Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt20c10
(673 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr 1|||M... 105 6e-24
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 75 7e-15
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 54 1e-08
SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase |S... 54 2e-08
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 52 1e-07
SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual 42 8e-05
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 42 1e-04
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 40 2e-04
SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces po... 40 4e-04
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 36 0.004
SPBC29A3.17 |gef3||RhoGEF Gef3|Schizosaccharomyces pombe|chr 2||... 33 0.037
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 31 0.20
SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces pom... 30 0.35
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 29 0.61
SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces ... 28 1.1
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 28 1.1
SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces po... 28 1.1
SPCC13B11.01 |adh1|adh|alcohol dehydrogenase Adh1|Schizosaccharo... 27 1.9
SPBC646.05c |erg9||squalene synthase Erg9|Schizosaccharomyces po... 27 3.3
SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces po... 27 3.3
SPAC22F8.07c |rtf1||replication termination factor Rtf1|Schizosa... 27 3.3
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 27 3.3
SPAC821.04c |cid13||poly|Schizosaccharomyces pombe|chr 1|||Manual 27 3.3
SPCC4G3.02 |aph1||bis|Schizosaccharomyces pombe|chr 3|||Manual 26 4.3
SPBC336.01 |fbh1|fdh1, fdh|DNA helicase I|Schizosaccharomyces po... 26 4.3
SPBC409.11 |meu18||sequence orphan|Schizosaccharomyces pombe|chr... 26 5.7
SPBC365.14c |||UDP-glucose 4-epimerase |Schizosaccharomyces pomb... 26 5.7
SPCC4G3.19 |alp16||gamma tubulin complex subunit Alp16 |Schizosa... 25 7.5
SPBC1773.17c ||SPBP26C9.01c|hydroxyacid dehydrogenase |Schizosac... 25 9.9
>SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 105 bits (252), Expect = 6e-24
Identities = 69/204 (33%), Positives = 110/204 (53%), Gaps = 13/204 (6%)
Frame = +2
Query: 101 LSNLEKLGILFVAF----FIFYCLKF--LWHFLYTYAIGPAVHCVDFKSK-GKWALVTGC 259
L+N G + AF +F LKF F+Y V + +K G WA+VTG
Sbjct: 6 LANKSCCGAVVTAFSVIGIVFTILKFTSFASFVYKTFFAKGVKLSVYGAKKGYWAVVTGA 65
Query: 260 TDGIGKEYAKELAARGCDIVLVSRSLDKLKATAEEIEKEYKVATKIIQADFSEDD-KIYE 436
TDGIGKEYA +LA G ++VL+SR+ +KL A A+E+E KV T+ I D+++ + +E
Sbjct: 66 TDGIGKEYATQLAMSGFNVVLISRTQEKLDALAKELETVAKVKTRTIAIDYTKTTAETFE 125
Query: 437 NIEKEIAGLEIGTLVNNVGVSYTYPEYFLD--LPEWDKLIPTLIKANVVAVTKMTRIVLP 610
+ +++ G I L+NNVG S+ P F + + E D ++ + + I+L
Sbjct: 126 KLHQDLVGTPITVLINNVGQSHYMPTSFAETTVKEMDDIMHINCFGTLHTTKAVLSIMLR 185
Query: 611 EMVKREKG---VVINIGSASSIIP 673
E K EKG +++ +GS + ++P
Sbjct: 186 ERQKNEKGPRCLILTMGSFAGLLP 209
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 75.4 bits (177), Expect = 7e-15
Identities = 48/145 (33%), Positives = 82/145 (56%), Gaps = 4/145 (2%)
