Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt20c05
(717 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical ... 36 0.029
AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein. 36 0.038
AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein. 36 0.038
AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cel... 36 0.038
AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cel... 36 0.038
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 34 0.088
Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical pr... 34 0.12
U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical pr... 33 0.15
U80442-4|AAB37667.1| 226|Caenorhabditis elegans Hypothetical pr... 33 0.27
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 32 0.36
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 31 1.1
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 30 1.4
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 30 1.4
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 30 1.4
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 30 1.4
AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical ... 30 1.4
Z73102-6|CAA97412.1| 522|Caenorhabditis elegans Hypothetical pr... 30 1.9
U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t pro... 29 2.5
Z83239-9|CAB05811.1| 517|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z81099-4|CAB03189.1| 517|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 29 4.4
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 29 4.4
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 29 4.4
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr... 28 5.8
U61953-3|AAC48071.3| 491|Caenorhabditis elegans Hypothetical pr... 28 5.8
U00025-4|AAN65312.1| 606|Caenorhabditis elegans Hypothetical pr... 28 5.8
U00025-3|AAA50619.1| 804|Caenorhabditis elegans Hypothetical pr... 28 5.8
AB110824-1|BAD80739.1| 606|Caenorhabditis elegans chondroitin p... 28 5.8
AB110823-1|BAD80738.1| 804|Caenorhabditis elegans chondroitin p... 28 5.8
U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical pr... 28 7.7
AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical ... 28 7.7
>AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical
protein F09G2.9 protein.
Length = 415
Score = 35.9 bits (79), Expect = 0.029
Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Frame = +3
Query: 420 KSSEIPDAEAKSADIKV-----EEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADS 584
KS E P E K ++ V +EPAA E+ K + V E KEE P++ +E D
Sbjct: 126 KSEEAPAPEEKKSEEVVAAEEKKEPAAVVEEKKEVPETPVVEDKKEEAPAS--SEEKKDE 183
Query: 585 AAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAP 692
+ K AP + ++ A E K E AP
Sbjct: 184 PVVNTEEKKDAAEAPAADEESEAAEE-KVAETTVAP 218
>AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein.
Length = 691
Score = 35.5 bits (78), Expect = 0.038
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 4/99 (4%)
Frame = +3
Query: 417 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 596
A + P A SA + A+ P+ EVQ V + S SA +E S SA +
Sbjct: 50 AADAPAPGAPEASAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEV 108
Query: 597 PNMVKKIDLAPTVES----DAAAIPEIKTPEAADAPKLA 701
P + D +S DA+A + PEA +AP++A
Sbjct: 109 PGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEIA 147
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = +3
Query: 492 EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKT 671
+D T V ++ ++E + E + AA P AP E+ A+ P+ +
Sbjct: 19 DDDDTPEPILVIDMDEDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEA 78
Query: 672 PEAADAPKLADNP 710
PE D P + P
Sbjct: 79 PEVQDVPDSSGAP 91
>AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein.
Length = 728
Score = 35.5 bits (78), Expect = 0.038
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 4/99 (4%)
Frame = +3
Query: 417 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 596
A + P A SA + A+ P+ EVQ V + S SA +E S SA +
Sbjct: 87 AADAPAPGAPEASAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEV 145
Query: 597 PNMVKKIDLAPTVES----DAAAIPEIKTPEAADAPKLA 701
P + D +S DA+A + PEA +AP++A
Sbjct: 146 PGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEIA 184
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = +3
Query: 492 EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKT 671
+D T V ++ ++E + E + AA P AP E+ A+ P+ +
Sbjct: 56 DDDDTPEPILVIDMDEDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEA 115
Query: 672 PEAADAPKLADNP 710
PE D P + P
Sbjct: 116 PEVQDVPDSSGAP 128
>AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform b protein.
