Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt20e10
(704 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1773.05c |tms1||hexitol dehydrogenase |Schizosaccharomyces p... 108 9e-25
SPCC13B11.01 |adh1|adh|alcohol dehydrogenase Adh1|Schizosaccharo... 74 2e-14
SPBC1198.01 |||glutathione-dependent formaldehyde dehydrogenase ... 67 3e-12
SPBC1539.07c |||glutathione-dependent formaldehyde dehydrogenase... 58 9e-10
SPCC13B11.04c ||SPCC777.01c|glutathione-dependent formaldehyde d... 54 3e-08
SPAC24H6.12c |uba3||NEDD8 activating enzyme|Schizosaccharomyces ... 30 0.37
SPBC337.11 |||mitochondrial peptidase |Schizosaccharomyces pombe... 30 0.37
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 29 0.65
SPAC6B12.09 |trm10||tRNA m|Schizosaccharomyces pombe|chr 1|||Manual 29 0.86
SPAC1F3.10c |oct1||mitochondrial intermediate peptidase Oct1 |Sc... 27 2.0
SPBC29A10.10c |||tRNA-splicing endonuclease positive effector |S... 27 2.6
SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme Fub2|Schiz... 27 2.6
SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pomb... 27 3.5
SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 27 3.5
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 26 4.6
SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter Atm1|S... 26 4.6
>SPBC1773.05c |tms1||hexitol dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 360
Score = 108 bits (259), Expect = 9e-25
Identities = 67/206 (32%), Positives = 100/206 (48%), Gaps = 5/206 (2%)
Frame = +3
Query: 96 PLPKIENDDDVIVKVEYSGICGTDLHIVQ----GEFPASKERPLPLGHEFSGTITDVGKK 263
P + +D V V ++ +GICG+D+H + G+F K P+ LGHE +G + +VGK
Sbjct: 22 PGQTLTDDHQVKVAIKATGICGSDVHYWKEGGIGDFILKK--PMILGHESAGVVVEVGKG 79
Query: 264 -SVFRKGQKVVVDPNRACSLCDFCRKGKYQYCLTAGINSTVGIWRDGGWAQYVKVPQDQV 440
S + G V V+P C LCD+CR G+Y C +T DG Y +D
Sbjct: 80 VSSLKPGDPVAVEPGCVCRLCDYCRSGRYNLCPHMEFAATPPY--DGTLRTYYITTEDFC 137
Query: 441 YLLPDGVSTEQGGLCEPYSCVAHGYDRASPLLVGEKILIVGAGIIGNLWVTSLHQLGHRD 620
LP +S E+G L EP S H R + L G ++L++G G +G L + G D
Sbjct: 138 TKLPKQISVEEGALFEPMSVAVHAMTRGN-LKCGSRVLVMGCGTVGLLMMAVAKAYGAID 196
Query: 621 VTVSEMNKVRLEIVNKLETGYRLVTP 698
+ + + R+E K G + TP
Sbjct: 197 IVAVDASPSRVEFAQKY-VGAKPFTP 221
>SPCC13B11.01 |adh1|adh|alcohol dehydrogenase
Adh1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 350
Score = 74.1 bits (174), Expect = 2e-14
Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 5/175 (2%)
Frame = +3
Query: 120 DDVIVKVEYSGICGTDLHIVQGEFPASKERPLPLGHEFSGTITDVGKKSVFRK-GQKVVV 296
D+V+V ++Y+G+C TDLH +QG++P + PL GHE +G + VG K G +V V
Sbjct: 34 DEVLVNIKYTGVCHTDLHALQGDWPLPAKMPLIGGHEGAGVVVKVGAGVTRLKIGDRVGV 93
Query: 297 D-PNRACSLCDFCRKGKYQYCLTAGINSTVGIWRDGGWAQYVKVPQDQVYLLPDGVSTEQ 473
N +C C++C K + C ++ G DG + Y ++P+ V E
Sbjct: 94 KWMNSSCGNCEYCMKAEETICPHIQLS---GYTVDGTFQHYCIANATHATIIPESVPLEV 150
Query: 474 GG--LCEPYSCVAHGYDRASPLLVGEKILIVGA-GIIGNLWVTSLHQLGHRDVTV 629
+C +C + + S + GE I I GA G +G+L V + R V +
Sbjct: 151 AAPIMCAGITC--YRALKESKVGPGEWICIPGAGGGLGHLAVQYAKAMAMRVVAI 203
>SPBC1198.01 |||glutathione-dependent formaldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 66.9 bits (156), Expect = 3e-12
Identities = 65/231 (28%), Positives = 102/231 (44%), Gaps = 21/231 (9%)
