Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt20d10
         (638 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB058728-1|BAB47454.1| 1203|Homo sapiens KIAA1825 protein protein.     82   1e-15
AF288687-1|AAG01173.1| 1086|Homo sapiens CGI-152 protein protein.      55   2e-07
AK000321-1|BAA91084.1|  309|Homo sapiens protein ( Homo sapiens ...    31   2.6  
AB028980-1|BAA83009.1|  977|Homo sapiens KIAA1057 protein protein.     31   2.6  
U81006-1|AAB38973.1|  663|Homo sapiens p76 protein.                    30   8.0  
BC130293-1|AAI30294.1|  663|Homo sapiens transmembrane 9 superfa...    30   8.0  
BC110656-1|AAI10657.1|  663|Homo sapiens transmembrane 9 superfa...    30   8.0  
BC029660-1|AAH29660.1|  309|Homo sapiens USP24 protein protein.        30   8.0  
AL139035-1|CAH71381.1|  663|Homo sapiens transmembrane 9 superfa...    30   8.0  

>AB058728-1|BAB47454.1| 1203|Homo sapiens KIAA1825 protein protein.
          Length = 1203

 Score = 82.2 bits (194), Expect = 1e-15
 Identities = 56/152 (36%), Positives = 81/152 (53%), Gaps = 7/152 (4%)
 Frame = +1

Query: 202 DDLVQYTQLFKPVPTVLQGTVLPFL-FIYPLVFYSWIV-VYGIEDNF----EAGFVTVAV 363
           D+LV     ++ +  + + TVLPF   +YP    +     +G   ++    EA  + +A 
Sbjct: 46  DELVAAVWPYRRLALLRRLTVLPFAGLLYPAWLGAAAAGCWGWGSSWVQIPEAALLVLAT 105

Query: 364 IATVQILICLCCYWSVHINCFLSCSAVKDPIQAEVVKVVPTSNNGSSELVRLHHTKSTKK 543
           I     L  L  +WSVH +C L+C+   DP +A  VKVVPT NNGS+ELV LH  +   +
Sbjct: 106 ICLAHALTVLSGHWSVHAHCALTCTPEYDPSKATFVKVVPTPNNGSTELVALHRNEG--E 163

Query: 544 DSIHPDVWFIFQKSKYVYD-WDKKNFHTIEFP 636
           D +   + F FQK KY YD  +KK F  + FP
Sbjct: 164 DGLEV-LSFEFQKIKYSYDALEKKQFLPVAFP 194


>AF288687-1|AAG01173.1| 1086|Homo sapiens CGI-152 protein protein.
          Length = 1086

 Score = 55.2 bits (127), Expect = 2e-07
 Identities = 32/64 (50%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
 Frame = +1

Query: 448 DPIQAEVVKVVPTSNNGSSELVRLHHTKSTKKDSIHPDVWFIFQKSKYVYD-WDKKNFHT 624
           DP +A  VKVVPT NNGS+ELV LH  +   +D +   + F FQK KY YD  +KK F  
Sbjct: 17  DPSKATFVKVVPTPNNGSTELVALHRNEG--EDGLEV-LSFEFQKIKYSYDALEKKQFLP 73

Query: 625 IEFP 636
           + FP
Sbjct: 74  VAFP 77


>AK000321-1|BAA91084.1|  309|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20314 fis, clone HEP07831. ).
          Length = 309

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = +1

Query: 442 VKDPIQAEVVKVVPTSNNGSSELVRLHHTKSTKKDSIHPDVWFIF---QKSKYVYDWDKK 612
           ++DPIQAE VK V  + NG   L  +HH+        +  V F+    QK     ++ K+
Sbjct: 151 IEDPIQAERVKFVFETENGL--LALMHHSNHVDSSRCYQCVKFLVTLAQKCPAAKEYFKE 208

Query: 613 NFH 621
           N H
Sbjct: 209 NSH 211


>AB028980-1|BAA83009.1|  977|Homo sapiens KIAA1057 protein protein.
          Length = 977

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = +1

Query: 442  VKDPIQAEVVKVVPTSNNGSSELVRLHHTKSTKKDSIHPDVWFIF---QKSKYVYDWDKK 612
            ++DPIQAE VK V  + NG   L  +HH+        +  V F+    QK     ++ K+
Sbjct: 819  IEDPIQAERVKFVFETENGL--LALMHHSNHVDSSRCYQCVKFLVTLAQKCPAAKEYFKE 876

Query: 613  NFH 621
            N H
Sbjct: 877  NSH 879


>U81006-1|AAB38973.1|  663|Homo sapiens p76 protein.
          Length = 663

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
 Frame = +1

Query: 232 KPVPTVLQGTVLPFLFIYPLVFYSWIVVYGIEDNFEAGF---VTVAVIATVQILICLCCY 402
           KP+P ++ G +LPF  I+  +F+    ++  +  +  GF   V + ++ T      L CY
Sbjct: 519 KPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCSEATILLCY 578

Query: 403 W 405
           +
Sbjct: 579 F 579


>BC130293-1|AAI30294.1|  663|Homo sapiens transmembrane 9
           superfamily member 2 protein.
          Length = 663

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
 Frame = +1

Query: 232 KPVPTVLQGTVLPFLFIYPLVFYSWIVVYGIEDNFEAGF---VTVAVIATVQILICLCCY 402
           KP+P ++ G +LPF  I+  +F+    ++  +  +  GF   V + ++ T      L CY
Sbjct: 519 KPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCSEATILLCY 578

Query: 403 W 405
           +
Sbjct: 579 F 579


>BC110656-1|AAI10657.1|  663|Homo sapiens transmembrane 9
           superfamily member 2 protein.
          Length = 663

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
 Frame = +1

Query: 232 KPVPTVLQGTVLPFLFIYPLVFYSWIVVYGIEDNFEAGF---VTVAVIATVQILICLCCY 402
           KP+P ++ G +LPF  I+  +F+    ++  +  +  GF   V + ++ T      L CY
Sbjct: 519 KPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCSEATILLCY 578

Query: 403 W 405
           +
Sbjct: 579 F 579


>BC029660-1|AAH29660.1|  309|Homo sapiens USP24 protein protein.
          Length = 309

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
 Frame = +1

Query: 442 VKDPIQAEVVKVVPTSNNGSSELVRLHHTKSTKKDSIHPDVWFIF---QKSKYVYDWDKK 612
           ++DPIQ E VK V  + NG   L  +HH+        +  V F+    QK     ++ K+
Sbjct: 151 IEDPIQVERVKFVFETENGL--LALMHHSNHVDSSRCYQCVKFLVTLAQKCPAAKEYFKE 208

Query: 613 NFH 621
           N H
Sbjct: 209 NSH 211


>AL139035-1|CAH71381.1|  663|Homo sapiens transmembrane 9
           superfamily member 2 protein.
          Length = 663

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
 Frame = +1

Query: 232 KPVPTVLQGTVLPFLFIYPLVFYSWIVVYGIEDNFEAGF---VTVAVIATVQILICLCCY 402
           KP+P ++ G +LPF  I+  +F+    ++  +  +  GF   V + ++ T      L CY
Sbjct: 519 KPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCSEATILLCY 578

Query: 403 W 405
           +
Sbjct: 579 F 579


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,469,136
Number of Sequences: 237096
Number of extensions: 1754449
Number of successful extensions: 2748
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2748
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)