Length = 512
Score = 35.5 bits (78), Expect = 0.038
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 4/99 (4%)
Frame = +3
Query: 417 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 596
A + P A SA + A+ P+ EVQ V + S SA +E S SA +
Sbjct: 87 AADAPAPGAPEASAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEV 145
Query: 597 PNMVKKIDLAPTVES----DAAAIPEIKTPEAADAPKLA 701
P + D +S DA+A + PEA +AP++A
Sbjct: 146 PGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEIA 184
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = +3
Query: 492 EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKT 671
+D T V ++ ++E + E + AA P AP E+ A+ P+ +
Sbjct: 56 DDDDTPEPILVIDMDEDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEA 115
Query: 672 PEAADAPKLADNP 710
PE D P + P
Sbjct: 116 PEVQDVPDSSGAP 128
>AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform a protein.
Length = 728
Score = 35.5 bits (78), Expect = 0.038
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 4/99 (4%)
Frame = +3
Query: 417 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 596
A + P A SA + A+ P+ EVQ V + S SA +E S SA +
Sbjct: 87 AADAPAPGAPEASAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEV 145
Query: 597 PNMVKKIDLAPTVES----DAAAIPEIKTPEAADAPKLA 701
P + D +S DA+A + PEA +AP++A
Sbjct: 146 PGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEIA 184
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = +3
Query: 492 EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKT 671
+D T V ++ ++E + E + AA P AP E+ A+ P+ +
Sbjct: 56 DDDDTPEPILVIDMDEDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEA 115
Query: 672 PEAADAPKLADNP 710
PE D P + P
Sbjct: 116 PEVQDVPDSSGAP 128
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 34.3 bits (75), Expect = 0.088
Identities = 37/143 (25%), Positives = 54/143 (37%), Gaps = 5/143 (3%)
Frame = +3
Query: 297 SNDEVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEE 476
+++ PA EA D A ++ A A SS +P+ A E
Sbjct: 504 ASEPAPAPIEAPATDAATLETAPAPAAEPAPAAEAAAGYDAPSS-VPEETPAPAPAADET 562
Query: 477 PAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKID----LAPTVESD 644
PA P +T A AE + P+A + +A +A P D AP E
Sbjct: 563 PAPAPAAEETPAPAPAAEETPAPAPAAEETPATAPAAEETPAPAPAADETPAPAPAAEET 622
Query: 645 AAAIPEI-KTPEAADAPKLADNP 710
A P + +TP A AP + + P
Sbjct: 623 PAPAPAVEETP--APAPAVEETP 643
Score = 29.1 bits (62), Expect = 3.3
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = +3
Query: 417 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSA--TDAEGSADSAA 590
A+++E A A +A+ E PA+ P +T A AE + P+A T A + +AA
Sbjct: 684 AQAAEETPAPAPAAE---ETPASAPAAEETPAPAPAAEEAPAPAPAAPETPAPAAEGAAA 740
Query: 591 IIPNMVKKIDLAPTVESDAAAIPEIKTPEAADA 689
P + D A + ++ A+ + +A+ A
Sbjct: 741 PAPIVSSGYDAAQSTDTVVASSAPATSSDASGA 773
Score = 27.9 bits (59), Expect = 7.7
Identities = 22/86 (25%), Positives = 30/86 (34%)
Frame = +3
Query: 435 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 614
P E A E P + E A VAE + P+A + A +A P
Sbjct: 637 PAVEETPAPAPAAEETPAPAPAAAEYAAPVAEETPAPAPAAEETPAPAQAAEETPAPAPA 696
Query: 615 IDLAPTVESDAAAIPEIKTPEAADAP 692
+ P + AA P A +AP
Sbjct: 697 AEETP-ASAPAAEETPAPAPAAEEAP 721
>Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical
protein F52H3.7a protein.
Length = 1245
Score = 33.9 bits (74), Expect = 0.12
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Frame = +3
Query: 441 AEAKSADIKVEEPAAQPEDSKTEVQ----ATVAEISKEEKPSATDAEGSADSAAIIPNMV 608
A A+SA VEE AA E ++ V+ AT A S E+P A +A+S P
Sbjct: 610 APAESAPASVEE-AAPSESTQAPVEEHKDATTAADSSHEEPKAESDAPAAESVETAPVEE 668
Query: 609 KKIDLAPT-VES--DAAAIPEIKTPEAADAP 692
K + +PT +ES D + + E+A AP
Sbjct: 669 HKDEASPTALESVEDVIEAVHVASTESAPAP 699
>U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical
protein H03E18.1 protein.
