Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt20e18
         (635 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M23533-1|AAA51665.1|  450|Homo sapiens ZNF32 protein.                  32   2.0  
M18415-1|AAA51664.1|  450|Homo sapiens ZNF32 protein.                  32   2.0  
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.        31   3.4  
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su...    31   3.4  
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro...    31   3.4  
AB016088-1|BAA83714.1|  956|Homo sapiens RNA binding protein pro...    31   3.4  
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro...    31   3.4  
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.     31   3.4  
M74002-1|AAA35554.1|  484|Homo sapiens arginine-rich nuclear pro...    30   6.0  
BX641004-1|CAE46007.1|  332|Homo sapiens hypothetical protein pr...    30   6.0  
BC040436-1|AAH40436.1|  483|Homo sapiens splicing factor, argini...    30   6.0  
BC017359-1|AAH17359.1|  394|Homo sapiens SFRS11 protein protein.       30   6.0  
BC002784-1|AAH02784.1|  321|Homo sapiens SFRS11 protein protein.       30   6.0  
AL353771-7|CAI22336.1|  424|Homo sapiens splicing factor, argini...    30   6.0  
AL353771-6|CAI22335.1|  484|Homo sapiens splicing factor, argini...    30   6.0  
AL353771-5|CAI22334.1|  483|Homo sapiens splicing factor, argini...    30   6.0  
AL353771-4|CAI22333.1|  389|Homo sapiens splicing factor, argini...    30   6.0  

>M23533-1|AAA51665.1|  450|Homo sapiens ZNF32 protein.
          Length = 450

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 24/62 (38%), Positives = 29/62 (46%)
 Frame = +1

Query: 340 RDSRALRLETRSDSRHQHSSPGVQGSAGGWNGAAKRERALPVRTGLARRRSPTRVRGRFR 519
           RD+ AL LE  S S H    PG +    G  G  K  RA  V+ G + R +    RG  R
Sbjct: 286 RDTDALDLEESSSSDHAERPPGPRRPERGPRGKGK-ARASQVKPGDSLRGAGRGRRGSGR 344

Query: 520 RL 525
           RL
Sbjct: 345 RL 346


>M18415-1|AAA51664.1|  450|Homo sapiens ZNF32 protein.
          Length = 450

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 24/62 (38%), Positives = 29/62 (46%)
 Frame = +1

Query: 340 RDSRALRLETRSDSRHQHSSPGVQGSAGGWNGAAKRERALPVRTGLARRRSPTRVRGRFR 519
           RD+ AL LE  S S H    PG +    G  G  K  RA  V+ G + R +    RG  R
Sbjct: 286 RDTDALDLEESSSSDHAERPPGPRRPERGPRGKGK-ARASQVKPGDSLRGAGRGRRGSGR 344

Query: 520 RL 525
           RL
Sbjct: 345 RL 346


>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
          Length = 1022

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
 Frame = +1

Query: 304 IGRESHALSHSRRDSRALRLETRSDSRHQHSSPGVQGSAGGWNGAAKRERA---LPVRTG 474
           + R S + S +RR  R+         R +  +P  +G +     A +  R+    P R G
Sbjct: 631 VRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRG 690

Query: 475 LARRRSPTRVRGRFRRL 525
            +R R+P R R R R L
Sbjct: 691 RSRSRTPRRGRSRSRSL 707


>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator
           subunit SRm300 protein.
          Length = 2296

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
 Frame = +1

Query: 304 IGRESHALSHSRRDSRALRLETRSDSRHQHSSPGVQGSAGGWNGAAKRERA---LPVRTG 474
           + R S + S +RR  R+         R +  +P  +G +     A +  R+    P R G
Sbjct: 631 VRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRG 690

Query: 475 LARRRSPTRVRGRFRRL 525
            +R R+P R R R R L
Sbjct: 691 RSRSRTPRRGRSRSRSL 707


>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
           protein.
          Length = 2752