Frame = +3
Query: 39 MEAVVFDGKTLTLKYDNKYPLPKIENDDDVIVKVEYSGIC-GTDLHIVQGEFPASKERPL 215
M+A V+DG L +K + P P I + DVIVK IC G+D HI GE P ++ +
Sbjct: 37 MKACVWDGP-LNVKIA-EVPKPTITHPKDVIVKTTACTICSGSDSHIFSGEMPGIEKGAI 94
Query: 216 PLGHEFSGTITDVGKK-SVFRKGQKVVVDPNRACSLCDFCRKGKYQYCLTAG------IN 374
LGHE G + + G + + G +VV+ + AC C FC++ +Y C T +N
Sbjct: 95 -LGHESCGIVAEKGDEVNNLEIGDRVVIAFDLACGQCSFCKRHEYAACDTTNDSKLMDVN 153
Query: 375 ------STVGIWR-----DGGWAQYVKVPQDQVYL--LPDGVSTEQGGLCEPYSCVAHGY 515
+ G + G A+Y++VP ++ LPD + +G C +
Sbjct: 154 YGSHHSAIFGYTKLLGDVPGCQAEYIRVPFAEINCCKLPDDIPDSEGLFMSDVLCTSLHA 213
Query: 516 DRASPLLVGEKILIVGAGIIGNLWVTSLHQLGHRDVTVSEMNKVRLEIVNK 668
+ G+ + I G G IG LG V E+ R+E+ +
Sbjct: 214 CTLGEVKKGDTVAIWGMGPIGLYAGRWAQILGASKVIGIEVVPERIELARQ 264
>SPBC1539.07c |||glutathione-dependent formaldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 58.4 bits (135), Expect = 9e-10
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 12/128 (9%)
Frame = +3
Query: 54 FDGKTLTLK----YDNKYPLPKIENDD-------DVIVKVEYSGICGTDLHIVQGEFPAS 200
F+GKT+T K + K PL IE+ +V VKV++S +C TD + + G P
Sbjct: 3 FEGKTITCKAAVAWGAKEPL-SIEDIQVAPPKAHEVRVKVDWSAVCHTDAYTLSGVDPEG 61
Query: 201 KERPLPLGHEFSGTITDVGKKSV-FRKGQKVVVDPNRACSLCDFCRKGKYQYCLTAGINS 377
P+ LGHE +G + +G+ + R G V++ C C FCR GK C
Sbjct: 62 AF-PIVLGHEGAGIVESIGEGVINVRPGDHVILLYTPECKECKFCRSGKTNLCSKIRETQ 120
Query: 378 TVGIWRDG 401
G+ DG
Sbjct: 121 GRGLMPDG 128
>SPCC13B11.04c ||SPCC777.01c|glutathione-dependent formaldehyde
dehydrogenase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 380
Score = 53.6 bits (123), Expect = 3e-08
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Frame = +3
Query: 123 DVIVKVEYSGICGTDLHIVQGEFPASKERPLPLGHEFSGTITDVGKK-SVFRKGQKVVVD 299
+V +K+ SG+C TD + + G+ P P+ LGHE +G + VG + + + G V+
Sbjct: 39 EVRIKIVNSGVCHTDAYTLSGKDPEGL-FPVILGHEGAGIVESVGPQVTTVQVGDPVIAL 97
Query: 300 PNRACSLCDFCRKGKYQYCLTAGINSTVGIWRDG 401
C C FC+ GK C G+ DG
Sbjct: 98 YTPECKTCKFCKSGKTNLCGRIRTTQGKGLMPDG 131
>SPAC24H6.12c |uba3||NEDD8 activating enzyme|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 444
Score = 29.9 bits (64), Expect = 0.37
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +3
Query: 546 KILIVGAGIIGNLWVTSLHQLGHRDVTVSEMNKVRLEIVNK 668
KILI+GAG +G + L G RD++V +M+ + + +N+
Sbjct: 46 KILIIGAGGLGCEILKDLALSGFRDLSVIDMDTIDITNLNR 86
>SPBC337.11 |||mitochondrial peptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 325
Score = 29.9 bits (64), Expect = 0.37
Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 2/98 (2%)
Frame = +3
Query: 375 STVGIWRDGGWAQYVKVPQDQVYLLPDGVS-TEQGGLCEPYSCVAHGYDRASPLLVGEKI 551
S + +DG A+Y +P+ +P +S TE + P++ R + +
Sbjct: 94 SELSFTKDGTHAEYCIIPEKAAVRMPSNLSFTEAASVGVPFTTAYLALSRGE-TKGSDIV 152
Query: 552 LIVGA-GIIGNLWVTSLHQLGHRDVTVSEMNKVRLEIV 662
L+VGA G +G+ G + +TVS + V
Sbjct: 153 LVVGALGAVGSAVCQIAEDWGCKVITVSRSGSTDINTV 190
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 29.1 bits (62), Expect = 0.65
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +3
Query: 6 LFEAPHKEKFKMEAVVFDGKTLTLKYDNKYPLPKIENDDDVIVKVEYSGICGTD 167
LFE H+ +K V++ T KYD K LP+ +D V ++Y G +D
Sbjct: 197 LFE--HEAVWKSN-VIYPDWNFTNKYDPKCELPRFWGEDGAPVVIDYVGCYDSD 247