Length = 1147
Score = 33.5 bits (73), Expect = 0.15
Identities = 24/84 (28%), Positives = 36/84 (42%)
Frame = +3
Query: 441 AEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKID 620
AE K D K E P +P+ + E + +KP +T + + +AA K+
Sbjct: 341 AEKKKPDTKKETPTKKPKVELVTAKTVEGEKKETKKPKSTTKKPTKTAAA----STKR-- 394
Query: 621 LAPTVESDAAAIPEIKTPEAADAP 692
PT E A E+K+ AA P
Sbjct: 395 -PPTTEKPTATTEEVKSTTAAAKP 417
>U80442-4|AAB37667.1| 226|Caenorhabditis elegans Hypothetical
protein T20F5.5 protein.
Length = 226
Score = 32.7 bits (71), Expect = 0.27
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +3
Query: 450 KSADIKVEEPAAQPEDSK-TEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLA 626
KSA K+ P+ + ED++ T+ A+ E S + KP T E SAD + ++ + LA
Sbjct: 66 KSASKKLRVPSKESEDTQPTKSDASQTEKSTK-KPPVTLVESSADVTTAVESISSQQQLA 124
Query: 627 PTVESDAAAIPEIKTPEAADAP 692
P AA + + +A+ AP
Sbjct: 125 P-----AAPVAPPQLTQASPAP 141
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 32.3 bits (70), Expect = 0.36
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 465 KVEEPAAQP-EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVES 641
K+EE A + E+ K ++Q+ A D S D +IP VK I PT+
Sbjct: 435 KLEEHAVKKLEEEKDKLQSAAAPEDDSPASPPMDCPASPDMVPVIPQTVKIIPTVPTIPL 494
Query: 642 DAAAIPEIKTPEA 680
+ + +++ P A
Sbjct: 495 ETQDV-DMREPSA 506
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/101 (25%), Positives = 37/101 (36%), Gaps = 1/101 (0%)
Frame = +3
Query: 417 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 596
AK P E+ + PA +P D + A A K + + G ADS
Sbjct: 549 AKKDPAPAKESLKPKADTKAPA-KPRDPSPKKVAPTAPEKKTPVLAKKEPAGPADSKTKE 607
Query: 597 PNMVKKIDLAPTVESDAAAIPEIK-TPEAADAPKLADNPVD 716
P K D +P A +P+ + P A P+ P D
Sbjct: 608 PEKSKPRDPSPKKAVPAKPVPKTEVAPAAVKKPEPISKPKD 648
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Frame = +3
Query: 435 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEIS----KEEKPSATDAEGSADSAAIIPN 602
P + KS + E+PA+ + KT ++ E+ KE+ PS+ + +S P
Sbjct: 1791 PTKKEKSPEKVEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDESKEKSPE 1850
Query: 603 MVKKIDLAPTVESDAAAIPEIKTPEAADAPK 695
++ +PT + P+ K ++ +A K
Sbjct: 1851 KPEEKPKSPTPKKSPPGSPKKKKSKSPEAEK 1881
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/97 (23%), Positives = 44/97 (45%)
Frame = +3
Query: 420 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 599
K S PD + KS + E+PA+ + + EV++ KE+ P++ + + +A +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428
Query: 600 NMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNP 710
+ KK + +P+ + P T + D K P
Sbjct: 1429 SPTKK-EKSPSSPTKKEKSPSSPTKKTGDEVKEKSPP 1464
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Frame = +3
Query: 435 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEIS----KEEKPSATDAEGSADSAAIIPN 602
P + KS + E+PA+ + KT ++ E+ KE+ PS+ + +S P
Sbjct: 1791 PTKKEKSPEKVEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDESKEKSPE 1850
Query: 603 MVKKIDLAPTVESDAAAIPEIKTPEAADAPK 695
++ +PT + P+ K ++ +A K
Sbjct: 1851 KPEEKPKSPTPKKSPPGSPKKKKSKSPEAEK 1881
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/97 (23%), Positives = 44/97 (45%)
Frame = +3
Query: 420 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 599
K S PD + KS + E+PA+ + + EV++ KE+ P++ + + +A +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428
