Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt20e10
         (704 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      26   0.40 
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   2.1  
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    22   6.5  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    22   6.5  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   8.6  

>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 25.8 bits (54), Expect = 0.40
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +3

Query: 12  EAPHKEKFKMEAVVFDGKTLTLKYDNKYPLPK 107
           + PH E+F  +   + G   T+ Y N  P P+
Sbjct: 278 DLPHLEEFDWQKPFYPGYYPTMTYSNGLPFPQ 309


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +3

Query: 12  EAPHKEKFKMEAVVFDGKTLTLKYDNKYPLPK 107
           + P+ E+F  +   + G   T+ Y N  P P+
Sbjct: 278 DLPYLEEFDWQKPFYPGYYPTMTYSNGLPFPQ 309


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 660 VNKLETGYRLVTPD 701
           V KLE+G R +TPD
Sbjct: 73  VEKLESGTRELTPD 86


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 660 VNKLETGYRLVTPD 701
           V KLE+G R +TPD
Sbjct: 73  VEKLESGTRELTPD 86


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 473 RWPMRAILLRGARLRSRFPST 535
           R   + IL +GAR R   PST
Sbjct: 333 REAFKRILTKGARARGNQPST 353


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,368
Number of Sequences: 438
Number of extensions: 4868
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)