>SPAC6B12.09 |trm10||tRNA m|Schizosaccharomyces pombe|chr 1|||Manual
Length = 304
Score = 28.7 bits (61), Expect = 0.86
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +3
Query: 186 EFPASKERPLPLGHEFSGTITDVGKKSVFRKGQKVVVDPNRACSLC 323
EF + KE+ + L + TIT++ + ++ G +VD NR +LC
Sbjct: 172 EFESQKEKLVYLSADSDNTITELDEDKIYIIG--AIVDKNRYKNLC 215
>SPAC1F3.10c |oct1||mitochondrial intermediate peptidase Oct1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 762
Score = 27.5 bits (58), Expect = 2.0
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 170 THCTG*VSGFQRAPPTAWSRIQWHHYG 250
T+ T SGF+ APP AW H YG
Sbjct: 652 TNVTRKFSGFESAPPAAWYLQFSHLYG 678
>SPBC29A10.10c |||tRNA-splicing endonuclease positive effector
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1944
Score = 27.1 bits (57), Expect = 2.6
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +3
Query: 18 PHKEKFKMEAVVFDGKTLTLKYDNKYPLPKIENDDDV---IVKVEYSGICGTDLHIVQ 182
PH ++ V TL +K+D + L +EN++ V ++K + DL+I++
Sbjct: 413 PHSDQSLQNKVFELHSTLAIKFDELFRLLNLENEESVEWRLIKKVFEYRLNLDLYILK 470
>SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme
Fub2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 27.1 bits (57), Expect = 2.6
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +3
Query: 546 KILIVGAGIIGNLWVTSLHQLGHRDVTVSEMNKVRLEIVNK 668
K+L+VGAG IG + +L G ++V + +++ + L +N+
Sbjct: 27 KVLLVGAGGIGCELLKNLLMSGVKEVHIIDLDTIDLSNLNR 67
>SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 2386
Score = 26.6 bits (56), Expect = 3.5
Identities = 20/81 (24%), Positives = 32/81 (39%)
Frame = +3
Query: 81 YDNKYPLPKIENDDDVIVKVEYSGICGTDLHIVQGEFPASKERPLPLGHEFSGTITDVGK 260
Y N P KIEN + + + DL + + L + EFS + D+
Sbjct: 827 YQNDVPHEKIENALRKVAMIVSQVVNDEDLSNKELLYDFFNNHILGILAEFSNILNDLKG 886
Query: 261 KSVFRKGQKVVVDPNRACSLC 323
K+ + K +V + SLC
Sbjct: 887 KTSINEKIKTIVGIEKMLSLC 907
>SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1096
Score = 26.6 bits (56), Expect = 3.5
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = -1
Query: 251 IRNGATEFVTKR*GALFGSRKLTLYNV*ISPTYPGVLHFHNDVIVVFYLRQWILVIVF*C 72
I+NG F + ++GS L +S V N+V+ FYL Q + V+++ C
Sbjct: 163 IQNGLDTFTIAKLRQVYGSNSL------VSTKKSIVTILLNEVLHPFYLFQAVSVLIWLC 216
Query: 71 QSF 63
SF
Sbjct: 217 DSF 219
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 26.2 bits (55), Expect = 4.6
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +1
Query: 502 WRTATIALPLYLSERKSSSSE-PELLVTCGSR 594
W TA IAL Y E S+ E +LLV C S+
Sbjct: 1287 WNTALIALMTYYREAAISTPELLDLLVKCESK 1318
>SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter
Atm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 693
Score = 26.2 bits (55), Expect = 4.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 329 EITEAAGSVRIHDDLLTFPE 270
EI EAA +IHD + +FPE
Sbjct: 548 EIVEAAKKAKIHDIIESFPE 567
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,132,483
Number of Sequences: 5004
Number of extensions: 68662
Number of successful extensions: 227
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 222
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 327172622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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