Score = 27.9 bits (59), Expect = 7.1
Identities = 23/70 (32%), Positives = 27/70 (38%), Gaps = 4/70 (5%)
Frame = +1
Query: 292 RPRKIGRESHALSHSRRDSRALRLETRSDSRHQHSSPGVQGSAGGWNG----AAKRERAL 459
RPRK S L RR ++ + RH G A G +G A R R L
Sbjct: 103 RPRKSSCISGHLDLMRRQCALMQDRRAAGGRHVRDDGGPGARAAGGDGEQGALAARRRLL 162
Query: 460 PVRTGLARRR 489
P R RRR
Sbjct: 163 PGRRRRRRRR 172
>02_02_0379 +
9565001-9565515,9565553-9565833,9565884-9566084,
9566253-9566309,9566955-9567019,9567199-9567420
Length = 446
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -1
Query: 518 RKRPRTRVGDRLRASPVRTGRARSRLAAPFQPPALPCTP 402
R PR R DRL +P + LA+P P LP P
Sbjct: 151 RLSPRWRSPDRLSITPTTAAPPATVLASPHAPMPLPDEP 189
>02_01_0161 -
1123890-1124210,1124599-1124673,1124841-1124903,
1125020-1125358
Length = 265
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 515 KRPRTRVGDRLRASPVRTGRARSRLAAPFQPPA 417
+RPRT G++ A P GR A+P P A
Sbjct: 53 RRPRTTPGEKKPAPPADVGRRHEAAASPDTPLA 85
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,909,003
Number of Sequences: 37544
Number of extensions: 283619
Number of successful extensions: 1025
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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