Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt20c16
(634 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026209-2|AAN84883.1| 863|Caenorhabditis elegans Gex interacti... 61 7e-10
AF026209-1|AAB71278.2| 968|Caenorhabditis elegans Gex interacti... 61 7e-10
U23159-1|AAA85857.1| 1005|Caenorhabditis elegans bifunctional gl... 60 1e-09
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr... 35 0.042
U97007-7|AAB52292.1| 441|Caenorhabditis elegans Hypothetical pr... 30 1.2
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 30 1.6
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 30 1.6
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 30 1.6
Z81062-14|CAB02947.2| 362|Caenorhabditis elegans Hypothetical p... 29 3.7
AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin recep... 29 3.7
AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal daue... 29 3.7
Z75954-4|CAB00109.1| 273|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical pr... 28 6.4
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 28 6.4
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 28 6.4
AF099915-1|AAC68771.1| 460|Caenorhabditis elegans Hypothetical ... 27 8.4
>AF026209-2|AAN84883.1| 863|Caenorhabditis elegans Gex interacting
protein protein7, isoform b protein.
Length = 863
Score = 60.9 bits (141), Expect = 7e-10
Identities = 46/156 (29%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Frame = +1
Query: 196 IFSSEVLEFIAALHRNFDKKIELLYENRKRRAVEIKNDP-FIDFKNSPE--RRDKSWKIA 366
I + + L F+ L+ F+ + L R + +I N F DF E R D+ WK A
Sbjct: 456 ILTPDALRFLHDLNTEFNPRRLRLLSKRNQVQADINNSLWFPDFNKETEVLRSDQGWKGA 515
Query: 367 PLPIRLQNRHLDLGDVSASNTAHFVVALNEDVQGIQVDFDDGHCPTWRNQLLAFNNINLA 546
+P LQ+R +++ ++ + A+N DF+D + PTWRNQL N+ A
Sbjct: 516 EIPRDLQDRRVEI--TGPTDRKMVINAMNSGANVFMADFEDSNSPTWRNQLEGQINLYDA 573
Query: 547 VNGKLQGA-PLTITTC------PVLMFRPRAWNMIE 633
V + P T VL RPR W++ E
Sbjct: 574 VRNNISYTHPTTKKEYTLNEKHAVLKVRPRGWHLPE 609
>AF026209-1|AAB71278.2| 968|Caenorhabditis elegans Gex interacting
protein protein7, isoform a protein.
Length = 968
Score = 60.9 bits (141), Expect = 7e-10
Identities = 46/156 (29%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Frame = +1
Query: 196 IFSSEVLEFIAALHRNFDKKIELLYENRKRRAVEIKNDP-FIDFKNSPE--RRDKSWKIA 366
I + + L F+ L+ F+ + L R + +I N F DF E R D+ WK A
Sbjct: 456 ILTPDALRFLHDLNTEFNPRRLRLLSKRNQVQADINNSLWFPDFNKETEVLRSDQGWKGA 515
Query: 367 PLPIRLQNRHLDLGDVSASNTAHFVVALNEDVQGIQVDFDDGHCPTWRNQLLAFNNINLA 546
+P LQ+R +++ ++ + A+N DF+D + PTWRNQL N+ A
Sbjct: 516 EIPRDLQDRRVEI--TGPTDRKMVINAMNSGANVFMADFEDSNSPTWRNQLEGQINLYDA 573
Query: 547 VNGKLQGA-PLTITTC------PVLMFRPRAWNMIE 633
V + P T VL RPR W++ E
Sbjct: 574 VRNNISYTHPTTKKEYTLNEKHAVLKVRPRGWHLPE 609
>U23159-1|AAA85857.1| 1005|Caenorhabditis elegans bifunctional
glyoxylate cycle proteinprotein.
