Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt20d10
(638 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83217-4|CAB05683.2| 1178|Caenorhabditis elegans Hypothetical pr... 89 2e-18
AL021479-1|CAA16321.2| 346|Caenorhabditis elegans Hypothetical ... 35 0.043
Z82057-5|CAB04861.3| 325|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z82051-9|CAB04820.1| 350|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z82051-7|CAB04819.1| 364|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z81142-11|CAB03512.3| 325|Caenorhabditis elegans Hypothetical p... 31 0.70
U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein ... 31 0.92
U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein ... 31 0.92
Z75550-2|CAA99928.2| 421|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF040649-2|AAB95004.2| 324|Caenorhabditis elegans Serpentine re... 29 2.1
AF026213-6|AAB71307.1| 655|Caenorhabditis elegans Temporarily a... 29 2.1
AF024494-9|AAB70333.1| 336|Caenorhabditis elegans Serpentine re... 29 3.7
Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical p... 28 6.5
AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical ... 28 6.5
Z83116-6|CAB05565.2| 302|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z82084-4|CAB04980.1| 667|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z81132-11|CAB03426.2| 302|Caenorhabditis elegans Hypothetical p... 27 8.6
Z81118-3|CAB03325.1| 346|Caenorhabditis elegans Hypothetical pr... 27 8.6
>Z83217-4|CAB05683.2| 1178|Caenorhabditis elegans Hypothetical
protein C10C6.6 protein.
Length = 1178
Score = 89.4 bits (212), Expect = 2e-18
Identities = 44/121 (36%), Positives = 65/121 (53%)
Frame = +1
Query: 262 VLPFLFIYPLVFYSWIVVYGIEDNFEAGFVTVAVIATVQILICLCCYWSVHINCFLSCSA 441
V PF I + Y W+ ++G E+ +E G + A I + L+ L C+W + + CFL CS
Sbjct: 24 VPPFTIITAIWTYVWLNIFGYEEYYELGMLGYAAIFVILALVLLFCHWMMPVRCFLMCSK 83
Query: 442 VKDPIQAEVVKVVPTSNNGSSELVRLHHTKSTKKDSIHPDVWFIFQKSKYVYDWDKKNFH 621
+D A V V+PT NNG ELV+L T K+ + WF FQ+ Y +D + + F
Sbjct: 84 QEDVRIASHVCVIPTQNNGWPELVKLMRTTRDKQTKL----WFEFQRVHYTWDEESREFQ 139
Query: 622 T 624
T
Sbjct: 140 T 140
>AL021479-1|CAA16321.2| 346|Caenorhabditis elegans Hypothetical
protein Y22F5A.2 protein.
Length = 346
Score = 35.1 bits (77), Expect = 0.043
Identities = 24/98 (24%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Frame = +1
Query: 238 VPTVLQGTVLPFLFIYPLVFYSWIVVYGIEDNFEAGFVTVAVIA--TVQILICLCCYWSV 411
+ T++Q V F F++P++ S +++ G +D A V + VI+ + + +C ++
Sbjct: 246 ISTIMQNLVFAFFFLFPILILSVVILTG-KDASGACLVLIGVISFHSSANTLVMCLTFTS 304
Query: 412 HINCFLS--CSAVKDPIQAEVVKVVPTSNNGSSELVRL 519
LS C+ + Q+ + +VP NN S ++R+
Sbjct: 305 FRKAILSFFCNFCQQN-QSRTITIVPPVNNLSVTVIRV 341
>Z82057-5|CAB04861.3| 325|Caenorhabditis elegans Hypothetical
protein ZK1037.11 protein.
Length = 325
Score = 31.1 bits (67), Expect = 0.70
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +1
Query: 253 QGTVLPFLFIYPLVFYSWIVVYGIEDNFEAGFVTVAVIATVQILICL 393
+ TV + F++ L+F W+ + D+ G VT+ ++ V I+I +
Sbjct: 72 KATVKSYTFLFILIF--WLALATFSDSVNFGIVTIIILTVVVIIIAI 116
>Z82051-9|CAB04820.1| 350|Caenorhabditis elegans Hypothetical
protein T23D5.12 protein.