Frame = +2
Query: 233 GKWALVTGCTDGIGKEYAKELA-ARGCDIVLVSRSLDKLKATAEEIEKEYKVATKIIQAD 409
GK L+TG + GIGK A E+A ++L +R ++ A+E+E +Y+V+ ++ D
Sbjct: 6 GKTILITGASSGIGKSTAFEIAKVAKVKLILAARRFSTVEEIAKELESKYEVSVLPLKLD 65
Query: 410 FSEDDKI---YENIEKEIAGLEIGTLVNNVGVSYTYPEYFLDLPEWDKLIPTLIKANVVA 580
S+ I E++ KE A +++ L+NN G++ + +DL D + T+I NV+
Sbjct: 66 VSDLKSIPGVIESLPKEFADIDV--LINNAGLALG-TDKVIDLNIDDAV--TMITTNVLG 120
Query: 581 VTKMTRIVLPEMVKREKGVVINIGS 655
+ MTR VLP + KG ++N+GS
Sbjct: 121 MMAMTRAVLPIFYSKNKGDILNVGS 145
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 54.4 bits (125), Expect = 1e-08
Identities = 48/149 (32%), Positives = 69/149 (46%), Gaps = 2/149 (1%)
Frame = +2
Query: 230 KGKWALVTGCTDGIGKEYAKELAARGCDIVLVSRSLDKLKATAEEIEKEYKVATKIIQAD 409
+G+ L+TG GIGK K G D V +D K + A +QAD
Sbjct: 4 EGRVVLITGAAGGIGKVLCKMFTELG-DRVAGIDIVDPSKV---------QDAALALQAD 53
Query: 410 FSEDDKIYENIEKEIAGL-EIGTLVNNVGVSYTYPEYFLDLPEWDKLIPTLIKANVVAVT 586
S+ D+I IEK I L I L+NN G++ P L WD + +++ N +
Sbjct: 54 VSKADQIETAIEKVIQTLGPIDVLINNAGLADDTPFEQLSHESWDHDVSLVLRGNYLT-- 111
Query: 587 KMTRIVLPEMVKREK-GVVINIGSASSII 670
R V+P M K+ K G ++NIGS + I
Sbjct: 112 --QRYVIPHMAKQGKGGSIVNIGSVNGHI 138
>SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 54.0 bits (124), Expect = 2e-08
Identities = 37/150 (24%), Positives = 74/150 (49%), Gaps = 4/150 (2%)
Frame = +2
Query: 236 KWALVTGCTD-GIGKEYAKELAARGCDIVLVSRSLDKLKATAEEIEKEYKVATKIIQADF 412
K+ L+TGC++ GIG A + G ++ +R + E ++ K + ++ D
Sbjct: 5 KFVLITGCSEGGIGNALALKFHQEGFQVLATARQV-------ERMDNLTKAGLQTLKLDV 57
Query: 413 SEDDKIYENIEKEIAGLEIGT---LVNNVGVSYTYPEYFLDLPEWDKLIPTLIKANVVAV 583
+++D + E +E+E+ G+ L+NN G + P LD+ + K ++ N V
Sbjct: 58 TDEDSVRE-VEQEVRKFTNGSLHYLINNAGAPCSAPAIDLDIEDVSK----VMDVNFYGV 112
Query: 584 TKMTRIVLPEMVKREKGVVINIGSASSIIP 673
+M + +++ R KG ++N+ S S +P
Sbjct: 113 IRMNKAFQHQLI-RAKGTIVNVNSLVSYVP 141
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 51.6 bits (118), Expect = 1e-07
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Frame = +2
Query: 233 GKWALVTGCTDGIGKEYAKELAARGCDIVLVSRSLDKLKATAEEIEKEYKVA-TKIIQAD 409
GK ALVTG + GIG A ELA +G + L R+ +K + ++I E + + + ++ D
Sbjct: 42 GKVALVTGSSGGIGYVTALELARKGAKVYLAGRNEEKYQKVMKQIHDEVRHSKIRFLRLD 101
Query: 410 FSEDDKIYENIEKEIAGLE-IGTLVNNVGV 496
+ + +Y+ E IA E + LVNN G+
Sbjct: 102 LLDFESVYQAAESFIAKEEKLHILVNNAGI 131
>SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual
Length = 503
Score = 41.9 bits (94), Expect = 8e-05
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = +2
Query: 245 LVTGCTDGIGKEYAKELAARGCDIVLVSRSLDKLKATAEEI 367
LVTG + G+GK AKEL RG ++ +V+R++ KL+ E+
Sbjct: 26 LVTGGSQGLGKAIAKELVLRGANVTIVARTVTKLQEAVAEL 66
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 41.5 bits (93), Expect = 1e-04
Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 4/144 (2%)
Frame = +2
Query: 245 LVTGCTDGIGKEYAKELAARGCDIVLVSRSLDKLKATAEEIEKEYKVATKIIQADFSEDD 424
L+TG + G+GK A+ + +G +V R+ LK T + + + AD D
Sbjct: 5 LITGGSSGLGKRIAQIWSQKGHQCHIVGRNEFHLKETLQSLSVAKGQQHTLTIADVQSDM 64
Query: 425 KIYENIEKEIAGLEIGTLVNNVGVSYTYPEYFLDLPEWDKLIPTLIKANVVAVTKMTRIV 604
K N++ +EI T+V+ GV + L + +K I ++I N+V+ K++++