Length = 1005
Score = 60.5 bits (140), Expect = 1e-09
Identities = 46/156 (29%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Frame = +1
Query: 196 IFSSEVLEFIAALHRNFDKKIELLYENRKRRAVEIKNDP-FIDFKNSPE--RRDKSWKIA 366
I + + L F+ L+ F+ + L R + +I N F DF E R D+ WK A
Sbjct: 496 ILTPDALAFLHDLNTEFNPRRLRLLSKRNQVQADINNSLWFPDFNKETEVLRSDQGWKGA 555
Query: 367 PLPIRLQNRHLDLGDVSASNTAHFVVALNEDVQGIQVDFDDGHCPTWRNQLLAFNNINLA 546
+P LQ+R +++ ++ + A+N DF+D + PTWRNQL N+ A
Sbjct: 556 EIPRDLQDRRVEI--TGPTDRKMVINAMNSGANVFMADFEDSNSPTWRNQLEGQINLYDA 613
Query: 547 VNGKLQGA-PLTITTC------PVLMFRPRAWNMIE 633
V + P T VL RPR W++ E
Sbjct: 614 VRNNISYTHPTTKKEYTLNEKHAVLKVRPRGWHLPE 649
>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical protein
K10G4.5 protein.
Length = 1251
Score = 35.1 bits (77), Expect = 0.042
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = +1
Query: 373 PIRLQNRHLDLGDVSASNTAHFVVALNEDVQGI---QVDFDDGHCPTWRNQLLAFNNINL 543
PIR++NR D DV H + E + Q+ FDD H +QL++ + +NL
Sbjct: 841 PIRIKNR--DCMDVLCDEMKHILEKNPEKLNEFIVEQMGFDDEHLMRLHDQLVSISKVNL 898
Query: 544 AVNGKLQ 564
GK+Q
Sbjct: 899 ITAGKVQ 905
>U97007-7|AAB52292.1| 441|Caenorhabditis elegans Hypothetical
protein ZC196.3 protein.
Length = 441
Score = 30.3 bits (65), Expect = 1.2
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Frame = +1
Query: 115 EKNNYIMVHDVILLQVPLPK-LEELQKTIFSSEVLEFIAALHRNFDKKIELLYENRKRRA 291
E + + M+ D L+ +P+ LE+L+ IFSS +F D IEL +RK+
Sbjct: 83 ESSEFEMI-DTSSLEKYVPEVLEDLKYAIFSSNWTDFYFKYRSAVDTIIEL---SRKQGT 138
Query: 292 VEIK----NDPFIDFKNSPERRDKSWKIAPLPIRLQNRHLD 402
V+I N+ FK+ RR +K+ + + +NR +
Sbjct: 139 VDISIQIGNNSCESFKDRDFRRYTYYKLGNISEKPENREFE 179
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 29.9 bits (64), Expect = 1.6
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +1
Query: 172 KLEELQKTIFSSEVLEF-IAALHRNFDKKIELLYENRKRRAVEIKNDPFIDFKNSPERRD 348
KL L+K + S E + R++D+KI LY ++ IK D + DF+N ++
Sbjct: 1178 KLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQK----IK-DEWDDFRNDADKEI 1232
Query: 349 KSWKIAPLPIRLQNRHLD 402
+ WK +R + + L+
Sbjct: 1233 QKWKTDAYTVRSEAKALE 1250
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 29.9 bits (64), Expect = 1.6
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +1
Query: 172 KLEELQKTIFSSEVLEF-IAALHRNFDKKIELLYENRKRRAVEIKNDPFIDFKNSPERRD 348
KL L+K + S E + R++D+KI LY ++ IK D + DF+N ++
Sbjct: 1251 KLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQK----IK-DEWDDFRNDADKEI 1305
Query: 349 KSWKIAPLPIRLQNRHLD 402
+ WK +R + + L+
Sbjct: 1306 QKWKTDAYTVRSEAKALE 1323
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 29.9 bits (64), Expect = 1.6
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +1
Query: 172 KLEELQKTIFSSEVLEF-IAALHRNFDKKIELLYENRKRRAVEIKNDPFIDFKNSPERRD 348
KL L+K + S E + R++D+KI LY ++ IK D + DF+N ++
Sbjct: 1251 KLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQK----IK-DEWDDFRNDADKEI 1305
Query: 349 KSWKIAPLPIRLQNRHLD 402
+ WK +R + + L+
Sbjct: 1306 QKWKTDAYTVRSEAKALE 1323
>Z81062-14|CAB02947.2| 362|Caenorhabditis elegans Hypothetical
protein F15A4.3 protein.