Length = 350
Score = 31.1 bits (67), Expect = 0.70
Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Frame = +1
Query: 28 KLARLRNQTIILN*NQ-SIEWSNAA**YHLVKIWQLR*NPYQLIEFFIATSMVKMQSSLD 204
KL+ + + T ++ + +I W N A + I L+ Y +I F V M+ +
Sbjct: 177 KLSAIPSFTFVIYTERGAIRWRNLACTIEMTMIIGLQ---YSIICFCGRKMSVGMKEKIS 233
Query: 205 DLVQ-----YTQLFKPVPTVLQGTVLPFLFIYPLVFYSWIVVYGIEDNFEAG--FVTVAV 363
L + +TQ FK + +LQ V L +P++ ++ V+ ++ +F G F A+
Sbjct: 234 MLSETSKRLHTQFFKAL--ILQIVVPTILLFFPMIIIIYLPVFNLKFSFPTGILFSAFAI 291
Query: 364 IATVQILICL 393
++ I I L
Sbjct: 292 YPSIDIAIIL 301
>Z82051-7|CAB04819.1| 364|Caenorhabditis elegans Hypothetical
protein T23D5.10 protein.
Length = 364
Score = 31.1 bits (67), Expect = 0.70
Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Frame = +1
Query: 28 KLARLRNQTIILN*NQ-SIEWSNAA**YHLVKIWQLR*NPYQLIEFFIATSMVKMQSSLD 204
KL+ + + T ++ + +I W N A + I L+ Y +I F V M+ +
Sbjct: 191 KLSAIPSFTFVIYTERGAIRWRNLACTIEMTMIIGLQ---YSIICFCGRKMSVGMKEKIS 247
Query: 205 DLVQ-----YTQLFKPVPTVLQGTVLPFLFIYPLVFYSWIVVYGIEDNFEAG--FVTVAV 363
L + +TQ FK + +LQ V L +P++ ++ V+ ++ +F G F A+
Sbjct: 248 MLSETSKRLHTQFFKAL--ILQIVVPTILLFFPMIIIIYLPVFNLKFSFPTGILFSAFAI 305
Query: 364 IATVQILICL 393
++ I I L
Sbjct: 306 YPSIDIAIIL 315
>Z81142-11|CAB03512.3| 325|Caenorhabditis elegans Hypothetical
protein ZK1037.11 protein.
Length = 325
Score = 31.1 bits (67), Expect = 0.70
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +1
Query: 253 QGTVLPFLFIYPLVFYSWIVVYGIEDNFEAGFVTVAVIATVQILICL 393
+ TV + F++ L+F W+ + D+ G VT+ ++ V I+I +
Sbjct: 72 KATVKSYTFLFILIF--WLALATFSDSVNFGIVTIIILTVVVIIIAI 116
>U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein 363,
isoform b protein.
Length = 2692
Score = 30.7 bits (66), Expect = 0.92
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 442 VKDPIQAEVVKVVPTSNNGSSELVRLHHTKS-TKKDSIHP 558
V++ I EV KV PT+ +SELV + TK KD++ P
Sbjct: 1291 VEEKISEEVPKVAPTTARPTSELVTVQITKQRLNKDALMP 1330
>U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein 363,
isoform a protein.
Length = 2695
Score = 30.7 bits (66), Expect = 0.92
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 442 VKDPIQAEVVKVVPTSNNGSSELVRLHHTKS-TKKDSIHP 558
V++ I EV KV PT+ +SELV + TK KD++ P
Sbjct: 1291 VEEKISEEVPKVAPTTARPTSELVTVQITKQRLNKDALMP 1330
>Z75550-2|CAA99928.2| 421|Caenorhabditis elegans Hypothetical
protein T22C1.3 protein.
Length = 421
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/54 (24%), Positives = 30/54 (55%)
Frame = +1
Query: 247 VLQGTVLPFLFIYPLVFYSWIVVYGIEDNFEAGFVTVAVIATVQILICLCCYWS 408
++ GT++ +F+ P++++ WIV NF G V +A + +++ + +S
Sbjct: 345 LIAGTIVSTVFLMPVMWHMWIVSSSGNANFFFGTTIVYNVALINLVMDMIFVYS 398
>AF040649-2|AAB95004.2| 324|Caenorhabditis elegans Serpentine
receptor, class i protein74 protein.