Sbjct: 65 K---NLKSIFESVEIDTVVHAAGVL----QSSLCVRTSEKEIDSIICTNLVSAIKLSKMA 117
Query: 605 LPEMVKREKG----VVINIGSASS 664
+ E + + +++NI S S
Sbjct: 118 ILEWFRNKNSERDRLILNISSRLS 141
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 40.3 bits (90), Expect = 2e-04
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Frame = +2
Query: 221 FKSKGKWALVTGCTDGIGKEYAKELAARGCDIVLVSRSLDKLKATAEEIEKEYKVATKII 400
F KGK L+TG + GIG AK AA G ++ L+ K A E+ ++ V K
Sbjct: 5 FSLKGKTTLITGGSGGIGFSIAKAFAAAGSNVGLLYGRNKKALEYAAELRDKHGVQAKAY 64
Query: 401 QADFSEDDKIYE--NIEKEIAGLEIGTLVNNVGVS 499
+ E N E G + ++ N G++
Sbjct: 65 SCPIENRSAVIETTNQAVEELGGRLDVMIANAGIA 99
>SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 261
Score = 39.5 bits (88), Expect = 4e-04
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Frame = +2
Query: 209 HCVD-FKSKGKWALVTGCTDGIGKEYAKELAARGCDIVLVSRSLDKLKATAEEIEKEYKV 385
H +D F KGK +V G GIG A A G ++++ + D + A+++ +E V
Sbjct: 12 HVLDLFSLKGKNCVVFGAAKGIGFSIATAFAQAGGNVIITYLTTDPTE-KAKKLAEETGV 70
Query: 386 ATKIIQADFSEDDKIYENIEKEIAGL--EIGTLVNNVGVSY 502
++ D S D + +E EI + EI +V N G+ +
Sbjct: 71 QVHTLKIDISRSDTVEAGVE-EIQKIFKEIHVVVANAGMPF 110
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 36.3 bits (80), Expect = 0.004
Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 4/159 (2%)
Frame = +2
Query: 206 VHCVDFKSKGKWALVTGCTDGIGKEYAKELAARGCDIVL--VSRSLDKLKATAEEIEKEY 379
VH K K L+TG GIGK A A G D+V+ + D + T + IE+E
Sbjct: 33 VHVGSGKLAEKKTLLTGGDSGIGKAAAVMFAREGSDLVISCLPEERDDAEVTRDLIEREG 92
Query: 380 KVATKIIQADFSEDDKIYENIEKEIAGLE-IGTLVNNVGVSYTYPEY-FLDLPEWDKLIP 553
+ I + + D + ++ + L I LVNN+ +D +WD
Sbjct: 93 RNCW-IWEGKLDKSDNCRDLVDFALKKLGWIDVLVNNIAYQQVAQSIEDIDDEQWD---- 147
Query: 554 TLIKANVVAVTKMTRIVLPEMVKREKGVVINIGSASSII 670
K N+ + +T+ + M + ++N S ++ +
Sbjct: 148 LTFKTNIFSFFWVTKAAISHM--KSGSSIVNCSSINAYV 184
>SPBC29A3.17 |gef3||RhoGEF Gef3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 525
Score = 33.1 bits (72), Expect = 0.037
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +2
Query: 158 LKFL-WHFL--YTYAIGPAVHCVDFKSKGKWALVTGCTDGIGK 277
LKF +H+L +T+ +V C D KS KWAL++ D I K
Sbjct: 343 LKFSRYHYLKFFTFVEAYSVFCKDTKSADKWALISVALDNIAK 385
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 30.7 bits (66), Expect = 0.20
Identities = 21/90 (23%), Positives = 42/90 (46%)
Frame = +2
Query: 224 KSKGKWALVTGCTDGIGKEYAKELAARGCDIVLVSRSLDKLKATAEEIEKEYKVATKIIQ 403
KS L+TG + G+G K A+G +++ SR+ D + IE + K+
Sbjct: 2 KSTFSTVLITGSSKGLGYALVKVGLAQGYNVIACSRAPDTI-----TIEHSKLLKLKLDV 56
Query: 404 ADFSEDDKIYENIEKEIAGLEIGTLVNNVG 493
D + +++ ++ ++I ++NN G
Sbjct: 57 TDVKSVETAFKDAKRRFGNVDI--VINNAG 84
>SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 397
Score = 29.9 bits (64), Expect = 0.35
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 224 KSKGKWALVTGCTDGIGKEYAKELAARGCDIVLVSRS 334
K G +VTG + GIG+ ++LA+ G +V++ R+
Sbjct: 72 KMNGMVVMVTGGSSGIGQVVVEKLASLGAQVVILLRT 108
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 29.1 bits (62), Expect = 0.61
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -1
Query: 595 CHLCYSDHISFDQSWDELIPLWQVQE 518
C L + H + SWD+ I LW +++