Length = 362
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2
Query: 546 SQIYVVESEKLVPPCWTVTVIKIYLDPLNILI 451
+ IY++ LV CW IK++ D +NI++
Sbjct: 38 TSIYILTGYILVRICWIFLTIKVFHDNMNIMM 69
>AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin receptor
homolog protein.
Length = 1846
Score = 28.7 bits (61), Expect = 3.7
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = +1
Query: 331 SPERRDKSWKIAPLPIRLQNRH-LDLGDVSASNTAHFVVALNEDVQGIQVDFDDGHCPTW 507
SPE RD S+ + + L + LDL D+ ++ VV + DV+ ++V D T
Sbjct: 1525 SPEFRDLSFVLTDNQMILDDSEALDLDDIDDTDMNDQVVEVAPDVENVEVQSDSERRNTD 1584
Query: 508 RNQLLAFNNINLAVNGKLQGAPLTITTCPV 597
L F I +N + ++I P+
Sbjct: 1585 SIPLKQFKTIP-PINATTSHSTISIDETPM 1613
>AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal dauer
formation protein 2 protein.
Length = 1843
Score = 28.7 bits (61), Expect = 3.7
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = +1
Query: 331 SPERRDKSWKIAPLPIRLQNRH-LDLGDVSASNTAHFVVALNEDVQGIQVDFDDGHCPTW 507
SPE RD S+ + + L + LDL D+ ++ VV + DV+ ++V D T
Sbjct: 1522 SPEFRDLSFVLTDNQMILDDSEALDLDDIDDTDMNDQVVEVAPDVENVEVQSDSERRNTD 1581
Query: 508 RNQLLAFNNINLAVNGKLQGAPLTITTCPV 597
L F I +N + ++I P+
Sbjct: 1582 SIPLKQFKTIP-PINATTSHSTISIDETPM 1610
>Z75954-4|CAB00109.1| 273|Caenorhabditis elegans Hypothetical
protein F58H1.6 protein.
Length = 273
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 160 VPLPKLEELQKTIFSSEVLEFIAALHRNFDKKIELLYENRKRRAVE 297
VPLP + T+F+ +L F R F+KK ++ + +R+RR V+
Sbjct: 58 VPLPIAITITTTLFTWLILFFFWYSSRRFEKK-KIHFPSRRRRFVD 102
>Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical protein
F22E10.2 protein.
Length = 1324
Score = 27.9 bits (59), Expect = 6.4
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = -3
Query: 332 EFLKSIKGSFFISTARRFLFSYNNSIFLSKLRCRAAINSRTSLEKIVFCNSSSF 171
E ++++K ++ RRFL SY N SK R R + ++ E + +C S +F
Sbjct: 949 EIIENVKTIQLLTRTRRFLNSYENE---SKKRKRTELR-KSVYEAVNYCISQNF 998
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 235 HRNFDKKIELLYENRKRRAVEIKNDPFIDFKNSPERRDK 351
+R ++K L E R RR E +ID + SPER+ K
Sbjct: 415 NREMERKSRLDTERRSRRQSEGSRQIYIDRQISPERQRK 453
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 235 HRNFDKKIELLYENRKRRAVEIKNDPFIDFKNSPERRDK 351
+R ++K L E R RR E +ID + SPER+ K
Sbjct: 637 NREMERKSRLDTERRSRRQSEGSRQIYIDRQISPERQRK 675
>AF099915-1|AAC68771.1| 460|Caenorhabditis elegans Hypothetical
protein E02H9.6 protein.
Length = 460
Score = 27.5 bits (58), Expect = 8.4
Identities = 17/74 (22%), Positives = 39/74 (52%)
Frame = +1
Query: 127 YIMVHDVILLQVPLPKLEELQKTIFSSEVLEFIAALHRNFDKKIELLYENRKRRAVEIKN 306
YI + +L +PL LQ+T++S + + +++ DK + ++ + +E+KN
Sbjct: 349 YIQI-PTLLCAIPLINGINLQRTVYSKIIYNLLCSIYHKKDKYL------KETKNLELKN 401
Query: 307 DPFIDFKNSPERRD 348
+F+NS +++
Sbjct: 402 LNSKNFENSKIKKN 415
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,671,164
Number of Sequences: 27780
Number of extensions: 309542
Number of successful extensions: 783
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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