Length = 324
Score = 29.5 bits (63), Expect = 2.1
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Frame = +1
Query: 148 QLIEFFIATSMVKMQSSLDDLVQYTQLFKPVPTVLQGTVLPFL--FIYPLVFYSWIVVYG 321
QL +F + ++ L D + +T L +P+P + P IY +VF +W +G
Sbjct: 40 QLGKFKYYLLLFQLSCVLTD-IDFTILVQPIP------LFPLFAGHIYGVVF-TW---FG 88
Query: 322 IEDNFEAGFVTVAVIATVQILICLCCYWSVH 414
+ N G VT+A +A +QI L C+ H
Sbjct: 89 LPAN--TGAVTIAFVAAIQIESLLVCFMEKH 117
>AF026213-6|AAB71307.1| 655|Caenorhabditis elegans Temporarily
assigned gene nameprotein 123 protein.
Length = 655
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/69 (26%), Positives = 35/69 (50%)
Frame = +1
Query: 232 KPVPTVLQGTVLPFLFIYPLVFYSWIVVYGIEDNFEAGFVTVAVIATVQILICLCCYWSV 411
KP+P +L G +LPF I+ +F+ ++ + + GF+ + + ILI C ++
Sbjct: 511 KPLPGMLMGGILPFGCIFIQLFFILNSIWAHQTYYMFGFLFLVYL----ILIITCSEATI 566
Query: 412 HINCFLSCS 438
+ F C+
Sbjct: 567 LLAYFHLCA 575
>AF024494-9|AAB70333.1| 336|Caenorhabditis elegans Serpentine
receptor, class u protein27 protein.
Length = 336
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +1
Query: 208 LVQYTQLFKPVPTVLQGTVLPFLFIYPL--VFYSWIVV 315
L+ Y Q + + V+ + LPF+ IYP+ F+ W V
Sbjct: 140 LIAYPQRQEKINRVILKSALPFILIYPMFFTFFMWPAV 177
>Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 27.9 bits (59), Expect = 6.5
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 376 QILICLCCYWSVHINCFLSC 435
++ IC+CC WS +L C
Sbjct: 66 KLFICVCCNWSFGTEIYLKC 85
>AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 27.9 bits (59), Expect = 6.5
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 376 QILICLCCYWSVHINCFLSC 435
++ IC+CC WS +L C
Sbjct: 66 KLFICVCCNWSFGTEIYLKC 85
>Z83116-6|CAB05565.2| 302|Caenorhabditis elegans Hypothetical
protein M01B2.7 protein.
Length = 302
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +1
Query: 265 LPFLFIYPLVFYSWIVVYGIEDNFEAGFVTV---AVIATVQILICLCCY 402
+ L + L YS I + G N VT+ + + ILIC+CC+
Sbjct: 1 MELLLVILLFLYSTIFIVGFTGNLLMVLVTLHSNKLRSICNILICVCCF 49
>Z82084-4|CAB04980.1| 667|Caenorhabditis elegans Hypothetical
protein ZK1053.4 protein.
Length = 667
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +1
Query: 535 TKKDSIHPDVWFIFQKSKYVYDWDKKNFHTIEFP 636
T K IH F + Y YD +KK FH + P
Sbjct: 514 TCKYIIHVQNQFTEKMETYAYDCEKKRFHQVTCP 547
>Z81132-11|CAB03426.2| 302|Caenorhabditis elegans Hypothetical
protein T26E4.15 protein.
Length = 302
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +1
Query: 265 LPFLFIYPLVFYSWIVVYGIEDNFEAGFVTV---AVIATVQILICLCCY 402
+ L + L YS I + G N VT+ + + ILIC+CC+
Sbjct: 1 MELLLVILLFLYSTIFIVGFTGNLFMVLVTLHSNKLRSICNILICVCCF 49
>Z81118-3|CAB03325.1| 346|Caenorhabditis elegans Hypothetical
protein T10G3.2 protein.
Length = 346
Score = 27.5 bits (58), Expect = 8.6
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +1
Query: 283 YPLVFYSWIVVYGIEDNFEAGFVTVAVIAT--VQILICLCCYWSVHINCFLSCSAVK 447
Y LVF + I+VY IE F V +A I T +Q+L + C WS+ + F++ S K
Sbjct: 143 YALVF-ACILVY-IE--FANRHVMMATIPTRNIQVLFAIICSWSLILLLFINRSKSK 195
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,428,210
Number of Sequences: 27780
Number of extensions: 291983
Number of successful extensions: 861
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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