Sbjct: 69 CALSFDSHYALSASWDKTIRLWDLEK 94
>SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 261
Score = 28.3 bits (60), Expect = 1.1
Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 8/104 (7%)
Frame = +2
Query: 230 KGKWALVTGCTDGIGKEYAKELAARGCDIVLVSRSLDKLKATAEEIEKEYKVATKIIQAD 409
KGK A+V G GIG A G + +V + KA A+EI + V T + D
Sbjct: 20 KGKNAVVFGGARGIGHAICSVFAEAGANAFIVYNTTPGEKA-AKEIAQANGVKTYTCKCD 78
Query: 410 FS---EDDKIYENIEKEIAGLEI-----GTLVNNVGVSYTYPEY 517
+ E + + I+K ++I G + TY E+
Sbjct: 79 VTIPKEVEHAFAEIQKVFDTIDIVVPNNGICTGKSAIDMTYEEF 122
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 28.3 bits (60), Expect = 1.1
Identities = 13/59 (22%), Positives = 30/59 (50%)
Frame = +2
Query: 293 LAARGCDIVLVSRSLDKLKATAEEIEKEYKVATKIIQADFSEDDKIYENIEKEIAGLEI 469
L+ + DI++ + ++ LK + KE++ + E + +N+ KE+ GL++
Sbjct: 212 LSKKISDILIPASAMKDLKDRKNALAKEFEESQPGSSLTLKEQANVIDNLRKEVFGLKL 270
>SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 28.3 bits (60), Expect = 1.1
Identities = 29/133 (21%), Positives = 56/133 (42%), Gaps = 1/133 (0%)
Frame = +2
Query: 248 VTGCTDGIGKEYAKELAARGCDIVLVSRSLDKLKATAEEIEKEYKVATKIIQADFSEDDK 427
+ G GIG KEL+ R +V S + +E K + II+ D S +
Sbjct: 10 IAGGNRGIGLSLVKELSNREGTVVFASARKPEAATELQEWSKSHS-NVHIIKLDISSLES 68
Query: 428 IYENIEKEIAGL-EIGTLVNNVGVSYTYPEYFLDLPEWDKLIPTLIKANVVAVTKMTRIV 604
E ++ + ++ L N G+ +++ L+ P D + + K NV+ + +
Sbjct: 69 ANEAAQEVAKAVGKVDVLWVNSGIFHSF-NTVLNTP--DDVWNSHYKTNVLGPIHVYQAF 125
Query: 605 LPEMVKREKGVVI 643
P + K E +++
Sbjct: 126 YPLVKKGESKIIV 138
>SPCC13B11.01 |adh1|adh|alcohol dehydrogenase
Adh1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 350
Score = 27.5 bits (58), Expect = 1.9
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +2
Query: 233 GKWALVTGCTDGIGK---EYAKELAARGCDIVLVSRSLDKLKATAEEIEKEYKVATKIIQ 403
G+W + G G+G +YAK +A R I + +K+ E+ ++K +I+
Sbjct: 173 GEWICIPGAGGGLGHLAVQYAKAMAMRVVAIDTGDDKAELVKSFGAEVFLDFKKEADMIE 232
Query: 404 A 406
A
Sbjct: 233 A 233
>SPBC646.05c |erg9||squalene synthase Erg9|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 460
Score = 26.6 bits (56), Expect = 3.3
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 107 NLEKLGI--LFVAFFIFYCLKFLWHFLYTYAIGPAVHCVDFK 226
+L+KLGI LFV F I CL ++ Y +H DFK
Sbjct: 419 DLQKLGISILFVFFIILVCLAVIF-----YVFNIRIHWSDFK 455
>SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 26.6 bits (56), Expect = 3.3
Identities = 29/135 (21%), Positives = 57/135 (42%), Gaps = 3/135 (2%)
Frame = +2
Query: 248 VTGCTDGIGKEYAKELAARGCDIVLVSRSLDKLKATAEEIEKEYKVATKIIQADFSEDDK 427
+ G GIG KEL++R V S + +E K + K ++ D +
Sbjct: 10 IAGGNRGIGLSLVKELSSREGTTVFASARKPEAATELQEWSKSHP-NVKTVELDVTSQQS 68
Query: 428 IYE---NIEKEIAGLEIGTLVNNVGVSYTYPEYFLDLPEWDKLIPTLIKANVVAVTKMTR 598
E ++ K + G+++ L N G+ +Y ++ PE ++ + NV+ + +
Sbjct: 69 ANEAAQSVAKAVDGIDV--LWLNSGICQSY-YTVMEAPE--EVWNAHYQTNVLGPIHVFK 123
Query: 599 IVLPEMVKREKGVVI 643
P + K++ VI
Sbjct: 124 AFYPLLTKKKTRQVI 138
>SPAC22F8.07c |rtf1||replication termination factor
Rtf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 466
Score = 26.6 bits (56), Expect = 3.3
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -2