Query: 600 NMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNP 710
+ KK + +P+ + P T + D K P
Sbjct: 1429 SPTKK-EKSPSSPTKKEKSPSSPTKKTGDEVKEKSPP 1464
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Frame = +3
Query: 435 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEIS----KEEKPSATDAEGSADSAAIIPN 602
P + KS + E+PA+ + KT ++ E+ KE+ PS+ + +S P
Sbjct: 1791 PTKKEKSPEKVEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDESKEKSPE 1850
Query: 603 MVKKIDLAPTVESDAAAIPEIKTPEAADAPK 695
++ +PT + P+ K ++ +A K
Sbjct: 1851 KPEEKPKSPTPKKSPPGSPKKKKSKSPEAEK 1881
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/97 (23%), Positives = 44/97 (45%)
Frame = +3
Query: 420 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 599
K S PD + KS + E+PA+ + + EV++ KE+ P++ + + +A +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428
Query: 600 NMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNP 710
+ KK + +P+ + P T + D K P
Sbjct: 1429 SPTKK-EKSPSSPTKKEKSPSSPTKKTGDEVKEKSPP 1464
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Frame = +3
Query: 435 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEIS----KEEKPSATDAEGSADSAAIIPN 602
P + KS + E+PA+ + KT ++ E+ KE+ PS+ + +S P
Sbjct: 1791 PTKKEKSPEKVEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDESKEKSPE 1850
Query: 603 MVKKIDLAPTVESDAAAIPEIKTPEAADAPK 695
++ +PT + P+ K ++ +A K
Sbjct: 1851 KPEEKPKSPTPKKSPPGSPKKKKSKSPEAEK 1881
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/97 (23%), Positives = 44/97 (45%)
Frame = +3
Query: 420 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 599
K S PD + KS + E+PA+ + + EV++ KE+ P++ + + +A +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428
Query: 600 NMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNP 710
+ KK + +P+ + P T + D K P
Sbjct: 1429 SPTKK-EKSPSSPTKKEKSPSSPTKKTGDEVKEKSPP 1464
>AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical
protein F54A3.6 protein.
Length = 470
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +3
Query: 468 VEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 614
VEEP P KT + A + PSA + GS+ + N +KK
Sbjct: 235 VEEPIPPPNTRKTLLGEPPAGAASSSSPSAQSSTGSSTGTSSYQNNIKK 283
>Z73102-6|CAA97412.1| 522|Caenorhabditis elegans Hypothetical
protein B0035.5 protein.
Length = 522
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +3
Query: 543 EKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPK 695
EKP++ +AE D + K ++L V A PE PEA+ K
Sbjct: 280 EKPASLNAEDIRDEKVKVLKAAKVVELKDVVVGQYIASPEFDHPEASQGYK 330
>U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t
protein 2, isoform a protein.
Length = 428
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +3
Query: 417 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSA 578
A+ E +A A+ A + EEP A E++ E + +EEKP A E A
Sbjct: 21 AEEVEEEEAAAEDAAAEEEEPEAAEEEAPVEEKPKPRPPVQEEKPPAEMTEAEA 74
>Z83239-9|CAB05811.1| 517|Caenorhabditis elegans Hypothetical
protein K08F9.4 protein.
Length = 517
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 486 QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 629
+ E+ + E+Q A+ S+ E PS++ S+DS + KK +AP
Sbjct: 24 EEEEEEEEIQPGPADSSESENPSSSSDSSSSDSDSDSDAAPKKNIIAP 71
>Z81099-4|CAB03189.1| 517|Caenorhabditis elegans Hypothetical
protein K08F9.4 protein.
