Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt20d16
         (656 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY455866-1|AAR19767.1|  583|Drosophila melanogaster putative cho...    97   1e-20
AY102683-1|AAM27512.1|  545|Drosophila melanogaster LD23890p pro...    97   1e-20
AE013599-3906|AAS64770.1|  545|Drosophila melanogaster CG3522-PB...    97   1e-20
AE013599-3905|AAF47232.2|  583|Drosophila melanogaster CG3522-PA...    97   1e-20
AF132170-1|AAD34758.1|  286|Drosophila melanogaster unknown prot...    28   9.7  
AE014297-418|AAF51903.2|  312|Drosophila melanogaster CG1151-PA ...    28   9.7  
AE013599-2504|AAF57837.2| 2171|Drosophila melanogaster CG4903-PA...    28   9.7  

>AY455866-1|AAR19767.1|  583|Drosophila melanogaster putative
           cholesterol transporter protein.
          Length = 583

 Score = 97.5 bits (232), Expect = 1e-20
 Identities = 46/131 (35%), Positives = 75/131 (57%)
 Frame = +2

Query: 248 DEYKSQANESMANAWRIITLPNWTVEKRGSVRGDVVESRKVEGYGKVYRFTGVVNCPARF 427
           DEY     + +  A+ II   +W VEK    +GD + S + +  GK+Y+ T  +  PA+ 
Sbjct: 245 DEYTQMGLDCLRKAYEIIESSDWKVEKVNQ-KGDTIHSTQRDKIGKIYKLTARIKYPAKA 303

Query: 428 LYEEFKNNLTKLPEWNPTILKCEIIKEIGDGVDLSYQVTAGGGRGIITPRDFVILRRIAL 607
           L E+    +   P+WNP +L+ +I+++I    D++YQV+ GGG G++  RDFV LR   L
Sbjct: 304 LMEDLFYRIEDCPKWNPALLESKIVRKINSYTDITYQVSVGGGGGMVKSRDFVNLRSCRL 363

Query: 608 LSREGRVVDDN 640
               G++ DD+
Sbjct: 364 F-YNGQICDDD 373


>AY102683-1|AAM27512.1|  545|Drosophila melanogaster LD23890p
           protein.
          Length = 545

 Score = 97.5 bits (232), Expect = 1e-20
 Identities = 46/131 (35%), Positives = 75/131 (57%)
 Frame = +2

Query: 248 DEYKSQANESMANAWRIITLPNWTVEKRGSVRGDVVESRKVEGYGKVYRFTGVVNCPARF 427
           DEY     + +  A+ II   +W VEK    +GD + S + +  GK+Y+ T  +  PA+ 
Sbjct: 245 DEYTQMGLDCLRKAYEIIESSDWKVEKVNQ-KGDTIHSTQRDKIGKIYKLTARIKYPAKA 303

Query: 428 LYEEFKNNLTKLPEWNPTILKCEIIKEIGDGVDLSYQVTAGGGRGIITPRDFVILRRIAL 607
           L E+    +   P+WNP +L+ +I+++I    D++YQV+ GGG G++  RDFV LR   L
Sbjct: 304 LMEDLFYRIEDCPKWNPALLESKIVRKINSYTDITYQVSVGGGGGMVKSRDFVNLRSCRL 363

Query: 608 LSREGRVVDDN 640
               G++ DD+
Sbjct: 364 F-YNGQICDDD 373


>AE013599-3906|AAS64770.1|  545|Drosophila melanogaster CG3522-PB,
           isoform B protein.
          Length = 545

 Score = 97.5 bits (232), Expect = 1e-20
 Identities = 46/131 (35%), Positives = 75/131 (57%)
 Frame = +2

Query: 248 DEYKSQANESMANAWRIITLPNWTVEKRGSVRGDVVESRKVEGYGKVYRFTGVVNCPARF 427
           DEY     + +  A+ II   +W VEK    +GD + S + +  GK+Y+ T  +  PA+ 
Sbjct: 245 DEYTQMGLDCLRKAYEIIESSDWKVEKVNQ-KGDTIHSTQRDKIGKIYKLTARIKYPAKA 303

Query: 428 LYEEFKNNLTKLPEWNPTILKCEIIKEIGDGVDLSYQVTAGGGRGIITPRDFVILRRIAL 607
           L E+    +   P+WNP +L+ +I+++I    D++YQV+ GGG G++  RDFV LR   L
Sbjct: 304 LMEDLFYRIEDCPKWNPALLESKIVRKINSYTDITYQVSVGGGGGMVKSRDFVNLRSCRL 363

Query: 608 LSREGRVVDDN 640
               G++ DD+
Sbjct: 364 F-YNGQICDDD 373


>AE013599-3905|AAF47232.2|  583|Drosophila melanogaster CG3522-PA,
           isoform A protein.
          Length = 583

 Score = 97.5 bits (232), Expect = 1e-20
 Identities = 46/131 (35%), Positives = 75/131 (57%)
 Frame = +2

Query: 248 DEYKSQANESMANAWRIITLPNWTVEKRGSVRGDVVESRKVEGYGKVYRFTGVVNCPARF 427
           DEY     + +  A+ II   +W VEK    +GD + S + +  GK+Y+ T  +  PA+ 
Sbjct: 245 DEYTQMGLDCLRKAYEIIESSDWKVEKVNQ-KGDTIHSTQRDKIGKIYKLTARIKYPAKA 303

Query: 428 LYEEFKNNLTKLPEWNPTILKCEIIKEIGDGVDLSYQVTAGGGRGIITPRDFVILRRIAL 607
           L E+    +   P+WNP +L+ +I+++I    D++YQV+ GGG G++  RDFV LR   L
Sbjct: 304 LMEDLFYRIEDCPKWNPALLESKIVRKINSYTDITYQVSVGGGGGMVKSRDFVNLRSCRL 363

Query: 608 LSREGRVVDDN 640
               G++ DD+
Sbjct: 364 F-YNGQICDDD 373


>AF132170-1|AAD34758.1|  286|Drosophila melanogaster unknown
           protein.
          Length = 286

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +3

Query: 282 RTLGASSRCQTGRWRSEGPSGETSWSPG 365
           +  G SS   TG W S G +    WS G
Sbjct: 230 KNAGGSSAASTGGWSSGGGASSAGWSSG 257


>AE014297-418|AAF51903.2|  312|Drosophila melanogaster CG1151-PA
           protein.
          Length = 312

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +3

Query: 282 RTLGASSRCQTGRWRSEGPSGETSWSPG 365
           +  G SS   TG W S G +    WS G
Sbjct: 256 KNAGGSSAASTGGWSSGGGASSAGWSSG 283


>AE013599-2504|AAF57837.2| 2171|Drosophila melanogaster CG4903-PA
            protein.
          Length = 2171

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 570  VIMPRPPPAVTWYDRSTPSP 511
            +I P+PPP +TW     P+P
Sbjct: 1918 LIKPQPPPQLTWAKEDLPTP 1937


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,322,739
Number of Sequences: 53049
Number of extensions: 564244
Number of successful extensions: 2216
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2212
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)