Query: 402 WIIFVATLYSFSISSAVAFSLSRDRLTRTMSHPRAANSLAYSFPI 268
W++ + F S + F +RD L +T P+ N+L F I
Sbjct: 104 WVLLSQLIDEFLKESELNFVAARDLLIKTKRLPKPFNNLLIQFQI 148
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 26.6 bits (56), Expect = 3.3
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +2
Query: 260 TDGIGKEYAKELAARGCDIVLVSRSLDKLKATAEEIEK--EYKVATKIIQADFSEDDKIY 433
T I ++Y E +RG ++ R LD+LKA AE+ E+ ++ +A + + K
Sbjct: 459 TRPIREKYELE-KSRGSELQDAKRRLDELKAKAEDAERRNDFTLAADLKYYGIPDLQKRI 517
Query: 434 ENIEKE 451
E +E++
Sbjct: 518 EYLEQQ 523
>SPAC821.04c |cid13||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 578
Score = 26.6 bits (56), Expect = 3.3
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 107 NLEKLGILFVAFFIFYCLKFLW-HFLYTYAIG 199
N E LGILFV FF F+ F + HF+ + G
Sbjct: 272 NEESLGILFVEFFRFFGYLFDYEHFVLSIRHG 303
>SPCC4G3.02 |aph1||bis|Schizosaccharomyces pombe|chr 3|||Manual
Length = 182
Score = 26.2 bits (55), Expect = 4.3
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 401 QADFSEDDKIYENIEKEIAGLEIGTLVNN 487
+ADFSE+D +Y +EK L L N
Sbjct: 105 KADFSENDLVYSELEKNEGNLASLYLTGN 133
>SPBC336.01 |fbh1|fdh1, fdh|DNA helicase I|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 878
Score = 26.2 bits (55), Expect = 4.3
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 417 RTIRFTRTLRRKLLAWKSVLWSIMSEF 497
R++ T+ + KLLA+ LWS++ F
Sbjct: 425 RSLEVTKLSKEKLLAYTKKLWSLIVNF 451
>SPBC409.11 |meu18||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 553
Score = 25.8 bits (54), Expect = 5.7
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2
Query: 165 NLRQ*KIKNATNNIPSFS 112
N R +IKNA N+PSFS
Sbjct: 127 NSRHFEIKNAVENLPSFS 144
>SPBC365.14c |||UDP-glucose 4-epimerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 25.8 bits (54), Expect = 5.7
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
Frame = +2
Query: 245 LVTGCTDGIGKEYAKELAARGCDIVLVSRSLDKLKATAEEIEKEYKVATKIIQADFSED- 421
LVTG IG L +G D+V+V + IEK Q D ++
Sbjct: 10 LVTGGAGYIGSHTCVVLLEKGYDVVIVDNLCNSRVEAVHRIEKLTGKKVIFHQVDLLDEP 69
Query: 422 --DKIYEN 439
DK++ N
Sbjct: 70 ALDKVFAN 77
>SPCC4G3.19 |alp16||gamma tubulin complex subunit Alp16
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 759
Score = 25.4 bits (53), Expect = 7.5
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 132 LLHFLFFIALNSCGISCIRTPLDLQCIVLISSP 230
LL FLF A SC + I P+ LQC++ S+P
Sbjct: 320 LLDFLFDYA-RSCQ-NTISYPIALQCLIYCSNP 350
>SPBC1773.17c ||SPBP26C9.01c|hydroxyacid dehydrogenase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 340
Score = 25.0 bits (52), Expect = 9.9
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +2
Query: 269 IGKEYAKELAARGCDIVLVSRSLDKLKATAEE 364
IGK +A+++ GC+IV +R ++L+A E+
Sbjct: 170 IGKSFAQKILPLGCEIVYHNR--NRLEAEEEK 199
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,638,024
Number of Sequences: 5004
Number of extensions: 53474
Number of successful extensions: 210
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 205
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 307866294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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