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
 Frame = +1

Query: 304 IGRESHALSHSRRDSRALRLETRSDSRHQHSSPGVQGSAGGWNGAAKRERA---LPVRTG 474
           + R S + S +RR  R+         R +  +P  +G +     A +  R+    P R G
Sbjct: 631 VRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRG 690

Query: 475 LARRRSPTRVRGRFRRL 525
            +R R+P R R R R L
Sbjct: 691 RSRSRTPRRGRSRSRSL 707


>AB016088-1|BAA83714.1|  956|Homo sapiens RNA binding protein
           protein.
          Length = 956

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
 Frame = +1

Query: 304 IGRESHALSHSRRDSRALRLETRSDSRHQHSSPGVQGSAGGWNGAAKRERA---LPVRTG 474
           + R S + S +RR  R+         R +  +P  +G +     A +  R+    P R G
Sbjct: 596 VRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRG 655

Query: 475 LARRRSPTRVRGRFRRL 525
            +R R+P R R R R L
Sbjct: 656 RSRSRTPRRGRSRSRSL 672


>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
           protein.
          Length = 1262

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
 Frame = +1

Query: 304 IGRESHALSHSRRDSRALRLETRSDSRHQHSSPGVQGSAGGWNGAAKRERA---LPVRTG 474
           + R S + S +RR  R+         R +  +P  +G +     A +  R+    P R G
Sbjct: 421 VRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRG 480

Query: 475 LARRRSPTRVRGRFRRL 525
            +R R+P R R R R L
Sbjct: 481 RSRSRTPRRGRSRSRSL 497


>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
          Length = 2800

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
 Frame = +1

Query: 304 IGRESHALSHSRRDSRALRLETRSDSRHQHSSPGVQGSAGGWNGAAKRERA---LPVRTG 474
           + R S + S +RR  R+         R +  +P  +G +     A +  R+    P R G
Sbjct: 679 VRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRG 738

Query: 475 LARRRSPTRVRGRFRRL 525
            +R R+P R R R R L
Sbjct: 739 RSRSRTPRRGRSRSRSL 755


>M74002-1|AAA35554.1|  484|Homo sapiens arginine-rich nuclear
           protein protein.
          Length = 484

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 23/64 (35%), Positives = 33/64 (51%)
 Frame = +1

Query: 331 HSRRDSRALRLETRSDSRHQHSSPGVQGSAGGWNGAAKRERALPVRTGLARRRSPTRVRG 510
           HSR  SR+ R  T S SRH+ S    +  +   + + +R ++ P      RRRS +R RG
Sbjct: 248 HSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKS-P-----RRRRSHSRERG 301

Query: 511 RFRR 522
           R  R
Sbjct: 302 RRSR 305


>BX641004-1|CAE46007.1|  332|Homo sapiens hypothetical protein
           protein.
          Length = 332

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 23/64 (35%), Positives = 33/64 (51%)
 Frame = +1

Query: 331 HSRRDSRALRLETRSDSRHQHSSPGVQGSAGGWNGAAKRERALPVRTGLARRRSPTRVRG 510
           HSR  SR+ R  T S SRH+ S    +  +   + + +R ++ P      RRRS +R RG
Sbjct: 96  HSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKS-P-----RRRRSHSRERG 149

Query: 511 RFRR 522
           R  R
Sbjct: 150 RRSR 153


>BC040436-1|AAH40436.1|  483|Homo sapiens splicing factor,
           arginine/serine-rich 11 protein.
          Length = 483

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 23/64 (35%), Positives = 33/64 (51%)
 Frame = +1

Query: 331 HSRRDSRALRLETRSDSRHQHSSPGVQGSAGGWNGAAKRERALPVRTGLARRRSPTRVRG 510
           HSR  SR+ R  T S SRH+ S    +  +   + + +R ++ P      RRRS +R RG
Sbjct: 248 HSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKS-P-----RRRRSHSRERG 301

Query: 511 RFRR 522
           R  R
Sbjct: 302 RRSR 305


>BC017359-1|AAH17359.1|  394|Homo sapiens SFRS11 protein protein.
          Length = 394