Length = 517
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 486 QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 629
+ E+ + E+Q A+ S+ E PS++ S+DS + KK +AP
Sbjct: 24 EEEEEEEEIQPGPADSSESENPSSSSDSSSSDSDSDSDAAPKKNIIAP 71
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 28.7 bits (61), Expect = 4.4
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +3
Query: 444 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 623
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 224 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 278
Query: 624 APTVESDAAAIPEIKTP 674
AP V ++ ++ E TP
Sbjct: 279 AP-VSTNKSSDDEPSTP 294
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.7 bits (61), Expect = 4.4
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +3
Query: 444 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 623
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 763 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 817
Query: 624 APTVESDAAAIPEIKTP 674
AP V ++ ++ E TP
Sbjct: 818 AP-VSTNKSSDDEPSTP 833
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 28.7 bits (61), Expect = 4.4
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +3
Query: 444 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 623
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 224 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 278
Query: 624 APTVESDAAAIPEIKTP 674
AP V ++ ++ E TP
Sbjct: 279 AP-VSTNKSSDDEPSTP 294
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.7 bits (61), Expect = 4.4
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +3
Query: 444 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 623
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 763 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 817
Query: 624 APTVESDAAAIPEIKTP 674
AP V ++ ++ E TP
Sbjct: 818 AP-VSTNKSSDDEPSTP 833
>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
B0207.5 protein.
Length = 3279
Score = 28.3 bits (60), Expect = 5.8
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
Frame = +3
Query: 420 KSSEIPDAEAKSADIKV--------EEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGS 575
K SEIPD + +KV E+P + PE+S+ E ++K++K + S
Sbjct: 2869 KGSEIPDEDENGESVKVMKRKEYQIEKPQSMPEESEDE---EFKLLTKKKKMGVIANDPS 2925
Query: 576 ADSAAIIPNMVKK 614
D + II KK
Sbjct: 2926 NDGSEIIKMSKKK 2938
>U61953-3|AAC48071.3| 491|Caenorhabditis elegans Hypothetical
protein R08C7.5 protein.
Length = 491
Score = 28.3 bits (60), Expect = 5.8
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +3
Query: 429 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMV 608
E P A+ + +K+ + P+ KT VA+ KE+KP + +A A I +V
Sbjct: 314 EKPTAKTAAPPVKLLTSSPPPKIPKT-----VAQPPKEKKPVMESVKTAAPPAKEIKPIV 368
Query: 609 KKIDLAPTVESDAAAIP-EIKTPEAADA 689
KI T ++ A+P E+K +AA A
Sbjct: 369 AKI----TEKAAEPAVPKEVKPAKAATA 392
>U00025-4|AAN65312.1| 606|Caenorhabditis elegans Hypothetical
protein PAR2.4b protein.
Length = 606
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 150 VSLAMPVAEEKDVVPAQPIL 209
V++ +PVA EKDV+PA+ +L
Sbjct: 317 VTVVIPVASEKDVLPARKLL 336
>U00025-3|AAA50619.1| 804|Caenorhabditis elegans Hypothetical
protein PAR2.4a protein.
Length = 804
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 150 VSLAMPVAEEKDVVPAQPIL 209
V++ +PVA EKDV+PA+ +L
Sbjct: 515 VTVVIPVASEKDVLPARKLL 534
>AB110824-1|BAD80739.1| 606|Caenorhabditis elegans chondroitin
polymerizing factor-S protein.
Length = 606
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 150 VSLAMPVAEEKDVVPAQPIL 209
V++ +PVA EKDV+PA+ +L
Sbjct: 317 VTVVIPVASEKDVLPARKLL 336
>AB110823-1|BAD80738.1| 804|Caenorhabditis elegans chondroitin
polymerizing factor protein.
Length = 804
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 150 VSLAMPVAEEKDVVPAQPIL 209
V++ +PVA EKDV+PA+ +L
Sbjct: 515 VTVVIPVASEKDVLPARKLL 534
>U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical
protein C53C9.2 protein.
Length = 397
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 429 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAE 569
E + E + + K+EEPAA+ E+ + E + E EE+ + E
Sbjct: 347 EPEEEEEEEEEEKIEEPAAKEEEEEEEEEEEEEEEELEEEEEEEEEE 393
>AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical
protein C09E7.7 protein.
Length = 995
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 436 PMLKQNLLILKWKNQLLSLKIQKLKYKLPSLKFQ 537
P L N+LI WK + K ++ KY + LK Q
Sbjct: 199 PKLSLNVLISMWKKEFSDWKDEEFKYFIDFLKSQ 232
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,176,152
Number of Sequences: 27780
Number of extensions: 202769
Number of successful extensions: 840
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -