Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt20e18
         (635 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF132148-1|AAD34736.1|  653|Drosophila melanogaster unknown prot...    30   2.3  
AE014297-3634|AAF56342.1|  653|Drosophila melanogaster CG5808-PA...    30   2.3  
AY069394-1|AAL39539.1|  299|Drosophila melanogaster LD10005p pro...    29   5.3  
AF218585-1|AAF26736.1|  299|Drosophila melanogaster tantalus pro...    29   5.3  
AE014298-1877|AAF48249.1|  398|Drosophila melanogaster CG1622-PA...    29   5.3  
AE014296-1053|AAF50710.2|  299|Drosophila melanogaster CG6586-PA...    29   5.3  
BT021423-1|AAX33571.1|  508|Drosophila melanogaster HL05615p pro...    29   7.0  
BT001857-1|AAN71619.1|  600|Drosophila melanogaster RH63753p pro...    28   9.2  

>AF132148-1|AAD34736.1|  653|Drosophila melanogaster unknown
           protein.
          Length = 653

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
 Frame = +1

Query: 265 KPQTDRK*VRPRKIGRESHALSHSRRDSRALRLETRSDSRHQHS-SPGVQGSAGGWNGAA 441
           + Q +R+  RPR+      + S  +   R  +   R+DSR  HS   G +         +
Sbjct: 476 RDQKERRRSRPREQNERRRSRSRDQTGKRPTQNRDRNDSRRFHSPQEGRRNDERSHRETS 535

Query: 442 KRERALPVRTGLARRRSPTRV 504
           + +R  P R   +R R   R+
Sbjct: 536 RNQRRSPERRQQSRNREDHRM 556


>AE014297-3634|AAF56342.1|  653|Drosophila melanogaster CG5808-PA
           protein.
          Length = 653

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
 Frame = +1

Query: 265 KPQTDRK*VRPRKIGRESHALSHSRRDSRALRLETRSDSRHQHS-SPGVQGSAGGWNGAA 441
           + Q +R+  RPR+      + S  +   R  +   R+DSR  HS   G +         +
Sbjct: 476 RDQKERRRSRPREQNERRRSRSRDQTGKRPTQNRDRNDSRRFHSPQEGRRNDERSHRETS 535

Query: 442 KRERALPVRTGLARRRSPTRV 504
           + +R  P R   +R R   R+
Sbjct: 536 RNQRRSPERRQQSRNREDHRM 556


>AY069394-1|AAL39539.1|  299|Drosophila melanogaster LD10005p
           protein.
          Length = 299

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +1

Query: 430 NGAAKRERALPVRTGLARRRSPTRV-RGRFRRL 525
           +G+++R      R G+ARRR P RV +  F R+
Sbjct: 86  SGSSRRSSTFGARAGVARRRMPARVSKDNFNRI 118


>AF218585-1|AAF26736.1|  299|Drosophila melanogaster tantalus
           protein.
          Length = 299

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +1

Query: 430 NGAAKRERALPVRTGLARRRSPTRV-RGRFRRL 525
           +G+++R      R G+ARRR P RV +  F R+
Sbjct: 86  SGSSRRSSTFGARAGVARRRMPARVSKDNFNRI 118


>AE014298-1877|AAF48249.1|  398|Drosophila melanogaster CG1622-PA
           protein.
          Length = 398

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = +1

Query: 310 RESHALSHSRRDSRALRLETRSDSRHQHSSPGVQGSAGGWNGAAK 444
           R  H   H+ R S   R  +RS SRH+      +   GG+  ++K
Sbjct: 339 RSKHKKKHNHRQSSRSRSRSRSRSRHRSERHERKRDGGGYERSSK 383


>AE014296-1053|AAF50710.2|  299|Drosophila melanogaster CG6586-PA
           protein.
          Length = 299

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +1

Query: 430 NGAAKRERALPVRTGLARRRSPTRV-RGRFRRL 525
           +G+++R      R G+ARRR P RV +  F R+
Sbjct: 86  SGSSRRSSTFGARAGVARRRMPARVSKDNFNRI 118


>BT021423-1|AAX33571.1|  508|Drosophila melanogaster HL05615p
           protein.
          Length = 508

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = +1

Query: 343 DSRALRLETRSDSRHQHSSPGVQGSAGGWNGAAKRERALPVRTGLARRRSPTRVR 507
           D+ +L  E   D+   HS+ G+  S G   GAA   R  P+RT         R+R
Sbjct: 314 DTPSLTAEPSLDAGDSHSATGISISVGAVGGAA-TARYQPIRTASVGAADGRRLR 367


>BT001857-1|AAN71619.1|  600|Drosophila melanogaster RH63753p
           protein.
          Length = 600

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 12/30 (40%), Positives = 12/30 (40%)
 Frame = +3

Query: 420 WRLEWSR*ARTGSACPNWTCTEAVTYTSPW 509
           W L W     T S C  WT T   T   PW
Sbjct: 533 WDLSWPTSWHTDSICWEWTTTPWETSWGPW 562


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,649,306
Number of Sequences: 53049
Number of extensions: 469899
Number of successful extensions: 1540
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1540
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)