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 23/64 (35%), Positives = 33/64 (51%)
 Frame = +1

Query: 331 HSRRDSRALRLETRSDSRHQHSSPGVQGSAGGWNGAAKRERALPVRTGLARRRSPTRVRG 510
           HSR  SR+ R  T S SRH+ S    +  +   + + +R ++ P      RRRS +R RG
Sbjct: 248 HSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKS-P-----RRRRSHSRERG 301

Query: 511 RFRR 522
           R  R
Sbjct: 302 RRSR 305


>BC002784-1|AAH02784.1|  321|Homo sapiens SFRS11 protein protein.
          Length = 321

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 23/64 (35%), Positives = 33/64 (51%)
 Frame = +1

Query: 331 HSRRDSRALRLETRSDSRHQHSSPGVQGSAGGWNGAAKRERALPVRTGLARRRSPTRVRG 510
           HSR  SR+ R  T S SRH+ S    +  +   + + +R ++ P      RRRS +R RG
Sbjct: 248 HSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKS-P-----RRRRSHSRERG 301

Query: 511 RFRR 522
           R  R
Sbjct: 302 RRSR 305


>AL353771-7|CAI22336.1|  424|Homo sapiens splicing factor,
           arginine/serine-rich 11 protein.
          Length = 424

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 23/64 (35%), Positives = 33/64 (51%)
 Frame = +1

Query: 331 HSRRDSRALRLETRSDSRHQHSSPGVQGSAGGWNGAAKRERALPVRTGLARRRSPTRVRG 510
           HSR  SR+ R  T S SRH+ S    +  +   + + +R ++ P      RRRS +R RG
Sbjct: 188 HSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKS-P-----RRRRSHSRERG 241

Query: 511 RFRR 522
           R  R
Sbjct: 242 RRSR 245


>AL353771-6|CAI22335.1|  484|Homo sapiens splicing factor,
           arginine/serine-rich 11 protein.
          Length = 484

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 23/64 (35%), Positives = 33/64 (51%)
 Frame = +1

Query: 331 HSRRDSRALRLETRSDSRHQHSSPGVQGSAGGWNGAAKRERALPVRTGLARRRSPTRVRG 510
           HSR  SR+ R  T S SRH+ S    +  +   + + +R ++ P      RRRS +R RG
Sbjct: 248 HSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKS-P-----RRRRSHSRERG 301

Query: 511 RFRR 522
           R  R
Sbjct: 302 RRSR 305


>AL353771-5|CAI22334.1|  483|Homo sapiens splicing factor,
           arginine/serine-rich 11 protein.
          Length = 483

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 23/64 (35%), Positives = 33/64 (51%)
 Frame = +1

Query: 331 HSRRDSRALRLETRSDSRHQHSSPGVQGSAGGWNGAAKRERALPVRTGLARRRSPTRVRG 510
           HSR  SR+ R  T S SRH+ S    +  +   + + +R ++ P      RRRS +R RG
Sbjct: 248 HSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKS-P-----RRRRSHSRERG 301

Query: 511 RFRR 522
           R  R
Sbjct: 302 RRSR 305


>AL353771-4|CAI22333.1|  389|Homo sapiens splicing factor,
           arginine/serine-rich 11 protein.
          Length = 389

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 23/64 (35%), Positives = 33/64 (51%)
 Frame = +1

Query: 331 HSRRDSRALRLETRSDSRHQHSSPGVQGSAGGWNGAAKRERALPVRTGLARRRSPTRVRG 510
           HSR  SR+ R  T S SRH+ S    +  +   + + +R ++ P      RRRS +R RG
Sbjct: 248 HSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKS-P-----RRRRSHSRERG 301

Query: 511 RFRR 522
           R  R
Sbjct: 302 RRSR 305


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,535,018
Number of Sequences: 237096
Number of extensions: 1495338
Number of successful extensions: 6029
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 5771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6016
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)